RNA–Protein interactions for RNA: ENST00000610509.1

NPRL3-210, Transcript of NPR3 like, GATOR1 complex subunit, humanhuman

TSL 2

Gene NPRL3, Length 2,917 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPRL3-210ENST00000610509 TBC1D2Q9BYX2 928 aa17.09■□□□□ 0.33
NPRL3-210ENST00000610509 KNSTRNQ9Y448 316 aa17.09■□□□□ 0.33
NPRL3-210ENST00000610509 TRMT2AQ8IZ69 625 aaKnown RBP17.09■□□□□ 0.33
NPRL3-210ENST00000610509 VSIG10Q8N0Z9 540 aa17.08■□□□□ 0.33
NPRL3-210ENST00000610509 PNNQ9H307 717 aaKnown RBP17.08■□□□□ 0.33
NPRL3-210ENST00000610509 EIF4G3O43432 1585 aaKnown RBP17.08■□□□□ 0.32
NPRL3-210ENST00000610509 AMER1Q5JTC6 1135 aaPredicted RBP17.08■□□□□ 0.32
NPRL3-210ENST00000610509 PRDM15P57071 1507 aaPredicted RBP17.08■□□□□ 0.32
NPRL3-210ENST00000610509 CDC42BPAQ5VT25 1732 aa17.07■□□□□ 0.32
NPRL3-210ENST00000610509 NKTRP30414 1462 aaKnown RBP17.07■□□□□ 0.32
NPRL3-210ENST00000610509 VIRMAQ69YN4 1812 aaKnown RBP17.07■□□□□ 0.32
NPRL3-210ENST00000610509 GOLGA6L3A6NEY3 463 aa17.07■□□□□ 0.32
NPRL3-210ENST00000610509 CLUAP1Q96AJ1 413 aa17.07■□□□□ 0.32
NPRL3-210ENST00000610509 FAM135AQ9P2D6 1515 aa17.06■□□□□ 0.32
NPRL3-210ENST00000610509 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.06■□□□□ 0.32
NPRL3-210ENST00000610509 PLA2R1Q13018 1463 aa17.06■□□□□ 0.32
NPRL3-210ENST00000610509 MAPK8IP3Q9UPT6 1336 aa17.05■□□□□ 0.32
NPRL3-210ENST00000610509 WDR7Q9Y4E6 1490 aa17.05■□□□□ 0.32
NPRL3-210ENST00000610509 FSD2A1L4K1 749 aa17.05■□□□□ 0.32
NPRL3-210ENST00000610509 ZMYND15Q9H091 742 aa17.04■□□□□ 0.32
NPRL3-210ENST00000610509 CANXP27824 592 aaKnown RBP17.04■□□□□ 0.32
NPRL3-210ENST00000610509 TBC1D32Q96NH3 1257 aa17.04■□□□□ 0.32
NPRL3-210ENST00000610509 SHANK2Q9UPX8 1470 aa17.04■□□□□ 0.32
NPRL3-210ENST00000610509 CLCN1P35523 988 aa17.03■□□□□ 0.32
NPRL3-210ENST00000610509 MCM4P33991 863 aa17.03■□□□□ 0.32
NPRL3-210ENST00000610509 TNNQ9UQP3 1299 aa17.03■□□□□ 0.32
NPRL3-210ENST00000610509 CGNL1Q0VF96 1302 aa17.03■□□□□ 0.32
NPRL3-210ENST00000610509 GRIN2AQ12879 1464 aa17.02■□□□□ 0.32
NPRL3-210ENST00000610509 HSP90AA2PQ14568 343 aaPredicted RBP17.01■□□□□ 0.31
NPRL3-210ENST00000610509 GLIPR1L2Q4G1C9 344 aa17.01■□□□□ 0.31
NPRL3-210ENST00000610509 ADCY10Q96PN6 1610 aa17.01■□□□□ 0.31
NPRL3-210ENST00000610509 E9PSI1 815 aa17■□□□□ 0.31
NPRL3-210ENST00000610509 UPF2Q9HAU5 1272 aaKnown RBP17■□□□□ 0.31
NPRL3-210ENST00000610509 PCDHB15Q9Y5E8 787 aa17■□□□□ 0.31
NPRL3-210ENST00000610509 CENPJQ9HC77 1338 aaPredicted RBP17■□□□□ 0.31
NPRL3-210ENST00000610509 ABCC10Q5T3U5 1492 aa16.99■□□□□ 0.31
NPRL3-210ENST00000610509 HSP90AA1P07900 732 aaKnown RBP16.99■□□□□ 0.31
NPRL3-210ENST00000610509 PDE3AQ14432 1141 aa16.99■□□□□ 0.31
NPRL3-210ENST00000610509 CLASP1Q7Z460 1538 aa16.99■□□□□ 0.31
NPRL3-210ENST00000610509 ERBB4Q15303 1308 aa16.98■□□□□ 0.31
NPRL3-210ENST00000610509 PLEKHD1A6NEE1 506 aa16.98■□□□□ 0.31
NPRL3-210ENST00000610509 RLBP1P12271 317 aa16.98■□□□□ 0.31
NPRL3-210ENST00000610509 TRAK2O60296 914 aa16.97■□□□□ 0.31
NPRL3-210ENST00000610509 BCL2L13Q9BXK5 485 aa16.97■□□□□ 0.31
NPRL3-210ENST00000610509 PDZRN3Q9UPQ7 1066 aa16.97■□□□□ 0.31
NPRL3-210ENST00000610509 LAMC1P11047 1609 aa16.96■□□□□ 0.31
NPRL3-210ENST00000610509 PIK3C2GO75747 1445 aa16.95■□□□□ 0.3
NPRL3-210ENST00000610509 NEUROD2Q15784 382 aa16.95■□□□□ 0.3
NPRL3-210ENST00000610509 JPH4Q96JJ6 628 aa16.94■□□□□ 0.3
NPRL3-210ENST00000610509 RRP9O43818 475 aaKnown RBP16.93■□□□□ 0.3
NPRL3-210ENST00000610509 ASXL1Q8IXJ9 1541 aa16.93■□□□□ 0.3
NPRL3-210ENST00000610509 RRP7AQ9Y3A4 280 aaKnown RBP16.93■□□□□ 0.3
NPRL3-210ENST00000610509 MYO5CQ9NQX4 1742 aa16.93■□□□□ 0.3
NPRL3-210ENST00000610509 SYNJ2O15056 1496 aa16.93■□□□□ 0.3
NPRL3-210ENST00000610509 CCDC141Q6ZP82 1450 aa16.92■□□□□ 0.3
NPRL3-210ENST00000610509 MAGI1Q96QZ7 1491 aaPredicted RBP16.92■□□□□ 0.3
NPRL3-210ENST00000610509 MFAP1P55081 439 aaKnown RBP16.92■□□□□ 0.3
NPRL3-210ENST00000610509 WWC1Q8IX03 1113 aa16.92■□□□□ 0.3
NPRL3-210ENST00000610509 GRPEL1Q9HAV7 217 aa16.92■□□□□ 0.3
NPRL3-210ENST00000610509 ABCC2Q92887 1545 aa16.92■□□□□ 0.3
NPRL3-210ENST00000610509 MRE11P49959 708 aa16.92■□□□□ 0.3
NPRL3-210ENST00000610509 ESPNB1AK53 854 aa16.91■□□□□ 0.3
NPRL3-210ENST00000610509 MYH16Q9H6N6 1097 aa16.91■□□□□ 0.3
NPRL3-210ENST00000610509 CHMP5Q9NZZ3 219 aa16.91■□□□□ 0.3
NPRL3-210ENST00000610509 PMFBP1Q8TBY8 1022 aa16.9■□□□□ 0.3
NPRL3-210ENST00000610509 RARSP54136 660 aaKnown RBP16.9■□□□□ 0.3
NPRL3-210ENST00000610509 EIF2AK4Q9P2K8 1649 aaKnown RBP16.9■□□□□ 0.3
NPRL3-210ENST00000610509 RTEL1-TNFRSF6BF6WH68 1400 aa16.89■□□□□ 0.29
NPRL3-210ENST00000610509 C22orf23Q9BZE7 217 aa16.89■□□□□ 0.29
NPRL3-210ENST00000610509 NUP160Q12769 1436 aa16.88■□□□□ 0.29
NPRL3-210ENST00000610509 GAS2L3Q86XJ1 694 aa16.87■□□□□ 0.29
NPRL3-210ENST00000610509 ATP10BO94823 1461 aa16.87■□□□□ 0.29
NPRL3-210ENST00000610509 NINLQ9Y2I6 1382 aa16.87■□□□□ 0.29
NPRL3-210ENST00000610509 ZNF692Q9BU19 519 aaPredicted RBP16.86■□□□□ 0.29
NPRL3-210ENST00000610509 RNF17Q9BXT8 1623 aaKnown RBP16.86■□□□□ 0.29
NPRL3-210ENST00000610509 SYNMO15061 1565 aa16.86■□□□□ 0.29
NPRL3-210ENST00000610509 ARHGEF5Q12774 1597 aa16.85■□□□□ 0.29
NPRL3-210ENST00000610509 CARD14Q9BXL6 1004 aa16.84■□□□□ 0.29
NPRL3-210ENST00000610509 SAMD9LQ8IVG5 1584 aa16.84■□□□□ 0.29
NPRL3-210ENST00000610509 TNNT2P45379 298 aaPredicted RBP16.83■□□□□ 0.29
NPRL3-210ENST00000610509 CARMIL2Q6F5E8 1435 aa16.83■□□□□ 0.29
NPRL3-210ENST00000610509 CDCA8Q53HL2 280 aa16.83■□□□□ 0.28
NPRL3-210ENST00000610509 ABCA8O94911 1581 aa16.83■□□□□ 0.28
NPRL3-210ENST00000610509 RWDD1Q9H446 243 aaPredicted RBP16.83■□□□□ 0.28
NPRL3-210ENST00000610509 MYOM1P52179 1685 aa16.82■□□□□ 0.28
NPRL3-210ENST00000610509 PLXNC1O60486 1568 aa16.82■□□□□ 0.28
NPRL3-210ENST00000610509 TRIM44Q96DX7 344 aaPredicted RBP16.82■□□□□ 0.28
NPRL3-210ENST00000610509 DDX11L8A8MPP1 907 aa16.82■□□□□ 0.28
NPRL3-210ENST00000610509 NPC1L1Q9UHC9 1359 aa16.81■□□□□ 0.28
NPRL3-210ENST00000610509 HSCBQ8IWL3 235 aa16.81■□□□□ 0.28
NPRL3-210ENST00000610509 UNC13BO14795 1591 aa16.8■□□□□ 0.28
NPRL3-210ENST00000610509 SYCP2Q9BX26 1530 aa16.8■□□□□ 0.28
NPRL3-210ENST00000610509 TNPO1Q92973 898 aaKnown RBP16.8■□□□□ 0.28
NPRL3-210ENST00000610509 IQGAP1P46940 1657 aa16.8■□□□□ 0.28
NPRL3-210ENST00000610509 ZMYM3Q14202 1370 aa16.8■□□□□ 0.28
NPRL3-210ENST00000610509 TCP11L2Q8N4U5 519 aa16.8■□□□□ 0.28
NPRL3-210ENST00000610509 SCAF11Q99590 1463 aaKnown RBP16.79■□□□□ 0.28
NPRL3-210ENST00000610509 FOXD4L1Q9NU39 408 aa16.78■□□□□ 0.28
NPRL3-210ENST00000610509 MADDQ8WXG6 1647 aa16.78■□□□□ 0.28
NPRL3-210ENST00000610509 SLC24A1O60721 1099 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms