RNA–Protein interactions for RNA: ENST00000610538.4

TP53-219, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-219ENST00000610538 SLC52A1Q9NWF4 448 aa17.07■□□□□ 0.32
TP53-219ENST00000610538 ARHGAP31Q2M1Z3 1444 aa17.07■□□□□ 0.32
TP53-219ENST00000610538 TMEM132EQ6IEE7 984 aa17.06■□□□□ 0.32
TP53-219ENST00000610538 GPRASP1Q5JY77 1395 aa17.06■□□□□ 0.32
TP53-219ENST00000610538 MROH2AA6NES4 1674 aa17.06■□□□□ 0.32
TP53-219ENST00000610538 STAC3Q96MF2 364 aa17.06■□□□□ 0.32
TP53-219ENST00000610538 ARHGEF40Q8TER5 1519 aa17.06■□□□□ 0.32
TP53-219ENST00000610538 SYNMO15061 1565 aa17.06■□□□□ 0.32
TP53-219ENST00000610538 TESK2Q96S53 571 aa17.05■□□□□ 0.32
TP53-219ENST00000610538 AGLP35573 1532 aa17.04■□□□□ 0.32
TP53-219ENST00000610538 MADDQ8WXG6 1647 aa17.04■□□□□ 0.32
TP53-219ENST00000610538 PPP6R1Q9UPN7 881 aa17.04■□□□□ 0.32
TP53-219ENST00000610538 CEBPAP49715 358 aaPredicted RBP17.03■□□□□ 0.32
TP53-219ENST00000610538 ZMYM3Q14202 1370 aa17.03■□□□□ 0.32
TP53-219ENST00000610538 CLTCQ00610 1675 aaKnown RBP17.02■□□□□ 0.32
TP53-219ENST00000610538 ADGRB3O60242 1522 aa17.02■□□□□ 0.31
TP53-219ENST00000610538 TRAK1Q9UPV9 953 aa17.01■□□□□ 0.31
TP53-219ENST00000610538 REREQ9P2R6 1566 aa17.01■□□□□ 0.31
TP53-219ENST00000610538 ZC3H13Q5T200 1668 aaKnown RBP17.01■□□□□ 0.31
TP53-219ENST00000610538 VGFO15240 615 aaPredicted RBP17■□□□□ 0.31
TP53-219ENST00000610538 DISP3Q9P2K9 1392 aa17■□□□□ 0.31
TP53-219ENST00000610538 CENPBP07199 599 aaPredicted RBP17■□□□□ 0.31
TP53-219ENST00000610538 ERVK-7P63135 1459 aa16.98■□□□□ 0.31
TP53-219ENST00000610538 PREX1Q8TCU6 1659 aa16.98■□□□□ 0.31
TP53-219ENST00000610538 RPGRIP1LQ68CZ1 1315 aa16.98■□□□□ 0.31
TP53-219ENST00000610538 TMF1P82094 1093 aa16.98■□□□□ 0.31
TP53-219ENST00000610538 CCDC184Q52MB2 194 aa16.97■□□□□ 0.31
TP53-219ENST00000610538 PRKRIP1Q9H875 184 aaPredicted RBP16.97■□□□□ 0.31
TP53-219ENST00000610538 C14orf93Q9H972 538 aaKnown RBP16.97■□□□□ 0.31
TP53-219ENST00000610538 MYOM2P54296 1465 aa16.97■□□□□ 0.31
TP53-219ENST00000610538 STK26Q9P289 416 aa16.96■□□□□ 0.31
TP53-219ENST00000610538 PIK3C2BO00750 1634 aa16.95■□□□□ 0.3
TP53-219ENST00000610538 NEURL4Q96JN8 1562 aa16.95■□□□□ 0.3
TP53-219ENST00000610538 SCAF11Q99590 1463 aaKnown RBP16.95■□□□□ 0.3
TP53-219ENST00000610538 CCER2I3L3R5 266 aa16.94■□□□□ 0.3
TP53-219ENST00000610538 SAFB2Q14151 953 aaKnown RBP eCLIP16.94■□□□□ 0.3
TP53-219ENST00000610538 PIK3C2GO75747 1445 aa16.94■□□□□ 0.3
TP53-219ENST00000610538 MYO5BQ9ULV0 1848 aa16.93■□□□□ 0.3
TP53-219ENST00000610538 IFT172Q9UG01 1749 aa16.92■□□□□ 0.3
TP53-219ENST00000610538 PPLO60437 1756 aa16.92■□□□□ 0.3
TP53-219ENST00000610538 PRKCSHP14314 528 aaPredicted RBP16.92■□□□□ 0.3
TP53-219ENST00000610538 NRXN1Q9ULB1 1477 aa16.92■□□□□ 0.3
TP53-219ENST00000610538 POLR1AO95602 1720 aaPredicted RBP16.92■□□□□ 0.3
TP53-219ENST00000610538 PANK3Q9H999 370 aa16.91■□□□□ 0.3
TP53-219ENST00000610538 NEXMIFQ5QGS0 1516 aa16.91■□□□□ 0.3
TP53-219ENST00000610538 TMEM131LA2VDJ0 1609 aa16.9■□□□□ 0.3
TP53-219ENST00000610538 LAMC1P11047 1609 aa16.9■□□□□ 0.3
TP53-219ENST00000610538 EIF3AQ14152 1382 aaKnown RBP16.89■□□□□ 0.29
TP53-219ENST00000610538 BCANQ96GW7 911 aa16.88■□□□□ 0.29
TP53-219ENST00000610538 MRS2Q9HD23 443 aa16.87■□□□□ 0.29
TP53-219ENST00000610538 TNRQ92752 1358 aa16.87■□□□□ 0.29
TP53-219ENST00000610538 CENPJQ9HC77 1338 aaPredicted RBP16.87■□□□□ 0.29
TP53-219ENST00000610538 SPATA31D1Q6ZQQ2 1576 aa16.87■□□□□ 0.29
TP53-219ENST00000610538 IQGAP1P46940 1657 aa16.87■□□□□ 0.29
TP53-219ENST00000610538 CC2D1BQ5T0F9 858 aaKnown RBP16.86■□□□□ 0.29
TP53-219ENST00000610538 A2ML1A8K2U0 1454 aa16.86■□□□□ 0.29
TP53-219ENST00000610538 FAM9BQ8IZU0 186 aa16.86■□□□□ 0.29
TP53-219ENST00000610538 PER1O15534 1290 aaPredicted RBP16.84■□□□□ 0.29
TP53-219ENST00000610538 KIAA1210Q9ULL0 1709 aa16.84■□□□□ 0.29
TP53-219ENST00000610538 RIMS2Q9UQ26 1411 aa16.84■□□□□ 0.29
TP53-219ENST00000610538 ADGRB1O14514 1584 aa16.83■□□□□ 0.28
TP53-219ENST00000610538 CDCA8Q53HL2 280 aa16.83■□□□□ 0.28
TP53-219ENST00000610538 GTF3C3Q9Y5Q9 886 aa16.83■□□□□ 0.28
TP53-219ENST00000610538 TMC1Q8TDI8 760 aa16.82■□□□□ 0.28
TP53-219ENST00000610538 SENP3-EIF4A1A0A087X0R7 540 aa16.81■□□□□ 0.28
TP53-219ENST00000610538 ZFYVE9O95405 1425 aa16.81■□□□□ 0.28
TP53-219ENST00000610538 PRAM1Q96QH2 718 aa16.81■□□□□ 0.28
TP53-219ENST00000610538 POGKQ9P215 609 aa16.8■□□□□ 0.28
TP53-219ENST00000610538 LTKP29376 864 aa16.79■□□□□ 0.28
TP53-219ENST00000610538 MINK1Q8N4C8 1332 aaPredicted RBP16.79■□□□□ 0.28
TP53-219ENST00000610538 WAPLQ7Z5K2 1190 aa16.79■□□□□ 0.28
TP53-219ENST00000610538 SETBP1Q9Y6X0 1596 aa16.78■□□□□ 0.28
TP53-219ENST00000610538 HNRNPUQ00839 825 aaKnown RBP eCLIP16.78■□□□□ 0.28
TP53-219ENST00000610538 SLC12A5Q9H2X9 1139 aa16.78■□□□□ 0.28
TP53-219ENST00000610538 KNSTRNQ9Y448 316 aa16.78■□□□□ 0.28
TP53-219ENST00000610538 CABP2Q9NPB3 220 aa16.78■□□□□ 0.28
TP53-219ENST00000610538 TXNDC2Q86VQ3 553 aa16.77■□□□□ 0.28
TP53-219ENST00000610538 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.77■□□□□ 0.27
TP53-219ENST00000610538 HDGFP51858 240 aaKnown RBP16.76■□□□□ 0.27
TP53-219ENST00000610538 SLC26A8Q96RN1 970 aa16.76■□□□□ 0.27
TP53-219ENST00000610538 TMEM2Q9UHN6 1383 aa16.75■□□□□ 0.27
TP53-219ENST00000610538 ALKQ9UM73 1620 aa16.75■□□□□ 0.27
TP53-219ENST00000610538 YTHDC2Q9H6S0 1430 aaKnown RBP16.75■□□□□ 0.27
TP53-219ENST00000610538 ASXL1Q8IXJ9 1541 aa16.75■□□□□ 0.27
TP53-219ENST00000610538 KTN1Q86UP2 1357 aaKnown RBP16.74■□□□□ 0.27
TP53-219ENST00000610538 METP08581 1390 aa16.74■□□□□ 0.27
TP53-219ENST00000610538 SRPK2P78362 688 aaKnown RBP16.74■□□□□ 0.27
TP53-219ENST00000610538 CARD14Q9BXL6 1004 aa16.74■□□□□ 0.27
TP53-219ENST00000610538 FER1L4A9Z1Z3 1794 aa16.73■□□□□ 0.27
TP53-219ENST00000610538 RALBP1Q15311 655 aa16.73■□□□□ 0.27
TP53-219ENST00000610538 C3P01024 1663 aa16.73■□□□□ 0.27
TP53-219ENST00000610538 EVC2Q86UK5 1308 aa16.72■□□□□ 0.27
TP53-219ENST00000610538 MYBBP1AQ9BQG0 1328 aaKnown RBP16.71■□□□□ 0.27
TP53-219ENST00000610538 PTPRMP28827 1452 aa16.71■□□□□ 0.27
TP53-219ENST00000610538 SBNO2Q9Y2G9 1366 aa16.71■□□□□ 0.27
TP53-219ENST00000610538 EID1Q9Y6B2 187 aa16.71■□□□□ 0.26
TP53-219ENST00000610538 PLEKHH1Q9ULM0 1364 aa16.7■□□□□ 0.26
TP53-219ENST00000610538 QRICH2Q9H0J4 1663 aa16.7■□□□□ 0.26
TP53-219ENST00000610538 THEMISQ8N1K5 641 aaPredicted RBP16.69■□□□□ 0.26
TP53-219ENST00000610538 KDM5AP29375 1690 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms