RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 RALGAPBQ86X10 1494 aa24.88■■□□□ 1.57
SREK1-216ENST00000612404 MYO3AQ8NEV4 1616 aa24.87■■□□□ 1.57
SREK1-216ENST00000612404 VGFO15240 615 aaPredicted RBP24.86■■□□□ 1.57
SREK1-216ENST00000612404 UBR1Q8IWV7 1749 aa24.86■■□□□ 1.57
SREK1-216ENST00000612404 TRPM1Q7Z4N2 1603 aa24.86■■□□□ 1.57
SREK1-216ENST00000612404 ROCK2O75116 1388 aaKnown RBP24.85■■□□□ 1.57
SREK1-216ENST00000612404 KDM5AP29375 1690 aaKnown RBP24.85■■□□□ 1.57
SREK1-216ENST00000612404 ZNF316A6NFI3 1004 aaPredicted RBP24.83■■□□□ 1.57
SREK1-216ENST00000612404 CARD11Q9BXL7 1154 aa24.83■■□□□ 1.57
SREK1-216ENST00000612404 NRXN1Q9ULB1 1477 aa24.83■■□□□ 1.57
SREK1-216ENST00000612404 RIMS2Q9UQ26 1411 aa24.82■■□□□ 1.56
SREK1-216ENST00000612404 NBPF1Q3BBV0 1214 aa24.82■■□□□ 1.56
SREK1-216ENST00000612404 SETD1BQ9UPS6 1966 aaKnown RBP24.81■■□□□ 1.56
SREK1-216ENST00000612404 EIF4G2P78344 907 aaKnown RBP eCLIP24.8■■□□□ 1.56
SREK1-216ENST00000612404 HIRIP3Q9BW71 556 aaPredicted RBP24.8■■□□□ 1.56
SREK1-216ENST00000612404 SENP3Q9H4L4 574 aaPredicted RBP24.8■■□□□ 1.56
SREK1-216ENST00000612404 ZFYVE9O95405 1425 aa24.8■■□□□ 1.56
SREK1-216ENST00000612404 KDM4FA0A1W2PPD8 638 aa24.79■■□□□ 1.56
SREK1-216ENST00000612404 PIK3C2GO75747 1445 aa24.79■■□□□ 1.56
SREK1-216ENST00000612404 CFAP70Q5T0N1 1121 aa24.79■■□□□ 1.56
SREK1-216ENST00000612404 CEP170BQ9Y4F5 1589 aaPredicted RBP24.79■■□□□ 1.56
SREK1-216ENST00000612404 TMEM2Q9UHN6 1383 aa24.78■■□□□ 1.56
SREK1-216ENST00000612404 HDGFP51858 240 aaKnown RBP24.77■■□□□ 1.56
SREK1-216ENST00000612404 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.77■■□□□ 1.56
SREK1-216ENST00000612404 HSPA5P11021 654 aaKnown RBP24.77■■□□□ 1.56
SREK1-216ENST00000612404 THEMISQ8N1K5 641 aaPredicted RBP24.77■■□□□ 1.56
SREK1-216ENST00000612404 KIAA1210Q9ULL0 1709 aa24.76■■□□□ 1.55
SREK1-216ENST00000612404 GPRASP1Q5JY77 1395 aa24.75■■□□□ 1.55
SREK1-216ENST00000612404 USP47Q96K76 1375 aa24.75■■□□□ 1.55
SREK1-216ENST00000612404 ZNF142P52746 1687 aaPredicted RBP24.73■■□□□ 1.55
SREK1-216ENST00000612404 C14orf93Q9H972 538 aaKnown RBP24.73■■□□□ 1.55
SREK1-216ENST00000612404 EID1Q9Y6B2 187 aa24.71■■□□□ 1.55
SREK1-216ENST00000612404 LAMC1P11047 1609 aa24.71■■□□□ 1.55
SREK1-216ENST00000612404 TXNDC2Q86VQ3 553 aa24.7■■□□□ 1.54
SREK1-216ENST00000612404 SLIT1O75093 1534 aa24.7■■□□□ 1.54
SREK1-216ENST00000612404 LTKP29376 864 aa24.68■■□□□ 1.54
SREK1-216ENST00000612404 BCANQ96GW7 911 aa24.68■■□□□ 1.54
SREK1-216ENST00000612404 ARHGAP23Q9P227 1491 aa24.68■■□□□ 1.54
SREK1-216ENST00000612404 TMEM132EQ6IEE7 984 aa24.66■■□□□ 1.54
SREK1-216ENST00000612404 SETBP1Q9Y6X0 1596 aa24.65■■□□□ 1.54
SREK1-216ENST00000612404 SCAF11Q99590 1463 aaKnown RBP24.64■■□□□ 1.53
SREK1-216ENST00000612404 ALKQ9UM73 1620 aa24.64■■□□□ 1.53
SREK1-216ENST00000612404 ST20-MTHFSA0A0A6YYL1 179 aa24.63■■□□□ 1.53
SREK1-216ENST00000612404 ADGRB1O14514 1584 aa24.62■■□□□ 1.53
SREK1-216ENST00000612404 IQGAP1P46940 1657 aa24.62■■□□□ 1.53
SREK1-216ENST00000612404 PLEKHG1Q9ULL1 1385 aa24.61■■□□□ 1.53
SREK1-216ENST00000612404 NRXN3Q9Y4C0 1643 aa24.6■■□□□ 1.53
SREK1-216ENST00000612404 ANKLE2Q86XL3 938 aa24.59■■□□□ 1.53
SREK1-216ENST00000612404 EIF3AQ14152 1382 aaKnown RBP24.58■■□□□ 1.53
SREK1-216ENST00000612404 TRAK1Q9UPV9 953 aa24.58■■□□□ 1.52
SREK1-216ENST00000612404 ASXL1Q8IXJ9 1541 aa24.57■■□□□ 1.52
SREK1-216ENST00000612404 STK26Q9P289 416 aa24.56■■□□□ 1.52
SREK1-216ENST00000612404 SETD1AO15047 1707 aaKnown RBP24.55■■□□□ 1.52
SREK1-216ENST00000612404 SLC26A8Q96RN1 970 aa24.53■■□□□ 1.52
SREK1-216ENST00000612404 ADAMTS13Q76LX8 1427 aa24.53■■□□□ 1.52
SREK1-216ENST00000612404 YTHDC2Q9H6S0 1430 aaKnown RBP24.52■■□□□ 1.52
SREK1-216ENST00000612404 METP08581 1390 aa24.52■■□□□ 1.52
SREK1-216ENST00000612404 C11orf95C9JLR9 678 aaPredicted RBP24.51■■□□□ 1.51
SREK1-216ENST00000612404 TESK2Q96S53 571 aa24.49■■□□□ 1.51
SREK1-216ENST00000612404 WASHC2AQ641Q2 1341 aa24.49■■□□□ 1.51
SREK1-216ENST00000612404 CENPJQ9HC77 1338 aaPredicted RBP24.47■■□□□ 1.51
SREK1-216ENST00000612404 NCKAP5LQ9HCH0 1330 aa24.47■■□□□ 1.51
SREK1-216ENST00000612404 HSPA2P54652 639 aa24.47■■□□□ 1.51
SREK1-216ENST00000612404 POLR1AO95602 1720 aaPredicted RBP24.47■■□□□ 1.51
SREK1-216ENST00000612404 MED14O60244 1454 aa24.47■■□□□ 1.51
SREK1-216ENST00000612404 LRPPRCP42704 1394 aaKnown RBP24.46■■□□□ 1.51
SREK1-216ENST00000612404 ARHGEF28Q8N1W1 1705 aaKnown RBP24.46■■□□□ 1.51
SREK1-216ENST00000612404 POLR3GLQ9BT43 218 aa24.46■■□□□ 1.51
SREK1-216ENST00000612404 TBX22Q9Y458 520 aa24.46■■□□□ 1.51
SREK1-216ENST00000612404 CCDC7Q96M83 1385 aa24.46■■□□□ 1.51
SREK1-216ENST00000612404 KIF7Q2M1P5 1343 aa24.46■■□□□ 1.51
SREK1-216ENST00000612404 LMTK3Q96Q04 1460 aa24.45■■□□□ 1.51
SREK1-216ENST00000612404 DIP2AQ14689 1571 aa24.45■■□□□ 1.5
SREK1-216ENST00000612404 DIEXFQ68CQ4 756 aaKnown RBP24.45■■□□□ 1.5
SREK1-216ENST00000612404 DDX10Q13206 875 aaKnown RBP24.44■■□□□ 1.5
SREK1-216ENST00000612404 NPHP4O75161 1426 aaPredicted RBP24.44■■□□□ 1.5
SREK1-216ENST00000612404 TMF1P82094 1093 aa24.43■■□□□ 1.5
SREK1-216ENST00000612404 SAFB2Q14151 953 aaKnown RBP eCLIP24.43■■□□□ 1.5
SREK1-216ENST00000612404 PRAM1Q96QH2 718 aa24.42■■□□□ 1.5
SREK1-216ENST00000612404 POGKQ9P215 609 aa24.42■■□□□ 1.5
SREK1-216ENST00000612404 ABCC11Q96J66 1382 aa24.42■■□□□ 1.5
SREK1-216ENST00000612404 QRICH2Q9H0J4 1663 aa24.42■■□□□ 1.5
SREK1-216ENST00000612404 DISP3Q9P2K9 1392 aa24.41■■□□□ 1.5
SREK1-216ENST00000612404 DLC1Q96QB1 1528 aa24.38■■□□□ 1.49
SREK1-216ENST00000612404 SLC24A1O60721 1099 aa24.38■■□□□ 1.49
SREK1-216ENST00000612404 SBNO2Q9Y2G9 1366 aa24.37■■□□□ 1.49
SREK1-216ENST00000612404 PTPRUQ92729 1446 aa24.37■■□□□ 1.49
SREK1-216ENST00000612404 WAPLQ7Z5K2 1190 aa24.37■■□□□ 1.49
SREK1-216ENST00000612404 AMOTL2Q9Y2J4 779 aa24.37■■□□□ 1.49
SREK1-216ENST00000612404 KNDC1Q76NI1 1749 aa24.36■■□□□ 1.49
SREK1-216ENST00000612404 TECPR2O15040 1411 aa24.36■■□□□ 1.49
SREK1-216ENST00000612404 PIK3R4Q99570 1358 aa24.34■■□□□ 1.49
SREK1-216ENST00000612404 CPS1P31327 1500 aa24.34■■□□□ 1.49
SREK1-216ENST00000612404 CDCA8Q53HL2 280 aa24.34■■□□□ 1.49
SREK1-216ENST00000612404 PLEKHH1Q9ULM0 1364 aa24.34■■□□□ 1.49
SREK1-216ENST00000612404 MINK1Q8N4C8 1332 aaPredicted RBP24.33■■□□□ 1.49
SREK1-216ENST00000612404 ROBO2Q9HCK4 1378 aa24.32■■□□□ 1.48
SREK1-216ENST00000612404 FAM135BQ49AJ0 1406 aa24.32■■□□□ 1.48
SREK1-216ENST00000612404 SIRT1Q96EB6 747 aa24.32■■□□□ 1.48
SREK1-216ENST00000612404 EVC2Q86UK5 1308 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms