RNA–Protein interactions for RNA: ENST00000611138.1

FAM228B-206, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 2

Gene FAM228B, Length 362 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-206ENST00000611138 POLR1AO95602 1720 aaPredicted RBP12.67□□□□□ -0.38
FAM228B-206ENST00000611138 CCDC144AA2RUR9 1427 aa12.65□□□□□ -0.38
FAM228B-206ENST00000611138 IDI1Q13907 227 aa12.64□□□□□ -0.39
FAM228B-206ENST00000611138 ANKRD30BQ9BXX2 1392 aa12.64□□□□□ -0.39
FAM228B-206ENST00000611138 IFT172Q9UG01 1749 aa12.63□□□□□ -0.39
FAM228B-206ENST00000611138 CHGAP10645 457 aaKnown RBP12.63□□□□□ -0.39
FAM228B-206ENST00000611138 SLC52A1Q9NWF4 448 aa12.63□□□□□ -0.39
FAM228B-206ENST00000611138 PPLO60437 1756 aa12.62□□□□□ -0.39
FAM228B-206ENST00000611138 STAG3Q9UJ98 1225 aa12.62□□□□□ -0.39
FAM228B-206ENST00000611138 STRCQ7RTU9 1775 aa12.61□□□□□ -0.39
FAM228B-206ENST00000611138 HSPA2P54652 639 aa12.6□□□□□ -0.39
FAM228B-206ENST00000611138 SLIT1O75093 1534 aa12.58□□□□□ -0.4
FAM228B-206ENST00000611138 NEXMIFQ5QGS0 1516 aa12.58□□□□□ -0.4
FAM228B-206ENST00000611138 CCER1Q8TC90 406 aaPredicted RBP12.58□□□□□ -0.4
FAM228B-206ENST00000611138 NEURL4Q96JN8 1562 aa12.58□□□□□ -0.4
FAM228B-206ENST00000611138 SPATA31E1Q6ZUB1 1445 aa12.57□□□□□ -0.4
FAM228B-206ENST00000611138 ZNF326Q5BKZ1 582 aaKnown RBP12.57□□□□□ -0.4
FAM228B-206ENST00000611138 THEMISQ8N1K5 641 aaPredicted RBP12.57□□□□□ -0.4
FAM228B-206ENST00000611138 ARHGAP23Q9P227 1491 aa12.57□□□□□ -0.4
FAM228B-206ENST00000611138 RIMS2Q9UQ26 1411 aa12.56□□□□□ -0.4
FAM228B-206ENST00000611138 CHRDL2Q6WN34 429 aa12.56□□□□□ -0.4
FAM228B-206ENST00000611138 SIN3AQ96ST3 1273 aa12.56□□□□□ -0.4
FAM228B-206ENST00000611138 IQGAP1P46940 1657 aa12.56□□□□□ -0.4
FAM228B-206ENST00000611138 TMEM2Q9UHN6 1383 aa12.56□□□□□ -0.4
FAM228B-206ENST00000611138 NEUROD1Q13562 356 aa12.55□□□□□ -0.4
FAM228B-206ENST00000611138 ZFYVE9O95405 1425 aa12.54□□□□□ -0.4
FAM228B-206ENST00000611138 SCAF11Q99590 1463 aaKnown RBP12.54□□□□□ -0.4
FAM228B-206ENST00000611138 RGL3Q3MIN7 710 aa12.54□□□□□ -0.4
FAM228B-206ENST00000611138 NUTM2DQ5VT03 806 aaPredicted RBP12.53□□□□□ -0.4
FAM228B-206ENST00000611138 NCKAP5LQ9HCH0 1330 aa12.52□□□□□ -0.41
FAM228B-206ENST00000611138 NRXN3Q9Y4C0 1643 aa12.51□□□□□ -0.41
FAM228B-206ENST00000611138 PPP1R15AO75807 674 aaPredicted RBP12.51□□□□□ -0.41
FAM228B-206ENST00000611138 U3KPZ7 1027 aaPredicted RBP12.51□□□□□ -0.41
FAM228B-206ENST00000611138 LTKP29376 864 aa12.5□□□□□ -0.41
FAM228B-206ENST00000611138 TXNDC2Q86VQ3 553 aa12.5□□□□□ -0.41
FAM228B-206ENST00000611138 ANKLE2Q86XL3 938 aa12.5□□□□□ -0.41
FAM228B-206ENST00000611138 EID1Q9Y6B2 187 aa12.5□□□□□ -0.41
FAM228B-206ENST00000611138 SETD1AO15047 1707 aaKnown RBP12.5□□□□□ -0.41
FAM228B-206ENST00000611138 MYOM2P54296 1465 aa12.49□□□□□ -0.41
FAM228B-206ENST00000611138 NPHP4O75161 1426 aaPredicted RBP12.49□□□□□ -0.41
FAM228B-206ENST00000611138 CLSPNQ9HAW4 1339 aa12.49□□□□□ -0.41
FAM228B-206ENST00000611138 MED14O60244 1454 aa12.48□□□□□ -0.41
FAM228B-206ENST00000611138 TONSLQ96HA7 1378 aa12.48□□□□□ -0.41
FAM228B-206ENST00000611138 RPGRIP1LQ68CZ1 1315 aa12.48□□□□□ -0.41
FAM228B-206ENST00000611138 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.48□□□□□ -0.41
FAM228B-206ENST00000611138 LAMC1P11047 1609 aa12.48□□□□□ -0.41
FAM228B-206ENST00000611138 SETBP1Q9Y6X0 1596 aa12.47□□□□□ -0.41
FAM228B-206ENST00000611138 HDGFP51858 240 aaKnown RBP12.47□□□□□ -0.41
FAM228B-206ENST00000611138 DCAF11Q8TEB1 546 aa12.47□□□□□ -0.41
FAM228B-206ENST00000611138 BCANQ96GW7 911 aa12.47□□□□□ -0.41
FAM228B-206ENST00000611138 PLEKHG1Q9ULL1 1385 aa12.46□□□□□ -0.41
FAM228B-206ENST00000611138 KDM2AQ9Y2K7 1162 aa12.46□□□□□ -0.41
FAM228B-206ENST00000611138 DIP2AQ14689 1571 aa12.46□□□□□ -0.42
FAM228B-206ENST00000611138 ADGRF5Q8IZF2 1346 aa12.45□□□□□ -0.42
FAM228B-206ENST00000611138 L3MBTL2Q969R5 705 aa12.45□□□□□ -0.42
FAM228B-206ENST00000611138 NRXN1Q9ULB1 1477 aa12.45□□□□□ -0.42
FAM228B-206ENST00000611138 ALKQ9UM73 1620 aa12.44□□□□□ -0.42
FAM228B-206ENST00000611138 CHD2O14647 1828 aaKnown RBP12.44□□□□□ -0.42
FAM228B-206ENST00000611138 STRCP1A6NGW2 1772 aa12.44□□□□□ -0.42
FAM228B-206ENST00000611138 VGFO15240 615 aaPredicted RBP12.44□□□□□ -0.42
FAM228B-206ENST00000611138 KIAA1210Q9ULL0 1709 aa12.44□□□□□ -0.42
FAM228B-206ENST00000611138 PIK3C2GO75747 1445 aa12.44□□□□□ -0.42
FAM228B-206ENST00000611138 TRPM1Q7Z4N2 1603 aa12.44□□□□□ -0.42
FAM228B-206ENST00000611138 ADAMTS13Q76LX8 1427 aa12.43□□□□□ -0.42
FAM228B-206ENST00000611138 SLC26A8Q96RN1 970 aa12.42□□□□□ -0.42
FAM228B-206ENST00000611138 ASXL1Q8IXJ9 1541 aa12.42□□□□□ -0.42
FAM228B-206ENST00000611138 PRAG1Q86YV5 1406 aa12.41□□□□□ -0.42
FAM228B-206ENST00000611138 KNDC1Q76NI1 1749 aa12.4□□□□□ -0.43
FAM228B-206ENST00000611138 XRN1Q8IZH2 1706 aaKnown RBP12.4□□□□□ -0.43
FAM228B-206ENST00000611138 NWD1Q149M9 1564 aa12.39□□□□□ -0.43
FAM228B-206ENST00000611138 RBM42Q9BTD8 480 aaKnown RBP12.39□□□□□ -0.43
FAM228B-206ENST00000611138 ABCB7O75027 752 aa12.37□□□□□ -0.43
FAM228B-206ENST00000611138 CFAP70Q5T0N1 1121 aa12.37□□□□□ -0.43
FAM228B-206ENST00000611138 XIRP1Q702N8 1843 aaKnown RBP12.37□□□□□ -0.43
FAM228B-206ENST00000611138 ADGRB1O14514 1584 aa12.36□□□□□ -0.43
FAM228B-206ENST00000611138 METP08581 1390 aa12.36□□□□□ -0.43
FAM228B-206ENST00000611138 STAC3Q96MF2 364 aa12.36□□□□□ -0.43
FAM228B-206ENST00000611138 ARHGEF28Q8N1W1 1705 aaKnown RBP12.36□□□□□ -0.43
FAM228B-206ENST00000611138 ZNF335Q9H4Z2 1342 aaPredicted RBP12.36□□□□□ -0.43
FAM228B-206ENST00000611138 TBX22Q9Y458 520 aa12.35□□□□□ -0.43
FAM228B-206ENST00000611138 PTPRUQ92729 1446 aa12.35□□□□□ -0.43
FAM228B-206ENST00000611138 RALGAPBQ86X10 1494 aa12.34□□□□□ -0.43
FAM228B-206ENST00000611138 NBPF8Q3BBV2 869 aa12.34□□□□□ -0.43
FAM228B-206ENST00000611138 TMEM132EQ6IEE7 984 aa12.34□□□□□ -0.43
FAM228B-206ENST00000611138 C14orf93Q9H972 538 aaKnown RBP12.34□□□□□ -0.43
FAM228B-206ENST00000611138 TIMELESSQ9UNS1 1208 aa12.34□□□□□ -0.43
FAM228B-206ENST00000611138 LTBP4Q8N2S1 1624 aa12.33□□□□□ -0.43
FAM228B-206ENST00000611138 PIK3R4Q99570 1358 aa12.33□□□□□ -0.44
FAM228B-206ENST00000611138 CPS1P31327 1500 aa12.33□□□□□ -0.44
FAM228B-206ENST00000611138 NKTRP30414 1462 aaKnown RBP12.33□□□□□ -0.44
FAM228B-206ENST00000611138 NALCNQ8IZF0 1738 aa12.32□□□□□ -0.44
FAM228B-206ENST00000611138 YTHDC2Q9H6S0 1430 aaKnown RBP12.32□□□□□ -0.44
FAM228B-206ENST00000611138 ROCK2O75116 1388 aaKnown RBP12.31□□□□□ -0.44
FAM228B-206ENST00000611138 NBPF1Q3BBV0 1214 aa12.31□□□□□ -0.44
FAM228B-206ENST00000611138 STK26Q9P289 416 aa12.31□□□□□ -0.44
FAM228B-206ENST00000611138 QRICH2Q9H0J4 1663 aa12.31□□□□□ -0.44
FAM228B-206ENST00000611138 LRPPRCP42704 1394 aaKnown RBP12.3□□□□□ -0.44
FAM228B-206ENST00000611138 KCNA6P17658 529 aa12.3□□□□□ -0.44
FAM228B-206ENST00000611138 AMOTL2Q9Y2J4 779 aa12.3□□□□□ -0.44
FAM228B-206ENST00000611138 LRRC7Q96NW7 1537 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms