RNA–Protein interactions for RNA: ENST00000607959.5

USF2-216, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 5

Gene USF2, Length 1,920 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-216ENST00000607959 RPGRIP1LQ68CZ1 1315 aa30.96■■■□□ 2.55
USF2-216ENST00000607959 TNRQ92752 1358 aa30.95■■■□□ 2.54
USF2-216ENST00000607959 ADAMTSL3P82987 1691 aa30.95■■■□□ 2.54
USF2-216ENST00000607959 CARD11Q9BXL7 1154 aa30.94■■■□□ 2.54
USF2-216ENST00000607959 USP47Q96K76 1375 aa30.94■■■□□ 2.54
USF2-216ENST00000607959 LAMC1P11047 1609 aa30.93■■■□□ 2.54
USF2-216ENST00000607959 DIEXFQ68CQ4 756 aaKnown RBP30.92■■■□□ 2.54
USF2-216ENST00000607959 A2ML1A8K2U0 1454 aa30.92■■■□□ 2.54
USF2-216ENST00000607959 KIAA1210Q9ULL0 1709 aa30.91■■■□□ 2.54
USF2-216ENST00000607959 RIMS1Q86UR5 1692 aaKnown RBP30.89■■■□□ 2.54
USF2-216ENST00000607959 PIK3C2GO75747 1445 aa30.89■■■□□ 2.54
USF2-216ENST00000607959 NUTM2DQ5VT03 806 aaPredicted RBP30.86■■■□□ 2.53
USF2-216ENST00000607959 ZFYVE9O95405 1425 aa30.85■■■□□ 2.53
USF2-216ENST00000607959 CFAP70Q5T0N1 1121 aa30.85■■■□□ 2.53
USF2-216ENST00000607959 C11orf95C9JLR9 678 aaPredicted RBP30.84■■■□□ 2.53
USF2-216ENST00000607959 UBR1Q8IWV7 1749 aa30.81■■■□□ 2.52
USF2-216ENST00000607959 KDM5AP29375 1690 aaKnown RBP30.81■■■□□ 2.52
USF2-216ENST00000607959 IQGAP1P46940 1657 aa30.8■■■□□ 2.52
USF2-216ENST00000607959 VGFO15240 615 aaPredicted RBP30.8■■■□□ 2.52
USF2-216ENST00000607959 STAG3Q9UJ98 1225 aa30.8■■■□□ 2.52
USF2-216ENST00000607959 NLRP1Q9C000 1473 aa30.79■■■□□ 2.52
USF2-216ENST00000607959 WASHC2AQ641Q2 1341 aa30.79■■■□□ 2.52
USF2-216ENST00000607959 PLPPR3Q6T4P5 718 aa30.79■■■□□ 2.52
USF2-216ENST00000607959 ST20-MTHFSA0A0A6YYL1 179 aa30.78■■■□□ 2.52
USF2-216ENST00000607959 C14orf93Q9H972 538 aaKnown RBP30.77■■■□□ 2.52
USF2-216ENST00000607959 RIMS2Q9UQ26 1411 aa30.76■■■□□ 2.51
USF2-216ENST00000607959 ADGRB1O14514 1584 aa30.74■■■□□ 2.51
USF2-216ENST00000607959 SETBP1Q9Y6X0 1596 aa30.74■■■□□ 2.51
USF2-216ENST00000607959 POLR1AO95602 1720 aaPredicted RBP30.73■■■□□ 2.51
USF2-216ENST00000607959 SCAF11Q99590 1463 aaKnown RBP30.72■■■□□ 2.51
USF2-216ENST00000607959 MYO3AQ8NEV4 1616 aa30.72■■■□□ 2.51
USF2-216ENST00000607959 DDX10Q13206 875 aaKnown RBP30.71■■■□□ 2.51
USF2-216ENST00000607959 CCDC7Q96M83 1385 aa30.71■■■□□ 2.51
USF2-216ENST00000607959 KIF7Q2M1P5 1343 aa30.68■■■□□ 2.5
USF2-216ENST00000607959 TMEM2Q9UHN6 1383 aa30.67■■■□□ 2.5
USF2-216ENST00000607959 ASXL1Q8IXJ9 1541 aa30.67■■■□□ 2.5
USF2-216ENST00000607959 TESK2Q96S53 571 aa30.67■■■□□ 2.5
USF2-216ENST00000607959 SENP3Q9H4L4 574 aaPredicted RBP30.65■■■□□ 2.5
USF2-216ENST00000607959 TMEM132EQ6IEE7 984 aa30.65■■■□□ 2.5
USF2-216ENST00000607959 ALKQ9UM73 1620 aa30.62■■■□□ 2.49
USF2-216ENST00000607959 NRXN3Q9Y4C0 1643 aa30.62■■■□□ 2.49
USF2-216ENST00000607959 PTPRMP28827 1452 aa30.62■■■□□ 2.49
USF2-216ENST00000607959 SETD1AO15047 1707 aaKnown RBP30.61■■■□□ 2.49
USF2-216ENST00000607959 ARHGAP23Q9P227 1491 aa30.6■■■□□ 2.49
USF2-216ENST00000607959 CEP170BQ9Y4F5 1589 aaPredicted RBP30.59■■■□□ 2.49
USF2-216ENST00000607959 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.59■■■□□ 2.49
USF2-216ENST00000607959 SLIT1O75093 1534 aa30.59■■■□□ 2.49
USF2-216ENST00000607959 LTKP29376 864 aa30.57■■■□□ 2.48
USF2-216ENST00000607959 SETD1BQ9UPS6 1966 aaKnown RBP30.56■■■□□ 2.48
USF2-216ENST00000607959 DISP3Q9P2K9 1392 aa30.55■■■□□ 2.48
USF2-216ENST00000607959 MIER1Q8N108 512 aa30.55■■■□□ 2.48
USF2-216ENST00000607959 ZNF142P52746 1687 aaPredicted RBP30.55■■■□□ 2.48
USF2-216ENST00000607959 EIF3AQ14152 1382 aaKnown RBP30.53■■■□□ 2.48
USF2-216ENST00000607959 TRAK1Q9UPV9 953 aa30.53■■■□□ 2.48
USF2-216ENST00000607959 ARHGEF28Q8N1W1 1705 aaKnown RBP30.51■■■□□ 2.48
USF2-216ENST00000607959 HDGFP51858 240 aaKnown RBP30.5■■■□□ 2.47
USF2-216ENST00000607959 THEMISQ8N1K5 641 aaPredicted RBP30.5■■■□□ 2.47
USF2-216ENST00000607959 PLEKHG1Q9ULL1 1385 aa30.48■■■□□ 2.47
USF2-216ENST00000607959 TXNDC2Q86VQ3 553 aa30.47■■■□□ 2.47
USF2-216ENST00000607959 YTHDC2Q9H6S0 1430 aaKnown RBP30.47■■■□□ 2.47
USF2-216ENST00000607959 ADAMTS13Q76LX8 1427 aa30.47■■■□□ 2.47
USF2-216ENST00000607959 METP08581 1390 aa30.44■■■□□ 2.46
USF2-216ENST00000607959 POLR3GLQ9BT43 218 aa30.44■■■□□ 2.46
USF2-216ENST00000607959 CENPJQ9HC77 1338 aaPredicted RBP30.44■■■□□ 2.46
USF2-216ENST00000607959 QRICH2Q9H0J4 1663 aa30.44■■■□□ 2.46
USF2-216ENST00000607959 TMF1P82094 1093 aa30.43■■■□□ 2.46
USF2-216ENST00000607959 SBNO2Q9Y2G9 1366 aa30.43■■■□□ 2.46
USF2-216ENST00000607959 MED14O60244 1454 aa30.42■■■□□ 2.46
USF2-216ENST00000607959 STK26Q9P289 416 aa30.42■■■□□ 2.46
USF2-216ENST00000607959 KDM4FA0A1W2PPD8 638 aa30.41■■■□□ 2.46
USF2-216ENST00000607959 EID1Q9Y6B2 187 aa30.4■■■□□ 2.46
USF2-216ENST00000607959 LRPPRCP42704 1394 aaKnown RBP30.38■■■□□ 2.45
USF2-216ENST00000607959 DLC1Q96QB1 1528 aa30.35■■■□□ 2.45
USF2-216ENST00000607959 ABCC11Q96J66 1382 aa30.34■■■□□ 2.45
USF2-216ENST00000607959 BCANQ96GW7 911 aa30.33■■■□□ 2.45
USF2-216ENST00000607959 SLC26A8Q96RN1 970 aa30.31■■■□□ 2.44
USF2-216ENST00000607959 KNDC1Q76NI1 1749 aa30.3■■■□□ 2.44
USF2-216ENST00000607959 PRAM1Q96QH2 718 aa30.3■■■□□ 2.44
USF2-216ENST00000607959 TULP4Q9NRJ4 1543 aa30.3■■■□□ 2.44
USF2-216ENST00000607959 MYOM1P52179 1685 aa30.29■■■□□ 2.44
USF2-216ENST00000607959 TECPR2O15040 1411 aa30.29■■■□□ 2.44
USF2-216ENST00000607959 PTPRUQ92729 1446 aa30.28■■■□□ 2.44
USF2-216ENST00000607959 SAFB2Q14151 953 aaKnown RBP eCLIP30.28■■■□□ 2.44
USF2-216ENST00000607959 PLEKHH1Q9ULM0 1364 aa30.27■■■□□ 2.44
USF2-216ENST00000607959 SLC24A1O60721 1099 aa30.27■■■□□ 2.44
USF2-216ENST00000607959 TBX22Q9Y458 520 aa30.27■■■□□ 2.44
USF2-216ENST00000607959 DIP2AQ14689 1571 aa30.26■■■□□ 2.43
USF2-216ENST00000607959 ANKLE2Q86XL3 938 aa30.26■■■□□ 2.43
USF2-216ENST00000607959 CPS1P31327 1500 aa30.25■■■□□ 2.43
USF2-216ENST00000607959 CDCA8Q53HL2 280 aa30.25■■■□□ 2.43
USF2-216ENST00000607959 WAPLQ7Z5K2 1190 aa30.24■■■□□ 2.43
USF2-216ENST00000607959 ANP32CO43423 234 aa30.22■■■□□ 2.43
USF2-216ENST00000607959 POGKQ9P215 609 aa30.22■■■□□ 2.43
USF2-216ENST00000607959 ROBO2Q9HCK4 1378 aa30.2■■■□□ 2.42
USF2-216ENST00000607959 SIRT1Q96EB6 747 aa30.2■■■□□ 2.42
USF2-216ENST00000607959 FAM135BQ49AJ0 1406 aa30.19■■■□□ 2.42
USF2-216ENST00000607959 PER1O15534 1290 aaPredicted RBP30.19■■■□□ 2.42
USF2-216ENST00000607959 MINK1Q8N4C8 1332 aaPredicted RBP30.18■■■□□ 2.42
USF2-216ENST00000607959 PANK3Q9H999 370 aa30.18■■■□□ 2.42
USF2-216ENST00000607959 EVC2Q86UK5 1308 aa30.17■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 253.6 ms