RNA–Protein interactions for RNA: ENST00000609203.1

CLCN3P1-202, Transcript of chloride voltage-gated channel 3 pseudogene 1, humanhuman

TSL 2 BASIC

Gene CLCN3P1, Length 1,944 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P1-202ENST00000609203 PRDM15P57071 1507 aaPredicted RBP11.35□□□□□ -0.59
CLCN3P1-202ENST00000609203 HSPA5P11021 654 aaKnown RBP11.34□□□□□ -0.59
CLCN3P1-202ENST00000609203 GGT6Q6P531 493 aa11.34□□□□□ -0.59
CLCN3P1-202ENST00000609203 CEP152O94986 1710 aa11.34□□□□□ -0.59
CLCN3P1-202ENST00000609203 MLECQ14165 292 aa11.33□□□□□ -0.6
CLCN3P1-202ENST00000609203 NBPF8Q3BBV2 869 aa11.33□□□□□ -0.6
CLCN3P1-202ENST00000609203 CCDC144AA2RUR9 1427 aa11.31□□□□□ -0.6
CLCN3P1-202ENST00000609203 ABCC3O15438 1527 aa11.31□□□□□ -0.6
CLCN3P1-202ENST00000609203 ZNF326Q5BKZ1 582 aaKnown RBP11.31□□□□□ -0.6
CLCN3P1-202ENST00000609203 BCL11BQ9C0K0 894 aaPredicted RBP11.31□□□□□ -0.6
CLCN3P1-202ENST00000609203 CCDC9Q9Y3X0 531 aaKnown RBP11.31□□□□□ -0.6
CLCN3P1-202ENST00000609203 E9PCH4 1651 aa11.3□□□□□ -0.6
CLCN3P1-202ENST00000609203 CLTCQ00610 1675 aaKnown RBP11.29□□□□□ -0.6
CLCN3P1-202ENST00000609203 CFAP65Q6ZU64 1925 aaKnown RBP11.29□□□□□ -0.6
CLCN3P1-202ENST00000609203 ARID4BQ4LE39 1312 aaPredicted RBP11.29□□□□□ -0.6
CLCN3P1-202ENST00000609203 ANP32CO43423 234 aa11.29□□□□□ -0.6
CLCN3P1-202ENST00000609203 SLC4A2P04920 1241 aa11.29□□□□□ -0.6
CLCN3P1-202ENST00000609203 SPHKAPQ2M3C7 1700 aa11.28□□□□□ -0.6
CLCN3P1-202ENST00000609203 TET3O43151 1660 aa11.28□□□□□ -0.6
CLCN3P1-202ENST00000609203 PLA2R1Q13018 1463 aa11.28□□□□□ -0.6
CLCN3P1-202ENST00000609203 RALGAPBQ86X10 1494 aa11.28□□□□□ -0.6
CLCN3P1-202ENST00000609203 UHRF1BP1Q6BDS2 1440 aa11.28□□□□□ -0.6
CLCN3P1-202ENST00000609203 MADDQ8WXG6 1647 aa11.28□□□□□ -0.6
CLCN3P1-202ENST00000609203 ADAMTSL3P82987 1691 aa11.27□□□□□ -0.6
CLCN3P1-202ENST00000609203 LMTK2Q8IWU2 1503 aa11.27□□□□□ -0.61
CLCN3P1-202ENST00000609203 CAMSAP1Q5T5Y3 1602 aa11.27□□□□□ -0.61
CLCN3P1-202ENST00000609203 FGD1P98174 961 aa11.27□□□□□ -0.61
CLCN3P1-202ENST00000609203 NPATQ14207 1427 aa11.27□□□□□ -0.61
CLCN3P1-202ENST00000609203 KANK1Q14678 1352 aa11.26□□□□□ -0.61
CLCN3P1-202ENST00000609203 EFCAB6Q5THR3 1501 aa11.26□□□□□ -0.61
CLCN3P1-202ENST00000609203 PUS7Q96PZ0 661 aaKnown RBP11.26□□□□□ -0.61
CLCN3P1-202ENST00000609203 WASHC2AQ641Q2 1341 aa11.26□□□□□ -0.61
CLCN3P1-202ENST00000609203 WASHC2CQ9Y4E1 1318 aa11.26□□□□□ -0.61
CLCN3P1-202ENST00000609203 FER1L4A9Z1Z3 1794 aa11.25□□□□□ -0.61
CLCN3P1-202ENST00000609203 UGGT1Q9NYU2 1555 aa11.25□□□□□ -0.61
CLCN3P1-202ENST00000609203 CEBPAP49715 358 aaPredicted RBP11.25□□□□□ -0.61
CLCN3P1-202ENST00000609203 FBXO31Q5XUX0 539 aaPredicted RBP11.25□□□□□ -0.61
CLCN3P1-202ENST00000609203 DCAF11Q8TEB1 546 aa11.25□□□□□ -0.61
CLCN3P1-202ENST00000609203 FOXD4L1Q9NU39 408 aa11.25□□□□□ -0.61
CLCN3P1-202ENST00000609203 TRPM1Q7Z4N2 1603 aa11.25□□□□□ -0.61
CLCN3P1-202ENST00000609203 USP47Q96K76 1375 aa11.25□□□□□ -0.61
CLCN3P1-202ENST00000609203 SPATA31E1Q6ZUB1 1445 aa11.24□□□□□ -0.61
CLCN3P1-202ENST00000609203 CCDC7Q96M83 1385 aa11.24□□□□□ -0.61
CLCN3P1-202ENST00000609203 ZC3H13Q5T200 1668 aaKnown RBP11.24□□□□□ -0.61
CLCN3P1-202ENST00000609203 CNTLNQ9NXG0 1405 aa11.24□□□□□ -0.61
CLCN3P1-202ENST00000609203 KDM4FA0A1W2PPD8 638 aa11.23□□□□□ -0.61
CLCN3P1-202ENST00000609203 TRPM2O94759 1503 aa11.23□□□□□ -0.61
CLCN3P1-202ENST00000609203 C3P01024 1663 aa11.23□□□□□ -0.61
CLCN3P1-202ENST00000609203 RIMS1Q86UR5 1692 aaKnown RBP11.23□□□□□ -0.61
CLCN3P1-202ENST00000609203 SYNMO15061 1565 aa11.22□□□□□ -0.61
CLCN3P1-202ENST00000609203 ZMYM3Q14202 1370 aa11.21□□□□□ -0.61
CLCN3P1-202ENST00000609203 CCER2I3L3R5 266 aa11.21□□□□□ -0.61
CLCN3P1-202ENST00000609203 CLTCL1P53675 1640 aa11.21□□□□□ -0.61
CLCN3P1-202ENST00000609203 KIF1BO60333 1816 aa11.21□□□□□ -0.62
CLCN3P1-202ENST00000609203 RGL3Q3MIN7 710 aa11.21□□□□□ -0.62
CLCN3P1-202ENST00000609203 CARD11Q9BXL7 1154 aa11.21□□□□□ -0.62
CLCN3P1-202ENST00000609203 PREX1Q8TCU6 1659 aa11.2□□□□□ -0.62
CLCN3P1-202ENST00000609203 ROCK2O75116 1388 aaKnown RBP11.2□□□□□ -0.62
CLCN3P1-202ENST00000609203 PTPRTO14522 1441 aa11.2□□□□□ -0.62
CLCN3P1-202ENST00000609203 ARHGAP31Q2M1Z3 1444 aa11.2□□□□□ -0.62
CLCN3P1-202ENST00000609203 PRAG1Q86YV5 1406 aa11.2□□□□□ -0.62
CLCN3P1-202ENST00000609203 LAMC1P11047 1609 aa11.2□□□□□ -0.62
CLCN3P1-202ENST00000609203 MROH2AA6NES4 1674 aa11.19□□□□□ -0.62
CLCN3P1-202ENST00000609203 KIF7Q2M1P5 1343 aa11.19□□□□□ -0.62
CLCN3P1-202ENST00000609203 NOS1P29475 1434 aa11.19□□□□□ -0.62
CLCN3P1-202ENST00000609203 C11orf95C9JLR9 678 aaPredicted RBP11.19□□□□□ -0.62
CLCN3P1-202ENST00000609203 BCCIPQ9P287 314 aaKnown RBP eCLIP11.18□□□□□ -0.62
CLCN3P1-202ENST00000609203 ERVK-7P63135 1459 aa11.18□□□□□ -0.62
CLCN3P1-202ENST00000609203 SPATA31D1Q6ZQQ2 1576 aa11.17□□□□□ -0.62
CLCN3P1-202ENST00000609203 PTPRMP28827 1452 aa11.16□□□□□ -0.62
CLCN3P1-202ENST00000609203 PIK3C2BO00750 1634 aa11.16□□□□□ -0.62
CLCN3P1-202ENST00000609203 POLR3GLQ9BT43 218 aa11.16□□□□□ -0.62
CLCN3P1-202ENST00000609203 MYO5BQ9ULV0 1848 aa11.15□□□□□ -0.62
CLCN3P1-202ENST00000609203 NBR1Q14596 966 aa11.14□□□□□ -0.63
CLCN3P1-202ENST00000609203 IDI1Q13907 227 aa11.13□□□□□ -0.63
CLCN3P1-202ENST00000609203 NEURL4Q96JN8 1562 aa11.13□□□□□ -0.63
CLCN3P1-202ENST00000609203 IFT172Q9UG01 1749 aa11.12□□□□□ -0.63
CLCN3P1-202ENST00000609203 GPRASP1Q5JY77 1395 aa11.12□□□□□ -0.63
CLCN3P1-202ENST00000609203 ST20-MTHFSA0A0A6YYL1 179 aa11.12□□□□□ -0.63
CLCN3P1-202ENST00000609203 CFAP44Q96MT7 982 aa11.11□□□□□ -0.63
CLCN3P1-202ENST00000609203 ESF1Q9H501 851 aaKnown RBP11.11□□□□□ -0.63
CLCN3P1-202ENST00000609203 KIAA1210Q9ULL0 1709 aa11.11□□□□□ -0.63
CLCN3P1-202ENST00000609203 IQGAP1P46940 1657 aa11.11□□□□□ -0.63
CLCN3P1-202ENST00000609203 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.11□□□□□ -0.63
CLCN3P1-202ENST00000609203 NBPF1Q3BBV0 1214 aa11.1□□□□□ -0.63
CLCN3P1-202ENST00000609203 TMEM131LA2VDJ0 1609 aa11.1□□□□□ -0.63
CLCN3P1-202ENST00000609203 MYO3AQ8NEV4 1616 aa11.1□□□□□ -0.63
CLCN3P1-202ENST00000609203 STAC3Q96MF2 364 aa11.09□□□□□ -0.63
CLCN3P1-202ENST00000609203 TNRQ92752 1358 aa11.09□□□□□ -0.63
CLCN3P1-202ENST00000609203 ADGRB3O60242 1522 aa11.09□□□□□ -0.63
CLCN3P1-202ENST00000609203 MYCNP04198 464 aaPredicted RBP11.09□□□□□ -0.63
CLCN3P1-202ENST00000609203 PRKRIP1Q9H875 184 aaPredicted RBP11.09□□□□□ -0.63
CLCN3P1-202ENST00000609203 RNF39Q9H2S5 420 aa11.08□□□□□ -0.64
CLCN3P1-202ENST00000609203 UBR1Q8IWV7 1749 aa11.08□□□□□ -0.64
CLCN3P1-202ENST00000609203 MYOM2P54296 1465 aa11.07□□□□□ -0.64
CLCN3P1-202ENST00000609203 PPLO60437 1756 aa11.07□□□□□ -0.64
CLCN3P1-202ENST00000609203 U3KPZ7 1027 aaPredicted RBP11.07□□□□□ -0.64
CLCN3P1-202ENST00000609203 A2ML1A8K2U0 1454 aa11.07□□□□□ -0.64
CLCN3P1-202ENST00000609203 ZBTB7CA1YPR0 619 aa11.06□□□□□ -0.64
CLCN3P1-202ENST00000609203 NUTM2DQ5VT03 806 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms