RNA–Protein interactions for RNA: ENST00000607419.1

LINC01954-201, Transcript of long intergenic non-protein coding RNA 1954, humanhuman

TSL 1 (best) BASIC

Gene LINC01954, Length 461 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01954-201ENST00000607419 COL16A1Q07092 1604 aaPredicted RBP15.54■□□□□ 0.08
LINC01954-201ENST00000607419 IDI1Q13907 227 aa15.52■□□□□ 0.08
LINC01954-201ENST00000607419 EID1Q9Y6B2 187 aa15.52■□□□□ 0.08
LINC01954-201ENST00000607419 PRDM15P57071 1507 aaPredicted RBP15.52■□□□□ 0.07
LINC01954-201ENST00000607419 TRIM52Q96A61 297 aa15.51■□□□□ 0.07
LINC01954-201ENST00000607419 SLAIN2Q9P270 581 aa15.51■□□□□ 0.07
LINC01954-201ENST00000607419 ARHGAP31Q2M1Z3 1444 aa15.51■□□□□ 0.07
LINC01954-201ENST00000607419 NWD1Q149M9 1564 aa15.5■□□□□ 0.07
LINC01954-201ENST00000607419 DUOX2Q9NRD8 1548 aa15.5■□□□□ 0.07
LINC01954-201ENST00000607419 KDM5AP29375 1690 aaKnown RBP15.5■□□□□ 0.07
LINC01954-201ENST00000607419 JCADQ9P266 1359 aa15.49■□□□□ 0.07
LINC01954-201ENST00000607419 SRCAPQ6ZRS2 3230 aa15.48■□□□□ 0.07
LINC01954-201ENST00000607419 PCGF6Q9BYE7 350 aa15.48■□□□□ 0.07
LINC01954-201ENST00000607419 HFM1A2PYH4 1435 aa15.48■□□□□ 0.07
LINC01954-201ENST00000607419 KIF15Q9NS87 1388 aa15.48■□□□□ 0.07
LINC01954-201ENST00000607419 EFCAB6Q5THR3 1501 aa15.48■□□□□ 0.07
LINC01954-201ENST00000607419 NAIPQ13075 1403 aa15.47■□□□□ 0.07
LINC01954-201ENST00000607419 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.47■□□□□ 0.07
LINC01954-201ENST00000607419 RRP7BPQ9NSQ0 103 aa15.47■□□□□ 0.07
LINC01954-201ENST00000607419 ERBINQ96RT1 1412 aa15.44■□□□□ 0.06
LINC01954-201ENST00000607419 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.44■□□□□ 0.06
LINC01954-201ENST00000607419 STAG3Q9UJ98 1225 aa15.44■□□□□ 0.06
LINC01954-201ENST00000607419 SHPRHQ149N8 1683 aa15.44■□□□□ 0.06
LINC01954-201ENST00000607419 SETD5Q9C0A6 1442 aa15.43■□□□□ 0.06
LINC01954-201ENST00000607419 ANKRD50Q9ULJ7 1429 aa15.43■□□□□ 0.06
LINC01954-201ENST00000607419 NKTRP30414 1462 aaKnown RBP15.43■□□□□ 0.06
LINC01954-201ENST00000607419 MSH6P52701 1360 aa15.42■□□□□ 0.06
LINC01954-201ENST00000607419 DIP2AQ14689 1571 aa15.41■□□□□ 0.06
LINC01954-201ENST00000607419 ZNF772Q68DY9 489 aaPredicted RBP15.39■□□□□ 0.05
LINC01954-201ENST00000607419 NOS1P29475 1434 aa15.39■□□□□ 0.05
LINC01954-201ENST00000607419 UNC13BO14795 1591 aa15.39■□□□□ 0.05
LINC01954-201ENST00000607419 SPATA31A6Q5VVP1 1343 aa15.39■□□□□ 0.05
LINC01954-201ENST00000607419 ACIN1Q9UKV3 1341 aaKnown RBP15.39■□□□□ 0.05
LINC01954-201ENST00000607419 ADGRB3O60242 1522 aa15.38■□□□□ 0.05
LINC01954-201ENST00000607419 RXRBP28702 533 aa15.38■□□□□ 0.05
LINC01954-201ENST00000607419 AHDC1Q5TGY3 1603 aaPredicted RBP15.38■□□□□ 0.05
LINC01954-201ENST00000607419 RAB3GAP2Q9H2M9 1393 aa15.37■□□□□ 0.05
LINC01954-201ENST00000607419 ZFYVE9O95405 1425 aa15.37■□□□□ 0.05
LINC01954-201ENST00000607419 HRCP23327 699 aa15.37■□□□□ 0.05
LINC01954-201ENST00000607419 MAPK8IP2Q13387 824 aaPredicted RBP15.37■□□□□ 0.05
LINC01954-201ENST00000607419 MEX3CQ5U5Q3 659 aaKnown RBP15.37■□□□□ 0.05
LINC01954-201ENST00000607419 LMTK2Q8IWU2 1503 aa15.37■□□□□ 0.05
LINC01954-201ENST00000607419 NUTM2BA6NNL0 878 aaPredicted RBP15.36■□□□□ 0.05
LINC01954-201ENST00000607419 NUTM2EB1AL46 878 aaPredicted RBP15.36■□□□□ 0.05
LINC01954-201ENST00000607419 NUTM2AQ8IVF1 878 aaPredicted RBP15.36■□□□□ 0.05
LINC01954-201ENST00000607419 BCANQ96GW7 911 aa15.36■□□□□ 0.05
LINC01954-201ENST00000607419 TMEM131LA2VDJ0 1609 aa15.34■□□□□ 0.05
LINC01954-201ENST00000607419 IQGAP3Q86VI3 1631 aa15.33■□□□□ 0.04
LINC01954-201ENST00000607419 NUTM2DQ5VT03 806 aaPredicted RBP15.33■□□□□ 0.04
LINC01954-201ENST00000607419 AFF2P51816 1311 aa15.33■□□□□ 0.04
LINC01954-201ENST00000607419 CDK12Q9NYV4 1490 aaPredicted RBP15.33■□□□□ 0.04
LINC01954-201ENST00000607419 BRINP3Q76B58 766 aa15.32■□□□□ 0.04
LINC01954-201ENST00000607419 PLEKHG1Q9ULL1 1385 aa15.32■□□□□ 0.04
LINC01954-201ENST00000607419 TBX22Q9Y458 520 aa15.31■□□□□ 0.04
LINC01954-201ENST00000607419 RGS12O14924 1447 aa15.31■□□□□ 0.04
LINC01954-201ENST00000607419 ADAMTS13Q76LX8 1427 aa15.31■□□□□ 0.04
LINC01954-201ENST00000607419 RIMS2Q9UQ26 1411 aa15.31■□□□□ 0.04
LINC01954-201ENST00000607419 KANK1Q14678 1352 aa15.3■□□□□ 0.04
LINC01954-201ENST00000607419 PTPRUQ92729 1446 aa15.3■□□□□ 0.04
LINC01954-201ENST00000607419 C19orf44Q9H6X5 657 aa15.3■□□□□ 0.04
LINC01954-201ENST00000607419 NHSL1Q5SYE7 1610 aa15.29■□□□□ 0.04
LINC01954-201ENST00000607419 NCOA3Q9Y6Q9 1424 aa15.29■□□□□ 0.04
LINC01954-201ENST00000607419 DDX17Q92841 729 aaKnown RBP15.29■□□□□ 0.04
LINC01954-201ENST00000607419 QTRT2Q9H974 415 aaKnown RBP15.29■□□□□ 0.04
LINC01954-201ENST00000607419 SLC52A1Q9NWF4 448 aa15.29■□□□□ 0.04
LINC01954-201ENST00000607419 NUP155O75694 1391 aa15.28■□□□□ 0.04
LINC01954-201ENST00000607419 C14orf37Q86TY3 774 aa15.27■□□□□ 0.04
LINC01954-201ENST00000607419 CADPS2Q86UW7 1296 aa15.27■□□□□ 0.04
LINC01954-201ENST00000607419 EP400Q96L91 3159 aa15.26■□□□□ 0.03
LINC01954-201ENST00000607419 ATF3P18847 181 aa15.26■□□□□ 0.03
LINC01954-201ENST00000607419 SETBP1Q9Y6X0 1596 aa15.25■□□□□ 0.03
LINC01954-201ENST00000607419 ASXL1Q8IXJ9 1541 aa15.24■□□□□ 0.03
LINC01954-201ENST00000607419 C8orf37Q96NL8 207 aa15.24■□□□□ 0.03
LINC01954-201ENST00000607419 AMOTL2Q9Y2J4 779 aa15.24■□□□□ 0.03
LINC01954-201ENST00000607419 E9PCH4 1651 aa15.24■□□□□ 0.03
LINC01954-201ENST00000607419 PPP1R15AO75807 674 aaPredicted RBP15.23■□□□□ 0.03
LINC01954-201ENST00000607419 RBM6P78332 1123 aaKnown RBP15.23■□□□□ 0.03
LINC01954-201ENST00000607419 NRXN3Q9Y4C0 1643 aa15.22■□□□□ 0.03
LINC01954-201ENST00000607419 MST1RQ04912 1400 aa15.22■□□□□ 0.03
LINC01954-201ENST00000607419 MPHOSPH9Q99550 1183 aa15.21■□□□□ 0.03
LINC01954-201ENST00000607419 SLC4A1APQ9BWU0 796 aaKnown RBP15.21■□□□□ 0.03
LINC01954-201ENST00000607419 CHGAP10645 457 aaKnown RBP15.2■□□□□ 0.02
LINC01954-201ENST00000607419 PNPLA6Q8IY17 1366 aa15.2■□□□□ 0.02
LINC01954-201ENST00000607419 SPHKAPQ2M3C7 1700 aa15.2■□□□□ 0.02
LINC01954-201ENST00000607419 XRN1Q8IZH2 1706 aaKnown RBP15.2■□□□□ 0.02
LINC01954-201ENST00000607419 RPRD2Q5VT52 1461 aaKnown RBP15.2■□□□□ 0.02
LINC01954-201ENST00000607419 LRRC59Q96AG4 307 aaKnown RBP15.18■□□□□ 0.02
LINC01954-201ENST00000607419 DHX57Q6P158 1386 aaKnown RBP15.18■□□□□ 0.02
LINC01954-201ENST00000607419 TRPM2O94759 1503 aa15.17■□□□□ 0.02
LINC01954-201ENST00000607419 NALCNQ8IZF0 1738 aa15.17■□□□□ 0.02
LINC01954-201ENST00000607419 PIK3R4Q99570 1358 aa15.17■□□□□ 0.02
LINC01954-201ENST00000607419 ADAMTS2O95450 1211 aa15.17■□□□□ 0.02
LINC01954-201ENST00000607419 HDGFP51858 240 aaKnown RBP15.17■□□□□ 0.02
LINC01954-201ENST00000607419 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.16■□□□□ 0.02
LINC01954-201ENST00000607419 PPP4R3CPQ6ZMV5 832 aa15.15■□□□□ 0.02
LINC01954-201ENST00000607419 NGLY1Q96IV0 654 aa15.15■□□□□ 0.02
LINC01954-201ENST00000607419 DCCP43146 1447 aa15.14■□□□□ 0.01
LINC01954-201ENST00000607419 METP08581 1390 aa15.13■□□□□ 0.01
LINC01954-201ENST00000607419 ZRANB1Q9UGI0 708 aa15.12■□□□□ 0.01
LINC01954-201ENST00000607419 LAMC1P11047 1609 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms