RNA–Protein interactions for RNA: ENST00000611457.4

CBWD1-219, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 3,324 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-219ENST00000611457 LRRC7Q96NW7 1537 aa11.19□□□□□ -0.62
CBWD1-219ENST00000611457 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.17□□□□□ -0.62
CBWD1-219ENST00000611457 MST1RQ04912 1400 aa11.17□□□□□ -0.62
CBWD1-219ENST00000611457 LOC105371045A0A1W2PR82 267 aa11.16□□□□□ -0.62
CBWD1-219ENST00000611457 ITSN1Q15811 1721 aa11.16□□□□□ -0.62
CBWD1-219ENST00000611457 ADAMTS13Q76LX8 1427 aa11.16□□□□□ -0.62
CBWD1-219ENST00000611457 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.16□□□□□ -0.62
CBWD1-219ENST00000611457 RPGRIP1LQ68CZ1 1315 aa11.15□□□□□ -0.62
CBWD1-219ENST00000611457 STAC3Q96MF2 364 aa11.15□□□□□ -0.62
CBWD1-219ENST00000611457 ARHGEF28Q8N1W1 1705 aaKnown RBP11.14□□□□□ -0.63
CBWD1-219ENST00000611457 ASXL1Q8IXJ9 1541 aa11.14□□□□□ -0.63
CBWD1-219ENST00000611457 TTBK1Q5TCY1 1321 aaPredicted RBP11.13□□□□□ -0.63
CBWD1-219ENST00000611457 ADGRB1O14514 1584 aa11.13□□□□□ -0.63
CBWD1-219ENST00000611457 ABCA3Q99758 1704 aa11.12□□□□□ -0.63
CBWD1-219ENST00000611457 COL16A1Q07092 1604 aaPredicted RBP11.12□□□□□ -0.63
CBWD1-219ENST00000611457 MED1Q15648 1581 aaPredicted RBP11.12□□□□□ -0.63
CBWD1-219ENST00000611457 TRPM1Q7Z4N2 1603 aa11.11□□□□□ -0.63
CBWD1-219ENST00000611457 PIK3C2GO75747 1445 aa11.1□□□□□ -0.63
CBWD1-219ENST00000611457 SETD5Q9C0A6 1442 aa11.1□□□□□ -0.63
CBWD1-219ENST00000611457 SIRT1Q96EB6 747 aa11.09□□□□□ -0.63
CBWD1-219ENST00000611457 ARID3CA6NKF2 412 aa11.09□□□□□ -0.63
CBWD1-219ENST00000611457 APLP2Q06481 763 aa11.09□□□□□ -0.63
CBWD1-219ENST00000611457 TRPM3Q9HCF6 1732 aaPredicted RBP11.08□□□□□ -0.63
CBWD1-219ENST00000611457 RIMS2Q9UQ26 1411 aa11.08□□□□□ -0.64
CBWD1-219ENST00000611457 FAM135BQ49AJ0 1406 aa11.08□□□□□ -0.64
CBWD1-219ENST00000611457 THEMISQ8N1K5 641 aaPredicted RBP11.08□□□□□ -0.64
CBWD1-219ENST00000611457 FBXO41Q8TF61 875 aa11.06□□□□□ -0.64
CBWD1-219ENST00000611457 KIF3BO15066 747 aa11.06□□□□□ -0.64
CBWD1-219ENST00000611457 ABCC6O95255 1503 aa11.06□□□□□ -0.64
CBWD1-219ENST00000611457 WASHC2CQ9Y4E1 1318 aa11.05□□□□□ -0.64
CBWD1-219ENST00000611457 ROBO1Q9Y6N7 1651 aa11.05□□□□□ -0.64
CBWD1-219ENST00000611457 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.05□□□□□ -0.64
CBWD1-219ENST00000611457 ANKRD30BQ9BXX2 1392 aa11.04□□□□□ -0.64
CBWD1-219ENST00000611457 USP32Q8NFA0 1604 aa11.04□□□□□ -0.64
CBWD1-219ENST00000611457 PHRF1Q9P1Y6 1649 aaKnown RBP11.04□□□□□ -0.64
CBWD1-219ENST00000611457 ALS2Q96Q42 1657 aa11.04□□□□□ -0.64
CBWD1-219ENST00000611457 AKAP12Q02952 1782 aa11.03□□□□□ -0.64
CBWD1-219ENST00000611457 NWD2Q9ULI1 1742 aa11.03□□□□□ -0.64
CBWD1-219ENST00000611457 CFAP65Q6ZU64 1925 aaKnown RBP11.02□□□□□ -0.64
CBWD1-219ENST00000611457 ARID4BQ4LE39 1312 aaPredicted RBP11.02□□□□□ -0.65
CBWD1-219ENST00000611457 PHLPP1O60346 1717 aa11.02□□□□□ -0.65
CBWD1-219ENST00000611457 NUP155O75694 1391 aa11.02□□□□□ -0.65
CBWD1-219ENST00000611457 NRKQ7Z2Y5 1582 aa11.02□□□□□ -0.65
CBWD1-219ENST00000611457 TBX22Q9Y458 520 aa11.02□□□□□ -0.65
CBWD1-219ENST00000611457 ZNF777Q9ULD5 760 aaPredicted RBP11□□□□□ -0.65
CBWD1-219ENST00000611457 WNK3Q9BYP7 1800 aa11□□□□□ -0.65
CBWD1-219ENST00000611457 ATP1B4Q9UN42 357 aaPredicted RBP10.99□□□□□ -0.65
CBWD1-219ENST00000611457 ADGRL3Q9HAR2 1447 aa10.98□□□□□ -0.65
CBWD1-219ENST00000611457 PTPRUQ92729 1446 aa10.98□□□□□ -0.65
CBWD1-219ENST00000611457 CERKQ8TCT0 537 aa10.98□□□□□ -0.65
CBWD1-219ENST00000611457 ANKLE2Q86XL3 938 aa10.97□□□□□ -0.65
CBWD1-219ENST00000611457 ANKARQ7Z5J8 1434 aa10.97□□□□□ -0.65
CBWD1-219ENST00000611457 HDGFP51858 240 aaKnown RBP10.97□□□□□ -0.65
CBWD1-219ENST00000611457 MON2Q7Z3U7 1717 aa10.97□□□□□ -0.65
CBWD1-219ENST00000611457 PLCH1Q4KWH8 1693 aa10.96□□□□□ -0.65
CBWD1-219ENST00000611457 QRICH2Q9H0J4 1663 aa10.96□□□□□ -0.65
CBWD1-219ENST00000611457 ESF1Q9H501 851 aaKnown RBP10.96□□□□□ -0.66
CBWD1-219ENST00000611457 RANGAP1P46060 587 aaPredicted RBP10.96□□□□□ -0.66
CBWD1-219ENST00000611457 NRAPQ86VF7 1730 aa10.95□□□□□ -0.66
CBWD1-219ENST00000611457 CDK12Q9NYV4 1490 aaPredicted RBP10.95□□□□□ -0.66
CBWD1-219ENST00000611457 KCNA6P17658 529 aa10.95□□□□□ -0.66
CBWD1-219ENST00000611457 BRD4O60885 1362 aaPredicted RBP10.94□□□□□ -0.66
CBWD1-219ENST00000611457 ABCC11Q96J66 1382 aa10.94□□□□□ -0.66
CBWD1-219ENST00000611457 RGPD3A6NKT7 1758 aaPredicted RBP10.94□□□□□ -0.66
CBWD1-219ENST00000611457 RGPD4Q7Z3J3 1758 aa10.94□□□□□ -0.66
CBWD1-219ENST00000611457 GPRASP1Q5JY77 1395 aa10.94□□□□□ -0.66
CBWD1-219ENST00000611457 LRPPRCP42704 1394 aaKnown RBP10.93□□□□□ -0.66
CBWD1-219ENST00000611457 ANKRD26Q9UPS8 1709 aa10.92□□□□□ -0.66
CBWD1-219ENST00000611457 RRP7BPQ9NSQ0 103 aa10.92□□□□□ -0.66
CBWD1-219ENST00000611457 IDI1Q13907 227 aa10.92□□□□□ -0.66
CBWD1-219ENST00000611457 TULP4Q9NRJ4 1543 aa10.91□□□□□ -0.66
CBWD1-219ENST00000611457 RAB3GAP2Q9H2M9 1393 aa10.91□□□□□ -0.66
CBWD1-219ENST00000611457 SBNO2Q9Y2G9 1366 aa10.91□□□□□ -0.66
CBWD1-219ENST00000611457 CEBPAP49715 358 aaPredicted RBP10.9□□□□□ -0.66
CBWD1-219ENST00000611457 FBXO31Q5XUX0 539 aaPredicted RBP10.9□□□□□ -0.66
CBWD1-219ENST00000611457 CCDC144AA2RUR9 1427 aa10.9□□□□□ -0.66
CBWD1-219ENST00000611457 GGT6Q6P531 493 aa10.9□□□□□ -0.66
CBWD1-219ENST00000611457 FAM208AQ9UK61 1670 aaKnown RBP10.9□□□□□ -0.67
CBWD1-219ENST00000611457 CLSPNQ9HAW4 1339 aa10.89□□□□□ -0.67
CBWD1-219ENST00000611457 PXDNQ92626 1479 aa10.89□□□□□ -0.67
CBWD1-219ENST00000611457 CAMTA1Q9Y6Y1 1673 aa10.88□□□□□ -0.67
CBWD1-219ENST00000611457 RALGAPBQ86X10 1494 aa10.88□□□□□ -0.67
CBWD1-219ENST00000611457 LTKP29376 864 aa10.87□□□□□ -0.67
CBWD1-219ENST00000611457 EIF3AQ14152 1382 aaKnown RBP10.87□□□□□ -0.67
CBWD1-219ENST00000611457 PELP1Q8IZL8 1130 aaKnown RBP10.86□□□□□ -0.67
CBWD1-219ENST00000611457 NCKAP5LQ9HCH0 1330 aa10.86□□□□□ -0.67
CBWD1-219ENST00000611457 ATP7BP35670 1465 aa10.86□□□□□ -0.67
CBWD1-219ENST00000611457 RGPD8O14715 1765 aaPredicted RBP10.85□□□□□ -0.67
CBWD1-219ENST00000611457 LMO7Q8WWI1 1683 aa10.85□□□□□ -0.67
CBWD1-219ENST00000611457 EID1Q9Y6B2 187 aa10.85□□□□□ -0.67
CBWD1-219ENST00000611457 DHX57Q6P158 1386 aaKnown RBP10.84□□□□□ -0.67
CBWD1-219ENST00000611457 COL14A1Q05707 1796 aaKnown RBP10.84□□□□□ -0.67
CBWD1-219ENST00000611457 SLIT3O75094 1523 aa10.83□□□□□ -0.68
CBWD1-219ENST00000611457 YTHDC2Q9H6S0 1430 aaKnown RBP10.82□□□□□ -0.68
CBWD1-219ENST00000611457 MYOM1P52179 1685 aa10.82□□□□□ -0.68
CBWD1-219ENST00000611457 COL18A1P39060 1754 aa10.81□□□□□ -0.68
CBWD1-219ENST00000611457 PUS7Q96PZ0 661 aaKnown RBP10.81□□□□□ -0.68
CBWD1-219ENST00000611457 THSD7AQ9UPZ6 1657 aa10.81□□□□□ -0.68
CBWD1-219ENST00000611457 MPHOSPH9Q99550 1183 aa10.81□□□□□ -0.68
CBWD1-219ENST00000611457 COL24A1Q17RW2 1714 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms