RNA–Protein interactions for RNA: ENST00000612438.1

LINC00547-201, long intergenic non-protein coding RNA 547, humanhuman

TSL 2 BASIC

Gene LINC00547, Length 3,314 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00547-201ENST00000612438 TESK2Q96S53 571 aa11.31□□□□□ -0.6
LINC00547-201ENST00000612438 COL17A1Q9UMD9 1497 aaPredicted RBP11.3□□□□□ -0.6
LINC00547-201ENST00000612438 PANK3Q9H999 370 aa11.3□□□□□ -0.6
LINC00547-201ENST00000612438 ATP10BO94823 1461 aa11.3□□□□□ -0.6
LINC00547-201ENST00000612438 FAM135AQ9P2D6 1515 aa11.3□□□□□ -0.6
LINC00547-201ENST00000612438 CCDC144AA2RUR9 1427 aa11.29□□□□□ -0.6
LINC00547-201ENST00000612438 ARHGEF5Q12774 1597 aa11.29□□□□□ -0.6
LINC00547-201ENST00000612438 PLEKHH2Q8IVE3 1493 aa11.29□□□□□ -0.6
LINC00547-201ENST00000612438 DISP3Q9P2K9 1392 aa11.29□□□□□ -0.6
LINC00547-201ENST00000612438 RGL3Q3MIN7 710 aa11.29□□□□□ -0.6
LINC00547-201ENST00000612438 SKAP1Q86WV1 359 aa11.29□□□□□ -0.6
LINC00547-201ENST00000612438 ABCA8O94911 1581 aa11.28□□□□□ -0.6
LINC00547-201ENST00000612438 KDM2BQ8NHM5 1336 aa11.28□□□□□ -0.6
LINC00547-201ENST00000612438 SMAP1Q8IYB5 467 aaPredicted RBP11.28□□□□□ -0.6
LINC00547-201ENST00000612438 C20orf194Q5TEA3 1177 aa11.27□□□□□ -0.61
LINC00547-201ENST00000612438 SYNJ2O15056 1496 aa11.27□□□□□ -0.61
LINC00547-201ENST00000612438 PLA2R1Q13018 1463 aa11.27□□□□□ -0.61
LINC00547-201ENST00000612438 LAMC1P11047 1609 aa11.27□□□□□ -0.61
LINC00547-201ENST00000612438 ERBINQ96RT1 1412 aa11.27□□□□□ -0.61
LINC00547-201ENST00000612438 A2MP01023 1474 aa11.27□□□□□ -0.61
LINC00547-201ENST00000612438 PRDM15P57071 1507 aaPredicted RBP11.27□□□□□ -0.61
LINC00547-201ENST00000612438 TMF1P82094 1093 aa11.26□□□□□ -0.61
LINC00547-201ENST00000612438 ADAMTS8Q9UP79 889 aa11.26□□□□□ -0.61
LINC00547-201ENST00000612438 DHX37Q8IY37 1157 aaKnown RBP11.25□□□□□ -0.61
LINC00547-201ENST00000612438 MAP7D2Q96T17 732 aa11.25□□□□□ -0.61
LINC00547-201ENST00000612438 NUP160Q12769 1436 aa11.25□□□□□ -0.61
LINC00547-201ENST00000612438 CCDC141Q6ZP82 1450 aa11.25□□□□□ -0.61
LINC00547-201ENST00000612438 FRAT2O75474 233 aaPredicted RBP11.25□□□□□ -0.61
LINC00547-201ENST00000612438 CENPQQ7L2Z9 268 aaPredicted RBP11.25□□□□□ -0.61
LINC00547-201ENST00000612438 FTSJ3Q8IY81 847 aaKnown RBP11.25□□□□□ -0.61
LINC00547-201ENST00000612438 DUSP27Q5VZP5 1158 aa11.24□□□□□ -0.61
LINC00547-201ENST00000612438 CHMP4AQ9BY43 222 aa11.23□□□□□ -0.61
LINC00547-201ENST00000612438 ZNF521Q96K83 1311 aa11.22□□□□□ -0.61
LINC00547-201ENST00000612438 FAM161AQ3B820 660 aa11.22□□□□□ -0.61
LINC00547-201ENST00000612438 ZHX1Q9UKY1 873 aaPredicted RBP11.22□□□□□ -0.61
LINC00547-201ENST00000612438 SAMD9LQ8IVG5 1584 aa11.22□□□□□ -0.61
LINC00547-201ENST00000612438 PLEKHH1Q9ULM0 1364 aa11.22□□□□□ -0.61
LINC00547-201ENST00000612438 PPP2R1AP30153 589 aa11.21□□□□□ -0.61
LINC00547-201ENST00000612438 SLC4A3P48751 1232 aa11.21□□□□□ -0.61
LINC00547-201ENST00000612438 C8orf34Q49A92 452 aa11.21□□□□□ -0.61
LINC00547-201ENST00000612438 ZFP91Q96JP5 570 aaPredicted RBP11.21□□□□□ -0.62
LINC00547-201ENST00000612438 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.21□□□□□ -0.62
LINC00547-201ENST00000612438 EIF2AK4Q9P2K8 1649 aaKnown RBP11.21□□□□□ -0.62
LINC00547-201ENST00000612438 UNC13BO14795 1591 aa11.21□□□□□ -0.62
LINC00547-201ENST00000612438 GOLGA2Q08379 1002 aa11.2□□□□□ -0.62
LINC00547-201ENST00000612438 WDR43Q15061 677 aaKnown RBP eCLIP11.2□□□□□ -0.62
LINC00547-201ENST00000612438 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.2□□□□□ -0.62
LINC00547-201ENST00000612438 TNNT2P45379 298 aaPredicted RBP11.2□□□□□ -0.62
LINC00547-201ENST00000612438 UTP14CQ5TAP6 766 aaKnown RBP11.2□□□□□ -0.62
LINC00547-201ENST00000612438 MAGI2Q86UL8 1455 aa11.19□□□□□ -0.62
LINC00547-201ENST00000612438 KNSTRNQ9Y448 316 aa11.19□□□□□ -0.62
LINC00547-201ENST00000612438 ATP10AO60312 1499 aa11.19□□□□□ -0.62
LINC00547-201ENST00000612438 WDR7Q9Y4E6 1490 aa11.19□□□□□ -0.62
LINC00547-201ENST00000612438 TEX2Q8IWB9 1127 aa11.19□□□□□ -0.62
LINC00547-201ENST00000612438 CDC42BPBQ9Y5S2 1711 aa11.19□□□□□ -0.62
LINC00547-201ENST00000612438 AMER1Q5JTC6 1135 aaPredicted RBP11.19□□□□□ -0.62
LINC00547-201ENST00000612438 SLFN5Q08AF3 891 aa11.18□□□□□ -0.62
LINC00547-201ENST00000612438 MAST1Q9Y2H9 1570 aa11.18□□□□□ -0.62
LINC00547-201ENST00000612438 TRMT2AQ8IZ69 625 aaKnown RBP11.18□□□□□ -0.62
LINC00547-201ENST00000612438 PREX2Q70Z35 1606 aa11.18□□□□□ -0.62
LINC00547-201ENST00000612438 IQGAP3Q86VI3 1631 aa11.17□□□□□ -0.62
LINC00547-201ENST00000612438 PLCD3Q8N3E9 789 aa11.17□□□□□ -0.62
LINC00547-201ENST00000612438 TMEM51Q9NW97 253 aa11.17□□□□□ -0.62
LINC00547-201ENST00000612438 MYO5CQ9NQX4 1742 aa11.17□□□□□ -0.62
LINC00547-201ENST00000612438 POGKQ9P215 609 aa11.16□□□□□ -0.62
LINC00547-201ENST00000612438 ESPNB1AK53 854 aa11.16□□□□□ -0.62
LINC00547-201ENST00000612438 CLASP1Q7Z460 1538 aa11.16□□□□□ -0.62
LINC00547-201ENST00000612438 SYCP2Q9BX26 1530 aa11.16□□□□□ -0.62
LINC00547-201ENST00000612438 RNF17Q9BXT8 1623 aaKnown RBP11.15□□□□□ -0.62
LINC00547-201ENST00000612438 ZNF830Q96NB3 372 aaPredicted RBP11.15□□□□□ -0.62
LINC00547-201ENST00000612438 GOLGA6L3A6NEY3 463 aa11.15□□□□□ -0.62
LINC00547-201ENST00000612438 DMTNQ08495 405 aa11.15□□□□□ -0.62
LINC00547-201ENST00000612438 PPP4R3BQ5MIZ7 849 aa11.15□□□□□ -0.62
LINC00547-201ENST00000612438 PIK3C2GO75747 1445 aa11.14□□□□□ -0.63
LINC00547-201ENST00000612438 XRCC6P12956 609 aaKnown RBP eCLIP11.14□□□□□ -0.63
LINC00547-201ENST00000612438 CDCA8Q53HL2 280 aa11.14□□□□□ -0.63
LINC00547-201ENST00000612438 MTERF4Q7Z6M4 381 aaKnown RBP11.14□□□□□ -0.63
LINC00547-201ENST00000612438 ANP32BQ92688 251 aaKnown RBP11.14□□□□□ -0.63
LINC00547-201ENST00000612438 EIF3AQ14152 1382 aaKnown RBP11.14□□□□□ -0.63
LINC00547-201ENST00000612438 ERCC6L2Q5T890 1561 aa11.13□□□□□ -0.63
LINC00547-201ENST00000612438 KIAA1211Q6ZU35 1233 aa11.13□□□□□ -0.63
LINC00547-201ENST00000612438 PLXNC1O60486 1568 aa11.13□□□□□ -0.63
LINC00547-201ENST00000612438 NPC1L1Q9UHC9 1359 aa11.13□□□□□ -0.63
LINC00547-201ENST00000612438 CHRM1P11229 460 aaPredicted RBP11.13□□□□□ -0.63
LINC00547-201ENST00000612438 SECISBP2LQ93073 1101 aaKnown RBP11.13□□□□□ -0.63
LINC00547-201ENST00000612438 ASXL1Q8IXJ9 1541 aa11.12□□□□□ -0.63
LINC00547-201ENST00000612438 SPINK5Q9NQ38 1064 aaPredicted RBP11.12□□□□□ -0.63
LINC00547-201ENST00000612438 ARHGAP5Q13017 1502 aa11.12□□□□□ -0.63
LINC00547-201ENST00000612438 DUOX2Q9NRD8 1548 aa11.12□□□□□ -0.63
LINC00547-201ENST00000612438 NKTRP30414 1462 aaKnown RBP11.11□□□□□ -0.63
LINC00547-201ENST00000612438 SYNMO15061 1565 aa11.11□□□□□ -0.63
LINC00547-201ENST00000612438 VGLL3A8MV65 326 aa11.11□□□□□ -0.63
LINC00547-201ENST00000612438 HOMEZQ8IX15 550 aa11.11□□□□□ -0.63
LINC00547-201ENST00000612438 CCDC146Q8IYE0 955 aa11.11□□□□□ -0.63
LINC00547-201ENST00000612438 APAF1O14727 1248 aa11.11□□□□□ -0.63
LINC00547-201ENST00000612438 BCAR3O75815 825 aa11.11□□□□□ -0.63
LINC00547-201ENST00000612438 IQGAP1P46940 1657 aa11.1□□□□□ -0.63
LINC00547-201ENST00000612438 E9PSI1 815 aa11.1□□□□□ -0.63
LINC00547-201ENST00000612438 KIF20AO95235 890 aa11.1□□□□□ -0.63
LINC00547-201ENST00000612438 TERF1P54274 439 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms