RNA–Protein interactions for RNA: ENST00000605166.1

HMGB1P51-201, Transcript of high mobility group box 1 pseudogene 51, humanhuman

BASIC

Gene HMGB1P51, Length 638 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P51-201ENST00000605166 CLUAP1Q96AJ1 413 aa10.14□□□□□ -0.79
HMGB1P51-201ENST00000605166 PHOX2BQ99453 314 aa10.14□□□□□ -0.79
HMGB1P51-201ENST00000605166 TRAK2O60296 914 aa10.13□□□□□ -0.79
HMGB1P51-201ENST00000605166 COL9A1P20849 921 aa10.13□□□□□ -0.79
HMGB1P51-201ENST00000605166 HCSTQ9UBK5 93 aa10.13□□□□□ -0.79
HMGB1P51-201ENST00000605166 RABGEF1Q9UJ41 708 aa10.13□□□□□ -0.79
HMGB1P51-201ENST00000605166 BHMG1C9JSJ3 638 aaPredicted RBP10.12□□□□□ -0.79
HMGB1P51-201ENST00000605166 TSR1Q2NL82 804 aaKnown RBP10.12□□□□□ -0.79
HMGB1P51-201ENST00000605166 OATP04181 439 aa10.11□□□□□ -0.79
HMGB1P51-201ENST00000605166 BEGAINQ9BUH8 593 aa10.11□□□□□ -0.79
HMGB1P51-201ENST00000605166 FAM217BQ9NTX9 383 aaPredicted RBP10.11□□□□□ -0.79
HMGB1P51-201ENST00000605166 METTL3Q86U44 580 aaKnown RBP10.1□□□□□ -0.79
HMGB1P51-201ENST00000605166 LAPTM4BQ86VI4 370 aa10.09□□□□□ -0.79
HMGB1P51-201ENST00000605166 PACS2Q86VP3 889 aa10.09□□□□□ -0.79
HMGB1P51-201ENST00000605166 TRIM6-TRIM34B2RNG4 842 aa10.08□□□□□ -0.8
HMGB1P51-201ENST00000605166 TRIM26Q12899 539 aaPredicted RBP10.08□□□□□ -0.8
HMGB1P51-201ENST00000605166 PROX2Q3B8N5 592 aa10.08□□□□□ -0.8
HMGB1P51-201ENST00000605166 KCTD12Q96CX2 325 aaKnown RBP10.08□□□□□ -0.8
HMGB1P51-201ENST00000605166 KIAA1468Q9P260 1216 aa10.08□□□□□ -0.8
HMGB1P51-201ENST00000605166 CCDC82Q8N4S0 544 aa10.07□□□□□ -0.8
HMGB1P51-201ENST00000605166 PROSER2Q86WR7 435 aaPredicted RBP10.06□□□□□ -0.8
HMGB1P51-201ENST00000605166 PXYLP1Q8TE99 480 aa10.06□□□□□ -0.8
HMGB1P51-201ENST00000605166 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.06□□□□□ -0.8
HMGB1P51-201ENST00000605166 RBM27Q9P2N5 1060 aaKnown RBP10.06□□□□□ -0.8
HMGB1P51-201ENST00000605166 PADI6Q6TGC4 694 aa10.05□□□□□ -0.8
HMGB1P51-201ENST00000605166 PROCA1Q8NCQ7 364 aaPredicted RBP10.05□□□□□ -0.8
HMGB1P51-201ENST00000605166 WNT2BQ93097 391 aa10.05□□□□□ -0.8
HMGB1P51-201ENST00000605166 ADGRG1Q9Y653 693 aa10.05□□□□□ -0.8
HMGB1P51-201ENST00000605166 PRSS12P56730 875 aa10.04□□□□□ -0.8
HMGB1P51-201ENST00000605166 FAM161AQ3B820 660 aa10.04□□□□□ -0.8
HMGB1P51-201ENST00000605166 MYSM1Q5VVJ2 828 aa10.04□□□□□ -0.8
HMGB1P51-201ENST00000605166 POLR3EQ9NVU0 708 aa10.04□□□□□ -0.8
HMGB1P51-201ENST00000605166 ATP1B4Q9UN42 357 aaPredicted RBP10.04□□□□□ -0.8
HMGB1P51-201ENST00000605166 SPDYE5A6NIY4 337 aa10.03□□□□□ -0.8
HMGB1P51-201ENST00000605166 RAD21O60216 631 aa10.03□□□□□ -0.8
HMGB1P51-201ENST00000605166 DIXDC1Q155Q3 683 aa10.03□□□□□ -0.8
HMGB1P51-201ENST00000605166 TTC13Q8NBP0 860 aa10.03□□□□□ -0.8
HMGB1P51-201ENST00000605166 ANKK1Q8NFD2 765 aa10.03□□□□□ -0.8
HMGB1P51-201ENST00000605166 CDCA7LQ96GN5 454 aa10.03□□□□□ -0.8
HMGB1P51-201ENST00000605166 HRCP23327 699 aa10.02□□□□□ -0.81
HMGB1P51-201ENST00000605166 CLK2P49760 499 aaKnown RBP10.02□□□□□ -0.81
HMGB1P51-201ENST00000605166 FNBP4Q8N3X1 1017 aaPredicted RBP10.02□□□□□ -0.81
HMGB1P51-201ENST00000605166 FAM98CQ17RN3 349 aaKnown RBP10.01□□□□□ -0.81
HMGB1P51-201ENST00000605166 NLRP7Q8WX94 980 aa10.01□□□□□ -0.81
HMGB1P51-201ENST00000605166 BANK1Q8NDB2 785 aa10□□□□□ -0.81
HMGB1P51-201ENST00000605166 NBPF26B4DH59 902 aa9.99□□□□□ -0.81
HMGB1P51-201ENST00000605166 PDIA4P13667 645 aaKnown RBP9.99□□□□□ -0.81
HMGB1P51-201ENST00000605166 PTPN5P54829 565 aa9.99□□□□□ -0.81
HMGB1P51-201ENST00000605166 THSD4Q6ZMP0 1018 aa9.99□□□□□ -0.81
HMGB1P51-201ENST00000605166 POM121Q96HA1 1249 aa9.99□□□□□ -0.81
HMGB1P51-201ENST00000605166 TBC1D2Q9BYX2 928 aa9.99□□□□□ -0.81
HMGB1P51-201ENST00000605166 TSKSQ9UJT2 592 aa9.99□□□□□ -0.81
HMGB1P51-201ENST00000605166 RBM46Q8TBY0 533 aaKnown RBP9.98□□□□□ -0.81
HMGB1P51-201ENST00000605166 ZFRQ96KR1 1074 aaKnown RBP9.98□□□□□ -0.81
HMGB1P51-201ENST00000605166 ZNF777Q9ULD5 760 aaPredicted RBP9.98□□□□□ -0.81
HMGB1P51-201ENST00000605166 RFC5P40937 340 aa9.97□□□□□ -0.81
HMGB1P51-201ENST00000605166 HDGFP51858 240 aaKnown RBP9.97□□□□□ -0.81
HMGB1P51-201ENST00000605166 SEPT9Q9UHD8 586 aaPredicted RBP9.97□□□□□ -0.81
HMGB1P51-201ENST00000605166 SERPINA10Q9UK55 444 aa9.97□□□□□ -0.81
HMGB1P51-201ENST00000605166 TMEM259Q4ZIN3 620 aa9.95□□□□□ -0.82
HMGB1P51-201ENST00000605166 TATDN2Q93075 761 aa9.95□□□□□ -0.82
HMGB1P51-201ENST00000605166 CCDC97Q96F63 343 aaPredicted RBP9.95□□□□□ -0.82
HMGB1P51-201ENST00000605166 COG6Q9Y2V7 657 aa9.95□□□□□ -0.82
HMGB1P51-201ENST00000605166 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.94□□□□□ -0.82
HMGB1P51-201ENST00000605166 SOWAHBA6NEL2 793 aa9.94□□□□□ -0.82
HMGB1P51-201ENST00000605166 PPP2R2DQ66LE6 453 aa9.94□□□□□ -0.82
HMGB1P51-201ENST00000605166 LRCH3Q96II8 777 aa9.94□□□□□ -0.82
HMGB1P51-201ENST00000605166 PNMA3Q9UL41 463 aa9.94□□□□□ -0.82
HMGB1P51-201ENST00000605166 TUSC1Q2TAM9 212 aa9.93□□□□□ -0.82
HMGB1P51-201ENST00000605166 NYAP1Q6ZVC0 841 aa9.93□□□□□ -0.82
HMGB1P51-201ENST00000605166 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.93□□□□□ -0.82
HMGB1P51-201ENST00000605166 SNRKQ9NRH2 765 aa9.92□□□□□ -0.82
HMGB1P51-201ENST00000605166 LIMD1Q9UGP4 676 aa9.92□□□□□ -0.82
HMGB1P51-201ENST00000605166 ZBTB7CA1YPR0 619 aa9.91□□□□□ -0.82
HMGB1P51-201ENST00000605166 NUDT18Q6ZVK8 323 aa9.91□□□□□ -0.82
HMGB1P51-201ENST00000605166 RIC3Q7Z5B4 369 aa9.91□□□□□ -0.82
HMGB1P51-201ENST00000605166 SPIRE2Q8WWL2 714 aa9.91□□□□□ -0.82
HMGB1P51-201ENST00000605166 PLA2G2EQ9NZK7 142 aa9.91□□□□□ -0.82
HMGB1P51-201ENST00000605166 CD46P15529 392 aa9.9□□□□□ -0.82
HMGB1P51-201ENST00000605166 SLC4A3P48751 1232 aa9.9□□□□□ -0.82
HMGB1P51-201ENST00000605166 RCCD1A6NED2 376 aa9.89□□□□□ -0.83
HMGB1P51-201ENST00000605166 SOCS7O14512 581 aa9.89□□□□□ -0.83
HMGB1P51-201ENST00000605166 BCAMP50895 628 aa9.89□□□□□ -0.83
HMGB1P51-201ENST00000605166 FBXO31Q5XUX0 539 aaPredicted RBP9.89□□□□□ -0.83
HMGB1P51-201ENST00000605166 SULF1Q8IWU6 871 aa9.89□□□□□ -0.83
HMGB1P51-201ENST00000605166 FAM198AQ9UFP1 575 aa9.89□□□□□ -0.83
HMGB1P51-201ENST00000605166 TSR3Q9UJK0 312 aaKnown RBP9.89□□□□□ -0.83
HMGB1P51-201ENST00000605166 SMAPO00193 183 aa9.88□□□□□ -0.83
HMGB1P51-201ENST00000605166 SPTLC1O15269 473 aa9.88□□□□□ -0.83
HMGB1P51-201ENST00000605166 RANGAP1P46060 587 aaPredicted RBP9.88□□□□□ -0.83
HMGB1P51-201ENST00000605166 NECTIN2Q92692 538 aa9.88□□□□□ -0.83
HMGB1P51-201ENST00000605166 EYA1Q99502 592 aa9.88□□□□□ -0.83
HMGB1P51-201ENST00000605166 ZNF330Q9Y3S2 320 aaPredicted RBP9.88□□□□□ -0.83
HMGB1P51-201ENST00000605166 PPP4CP60510 307 aa9.87□□□□□ -0.83
HMGB1P51-201ENST00000605166 GJA5P36382 358 aa9.86□□□□□ -0.83
HMGB1P51-201ENST00000605166 RSBN1LQ6PCB5 846 aaPredicted RBP9.86□□□□□ -0.83
HMGB1P51-201ENST00000605166 NUTM1Q86Y26 1132 aa9.86□□□□□ -0.83
HMGB1P51-201ENST00000605166 MTMR14Q8NCE2 650 aa9.86□□□□□ -0.83
HMGB1P51-201ENST00000605166 SAMD7Q7Z3H4 446 aa9.85□□□□□ -0.83
HMGB1P51-201ENST00000605166 WWC1Q8IX03 1113 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms