RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 NUTM2BA6NNL0 878 aaPredicted RBP16.45■□□□□ 0.22
SSX3-204ENST00000612497 NUTM2EB1AL46 878 aaPredicted RBP16.45■□□□□ 0.22
SSX3-204ENST00000612497 NUTM2AQ8IVF1 878 aaPredicted RBP16.45■□□□□ 0.22
SSX3-204ENST00000612497 CDK12Q9NYV4 1490 aaPredicted RBP16.45■□□□□ 0.22
SSX3-204ENST00000612497 SHPRHQ149N8 1683 aa16.45■□□□□ 0.22
SSX3-204ENST00000612497 CHD2O14647 1828 aaKnown RBP16.43■□□□□ 0.22
SSX3-204ENST00000612497 KANK1Q14678 1352 aa16.42■□□□□ 0.22
SSX3-204ENST00000612497 KIF15Q9NS87 1388 aa16.41■□□□□ 0.22
SSX3-204ENST00000612497 RRP7BPQ9NSQ0 103 aa16.41■□□□□ 0.22
SSX3-204ENST00000612497 AFF2P51816 1311 aa16.41■□□□□ 0.22
SSX3-204ENST00000612497 AHDC1Q5TGY3 1603 aaPredicted RBP16.41■□□□□ 0.22
SSX3-204ENST00000612497 ERBINQ96RT1 1412 aa16.39■□□□□ 0.21
SSX3-204ENST00000612497 ATF3P18847 181 aa16.39■□□□□ 0.21
SSX3-204ENST00000612497 CADPS2Q86UW7 1296 aa16.39■□□□□ 0.21
SSX3-204ENST00000612497 ADGRB3O60242 1522 aa16.39■□□□□ 0.21
SSX3-204ENST00000612497 PPP1R15AO75807 674 aaPredicted RBP16.38■□□□□ 0.21
SSX3-204ENST00000612497 NUTM2DQ5VT03 806 aaPredicted RBP16.38■□□□□ 0.21
SSX3-204ENST00000612497 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.37■□□□□ 0.21
SSX3-204ENST00000612497 MYOM3Q5VTT5 1437 aa16.36■□□□□ 0.21
SSX3-204ENST00000612497 NCOA3Q9Y6Q9 1424 aa16.36■□□□□ 0.21
SSX3-204ENST00000612497 C19orf44Q9H6X5 657 aa16.36■□□□□ 0.21
SSX3-204ENST00000612497 PLEKHG1Q9ULL1 1385 aa16.36■□□□□ 0.21
SSX3-204ENST00000612497 RGS12O14924 1447 aa16.36■□□□□ 0.21
SSX3-204ENST00000612497 RBM6P78332 1123 aaKnown RBP16.35■□□□□ 0.21
SSX3-204ENST00000612497 QTRT2Q9H974 415 aaKnown RBP16.35■□□□□ 0.21
SSX3-204ENST00000612497 SLC52A1Q9NWF4 448 aa16.35■□□□□ 0.21
SSX3-204ENST00000612497 MYO5BQ9ULV0 1848 aa16.34■□□□□ 0.21
SSX3-204ENST00000612497 HDGFP51858 240 aaKnown RBP16.34■□□□□ 0.21
SSX3-204ENST00000612497 NOS1P29475 1434 aa16.34■□□□□ 0.21
SSX3-204ENST00000612497 DIP2AQ14689 1571 aa16.34■□□□□ 0.21
SSX3-204ENST00000612497 BRINP3Q76B58 766 aa16.33■□□□□ 0.2
SSX3-204ENST00000612497 C8orf37Q96NL8 207 aa16.33■□□□□ 0.2
SSX3-204ENST00000612497 ZRANB1Q9UGI0 708 aa16.33■□□□□ 0.2
SSX3-204ENST00000612497 TBX22Q9Y458 520 aa16.33■□□□□ 0.2
SSX3-204ENST00000612497 LMTK2Q8IWU2 1503 aa16.32■□□□□ 0.2
SSX3-204ENST00000612497 ZFYVE9O95405 1425 aa16.31■□□□□ 0.2
SSX3-204ENST00000612497 RIMS2Q9UQ26 1411 aa16.31■□□□□ 0.2
SSX3-204ENST00000612497 CROCC2H7BZ55 1655 aa16.3■□□□□ 0.2
SSX3-204ENST00000612497 ABCC5O15440 1437 aa16.29■□□□□ 0.2
SSX3-204ENST00000612497 ATAD2Q6PL18 1390 aa16.29■□□□□ 0.2
SSX3-204ENST00000612497 NGLY1Q96IV0 654 aa16.29■□□□□ 0.2
SSX3-204ENST00000612497 GCC2Q8IWJ2 1684 aa16.28■□□□□ 0.2
SSX3-204ENST00000612497 LRRC59Q96AG4 307 aaKnown RBP16.28■□□□□ 0.2
SSX3-204ENST00000612497 SETD5Q9C0A6 1442 aa16.28■□□□□ 0.2
SSX3-204ENST00000612497 KANK4Q5T7N3 995 aaPredicted RBP16.27■□□□□ 0.2
SSX3-204ENST00000612497 ASXL1Q8IXJ9 1541 aa16.26■□□□□ 0.19
SSX3-204ENST00000612497 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.26■□□□□ 0.19
SSX3-204ENST00000612497 SETBP1Q9Y6X0 1596 aa16.26■□□□□ 0.19
SSX3-204ENST00000612497 CHGAP10645 457 aaKnown RBP16.25■□□□□ 0.19
SSX3-204ENST00000612497 CHIC2Q9UKJ5 165 aa16.25■□□□□ 0.19
SSX3-204ENST00000612497 TMEM131LA2VDJ0 1609 aa16.24■□□□□ 0.19
SSX3-204ENST00000612497 ADAMTS2O95450 1211 aa16.24■□□□□ 0.19
SSX3-204ENST00000612497 AMOTL2Q9Y2J4 779 aa16.24■□□□□ 0.19
SSX3-204ENST00000612497 ADAMTS13Q76LX8 1427 aa16.24■□□□□ 0.19
SSX3-204ENST00000612497 PIK3R4Q99570 1358 aa16.24■□□□□ 0.19
SSX3-204ENST00000612497 NHSL1Q5SYE7 1610 aa16.23■□□□□ 0.19
SSX3-204ENST00000612497 DAPK1P53355 1430 aa16.23■□□□□ 0.19
SSX3-204ENST00000612497 ANKRD30AQ9BXX3 1397 aa16.23■□□□□ 0.19
SSX3-204ENST00000612497 DDX17Q92841 729 aaKnown RBP16.22■□□□□ 0.19
SSX3-204ENST00000612497 PNPLA6Q8IY17 1366 aa16.22■□□□□ 0.19
SSX3-204ENST00000612497 RPRD2Q5VT52 1461 aaKnown RBP16.22■□□□□ 0.19
SSX3-204ENST00000612497 EP400Q96L91 3159 aa16.22■□□□□ 0.19
SSX3-204ENST00000612497 DCCP43146 1447 aa16.21■□□□□ 0.19
SSX3-204ENST00000612497 PTPN23Q9H3S7 1636 aa16.21■□□□□ 0.19
SSX3-204ENST00000612497 USP21Q9UK80 565 aa16.2■□□□□ 0.18
SSX3-204ENST00000612497 MST1RQ04912 1400 aa16.19■□□□□ 0.18
SSX3-204ENST00000612497 TRPM2O94759 1503 aa16.19■□□□□ 0.18
SSX3-204ENST00000612497 TRPC5Q9UL62 973 aaPredicted RBP16.19■□□□□ 0.18
SSX3-204ENST00000612497 PTPRUQ92729 1446 aa16.19■□□□□ 0.18
SSX3-204ENST00000612497 VPS8Q8N3P4 1428 aa16.18■□□□□ 0.18
SSX3-204ENST00000612497 CCDC125Q86Z20 511 aa16.17■□□□□ 0.18
SSX3-204ENST00000612497 UNC13BO14795 1591 aa16.13■□□□□ 0.17
SSX3-204ENST00000612497 XRN1Q8IZH2 1706 aaKnown RBP16.12■□□□□ 0.17
SSX3-204ENST00000612497 FNBP4Q8N3X1 1017 aaPredicted RBP16.12■□□□□ 0.17
SSX3-204ENST00000612497 ATRNO75882 1429 aa16.11■□□□□ 0.17
SSX3-204ENST00000612497 ANKRD50Q9ULJ7 1429 aa16.1■□□□□ 0.17
SSX3-204ENST00000612497 PTCH1Q13635 1447 aa16.09■□□□□ 0.17
SSX3-204ENST00000612497 ADGRL3Q9HAR2 1447 aa16.09■□□□□ 0.17
SSX3-204ENST00000612497 PIAS4Q8N2W9 510 aaPredicted RBP16.07■□□□□ 0.16
SSX3-204ENST00000612497 E9PCH4 1651 aa16.07■□□□□ 0.16
SSX3-204ENST00000612497 NALCNQ8IZF0 1738 aa16.07■□□□□ 0.16
SSX3-204ENST00000612497 NRXN3Q9Y4C0 1643 aa16.06■□□□□ 0.16
SSX3-204ENST00000612497 ADGRL2O95490 1459 aa16.06■□□□□ 0.16
SSX3-204ENST00000612497 C1orf167Q5SNV9 1468 aa16.06■□□□□ 0.16
SSX3-204ENST00000612497 SOS2Q07890 1332 aaPredicted RBP16.06■□□□□ 0.16
SSX3-204ENST00000612497 METP08581 1390 aa16.05■□□□□ 0.16
SSX3-204ENST00000612497 BLMP54132 1417 aaPredicted RBP16.04■□□□□ 0.16
SSX3-204ENST00000612497 APLP2Q06481 763 aa16.04■□□□□ 0.16
SSX3-204ENST00000612497 DEFB132Q7Z7B7 95 aa16.04■□□□□ 0.16
SSX3-204ENST00000612497 GJD4Q96KN9 370 aaPredicted RBP16.04■□□□□ 0.16
SSX3-204ENST00000612497 ORAI2Q96SN7 254 aa16.04■□□□□ 0.16
SSX3-204ENST00000612497 LAMC1P11047 1609 aa16.04■□□□□ 0.16
SSX3-204ENST00000612497 LRP5O75197 1615 aa16.03■□□□□ 0.16
SSX3-204ENST00000612497 SF3B2Q13435 895 aaKnown RBP16.02■□□□□ 0.16
SSX3-204ENST00000612497 ZNF326Q5BKZ1 582 aaKnown RBP16.02■□□□□ 0.16
SSX3-204ENST00000612497 BCL9LQ86UU0 1499 aa16.02■□□□□ 0.15
SSX3-204ENST00000612497 FAM50AQ14320 339 aaKnown RBP16.01■□□□□ 0.15
SSX3-204ENST00000612497 COL22A1Q8NFW1 1626 aaPredicted RBP16.01■□□□□ 0.15
SSX3-204ENST00000612497 MARF1Q9Y4F3 1742 aaKnown RBP16■□□□□ 0.15
SSX3-204ENST00000612497 IQGAP3Q86VI3 1631 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms