RNA–Protein interactions for RNA: ENST00000604689.1

TUBE1-207, Transcript of tubulin epsilon 1, humanhuman

Gene TUBE1, Length 3,610 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-207ENST00000604689 ANKRD62A6NC57 917 aa9.2□□□□□ -0.94
TUBE1-207ENST00000604689 TMTC2Q8N394 836 aa9.19□□□□□ -0.94
TUBE1-207ENST00000604689 WRNQ14191 1432 aaPredicted RBP eCLIP9.19□□□□□ -0.94
TUBE1-207ENST00000604689 PIK3R5Q8WYR1 880 aa9.19□□□□□ -0.94
TUBE1-207ENST00000604689 SIRT1Q96EB6 747 aa9.19□□□□□ -0.94
TUBE1-207ENST00000604689 LARP6Q9BRS8 491 aaKnown RBP9.19□□□□□ -0.94
TUBE1-207ENST00000604689 NESP48681 1621 aa9.19□□□□□ -0.94
TUBE1-207ENST00000604689 COG6Q9Y2V7 657 aa9.19□□□□□ -0.94
TUBE1-207ENST00000604689 CCDC88BA6NC98 1476 aa9.18□□□□□ -0.94
TUBE1-207ENST00000604689 GSE1Q14687 1217 aa9.18□□□□□ -0.94
TUBE1-207ENST00000604689 DHX57Q6P158 1386 aaKnown RBP9.18□□□□□ -0.94
TUBE1-207ENST00000604689 MARCH6O60337 910 aa9.18□□□□□ -0.94
TUBE1-207ENST00000604689 MS4A1P11836 297 aa9.17□□□□□ -0.94
TUBE1-207ENST00000604689 CALD1Q05682 793 aaKnown RBP9.17□□□□□ -0.94
TUBE1-207ENST00000604689 GIMAP6Q6P9H5 292 aa9.17□□□□□ -0.94
TUBE1-207ENST00000604689 PROCA1Q8NCQ7 364 aaPredicted RBP9.17□□□□□ -0.94
TUBE1-207ENST00000604689 SPATA32Q96LK8 384 aa9.17□□□□□ -0.94
TUBE1-207ENST00000604689 GDPD2Q9HCC8 539 aa9.17□□□□□ -0.94
TUBE1-207ENST00000604689 POLR3EQ9NVU0 708 aa9.17□□□□□ -0.94
TUBE1-207ENST00000604689 HNRNPUQ00839 825 aaKnown RBP eCLIP9.16□□□□□ -0.94
TUBE1-207ENST00000604689 SNRKQ9NRH2 765 aa9.16□□□□□ -0.94
TUBE1-207ENST00000604689 AMOTL2Q9Y2J4 779 aa9.16□□□□□ -0.94
TUBE1-207ENST00000604689 FECHP22830 423 aa9.16□□□□□ -0.94
TUBE1-207ENST00000604689 IGSF5Q9NSI5 407 aa9.16□□□□□ -0.94
TUBE1-207ENST00000604689 CADPSQ9ULU8 1353 aa9.16□□□□□ -0.94
TUBE1-207ENST00000604689 CTTNBP2Q8WZ74 1663 aa9.16□□□□□ -0.94
TUBE1-207ENST00000604689 ABCB7O75027 752 aa9.16□□□□□ -0.94
TUBE1-207ENST00000604689 SND1Q7KZF4 910 aaKnown RBP eCLIP9.16□□□□□ -0.94
TUBE1-207ENST00000604689 PCMTD1Q96MG8 357 aaPredicted RBP9.16□□□□□ -0.94
TUBE1-207ENST00000604689 SIN3AQ96ST3 1273 aa9.16□□□□□ -0.94
TUBE1-207ENST00000604689 NOP58Q9Y2X3 529 aaKnown RBP9.16□□□□□ -0.94
TUBE1-207ENST00000604689 ERICH3Q5RHP9 1530 aa9.15□□□□□ -0.94
TUBE1-207ENST00000604689 NUBP1P53384 320 aa9.15□□□□□ -0.94
TUBE1-207ENST00000604689 ZBTB47Q9UFB7 747 aaPredicted RBP9.15□□□□□ -0.94
TUBE1-207ENST00000604689 TMX4Q9H1E5 349 aaPredicted RBP9.15□□□□□ -0.94
TUBE1-207ENST00000604689 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.15□□□□□ -0.94
TUBE1-207ENST00000604689 HSP90AB4PQ58FF6 505 aa9.14□□□□□ -0.95
TUBE1-207ENST00000604689 C11orf95C9JLR9 678 aaPredicted RBP9.14□□□□□ -0.95
TUBE1-207ENST00000604689 AXDND1Q5T1B0 1012 aaPredicted RBP9.14□□□□□ -0.95
TUBE1-207ENST00000604689 SLC52A1Q9NWF4 448 aa9.14□□□□□ -0.95
TUBE1-207ENST00000604689 ADAMTS12P58397 1594 aa9.14□□□□□ -0.95
TUBE1-207ENST00000604689 NCKAP5LQ9HCH0 1330 aa9.13□□□□□ -0.95
TUBE1-207ENST00000604689 CHMP4CQ96CF2 233 aa9.13□□□□□ -0.95
TUBE1-207ENST00000604689 EIF4G3O43432 1585 aaKnown RBP9.13□□□□□ -0.95
TUBE1-207ENST00000604689 REPIN1Q9BWE0 567 aaKnown RBP9.13□□□□□ -0.95
TUBE1-207ENST00000604689 MFRPQ9BY79 579 aa9.13□□□□□ -0.95
TUBE1-207ENST00000604689 BCORL1Q5H9F3 1711 aa9.12□□□□□ -0.95
TUBE1-207ENST00000604689 SEMA3FQ13275 785 aa9.12□□□□□ -0.95
TUBE1-207ENST00000604689 ZNF513Q8N8E2 541 aaPredicted RBP9.12□□□□□ -0.95
TUBE1-207ENST00000604689 GLMNQ92990 594 aa9.12□□□□□ -0.95
TUBE1-207ENST00000604689 MRC2Q9UBG0 1479 aa9.12□□□□□ -0.95
TUBE1-207ENST00000604689 OSCARQ8IYS5 282 aa9.12□□□□□ -0.95
TUBE1-207ENST00000604689 VTI1AQ96AJ9 217 aa9.12□□□□□ -0.95
TUBE1-207ENST00000604689 PRDM4Q9UKN5 801 aa9.11□□□□□ -0.95
TUBE1-207ENST00000604689 LOC102724159A0A0B4J2E5 919 aa9.11□□□□□ -0.95
TUBE1-207ENST00000604689 PWP2Q15269 919 aaKnown RBP9.11□□□□□ -0.95
TUBE1-207ENST00000604689 TNIKQ9UKE5 1360 aa9.11□□□□□ -0.95
TUBE1-207ENST00000604689 CHD1O14646 1710 aa9.11□□□□□ -0.95
TUBE1-207ENST00000604689 ANKRD13AQ8IZ07 590 aa9.11□□□□□ -0.95
TUBE1-207ENST00000604689 PNNQ9H307 717 aaKnown RBP9.11□□□□□ -0.95
TUBE1-207ENST00000604689 CREBRFQ8IUR6 639 aa9.1□□□□□ -0.95
TUBE1-207ENST00000604689 PEX14O75381 377 aa9.1□□□□□ -0.95
TUBE1-207ENST00000604689 NGEFQ8N5V2 710 aa9.1□□□□□ -0.95
TUBE1-207ENST00000604689 MICAL1Q8TDZ2 1067 aa9.1□□□□□ -0.95
TUBE1-207ENST00000604689 MAFGO15525 162 aa9.1□□□□□ -0.95
TUBE1-207ENST00000604689 RBM27Q9P2N5 1060 aaKnown RBP9.09□□□□□ -0.95
TUBE1-207ENST00000604689 ABCA10Q8WWZ4 1543 aa9.09□□□□□ -0.95
TUBE1-207ENST00000604689 ANP32CO43423 234 aa9.09□□□□□ -0.95
TUBE1-207ENST00000604689 KANK4Q5T7N3 995 aaPredicted RBP9.09□□□□□ -0.95
TUBE1-207ENST00000604689 GOLIM4O00461 696 aa9.09□□□□□ -0.96
TUBE1-207ENST00000604689 RAB11FIP3O75154 756 aa9.09□□□□□ -0.96
TUBE1-207ENST00000604689 TCF3P15923 654 aa9.09□□□□□ -0.96
TUBE1-207ENST00000604689 ABL2P42684 1182 aa9.09□□□□□ -0.96
TUBE1-207ENST00000604689 GIGYF2Q6Y7W6 1299 aaKnown RBP9.09□□□□□ -0.96
TUBE1-207ENST00000604689 SGSM3Q96HU1 749 aa9.09□□□□□ -0.96
TUBE1-207ENST00000604689 TMEM51Q9NW97 253 aa9.08□□□□□ -0.96
TUBE1-207ENST00000604689 URB2Q14146 1524 aaKnown RBP9.08□□□□□ -0.96
TUBE1-207ENST00000604689 TAGLNQ01995 201 aaKnown RBP9.07□□□□□ -0.96
TUBE1-207ENST00000604689 DRC1Q96MC2 740 aa9.07□□□□□ -0.96
TUBE1-207ENST00000604689 SH3BP1Q9Y3L3 701 aa9.07□□□□□ -0.96
TUBE1-207ENST00000604689 NUTM2FA1L443 756 aa9.07□□□□□ -0.96
TUBE1-207ENST00000604689 GIPC2Q8TF65 315 aa9.07□□□□□ -0.96
TUBE1-207ENST00000604689 EXOC8Q8IYI6 725 aa9.06□□□□□ -0.96
TUBE1-207ENST00000604689 TXNDC2Q86VQ3 553 aa9.06□□□□□ -0.96
TUBE1-207ENST00000604689 BANK1Q8NDB2 785 aa9.06□□□□□ -0.96
TUBE1-207ENST00000604689 ZBTB9Q96C00 473 aa9.06□□□□□ -0.96
TUBE1-207ENST00000604689 SAMD9Q5K651 1589 aa9.06□□□□□ -0.96
TUBE1-207ENST00000604689 GPR37O15354 613 aa9.06□□□□□ -0.96
TUBE1-207ENST00000604689 PPP1R15AO75807 674 aaPredicted RBP9.06□□□□□ -0.96
TUBE1-207ENST00000604689 C9orf131Q5VYM1 1079 aa9.05□□□□□ -0.96
TUBE1-207ENST00000604689 KCNA1Q09470 495 aa9.05□□□□□ -0.96
TUBE1-207ENST00000604689 CCDC184Q52MB2 194 aa9.05□□□□□ -0.96
TUBE1-207ENST00000604689 FBXO31Q5XUX0 539 aaPredicted RBP9.05□□□□□ -0.96
TUBE1-207ENST00000604689 SREK1Q8WXA9 508 aaKnown RBP9.05□□□□□ -0.96
TUBE1-207ENST00000604689 CSB-PGBD3P0DP91 1061 aa9.04□□□□□ -0.96
TUBE1-207ENST00000604689 ZNF16P17020 682 aaPredicted RBP9.04□□□□□ -0.96
TUBE1-207ENST00000604689 EP400NLQ6ZTU2 488 aa9.04□□□□□ -0.96
TUBE1-207ENST00000604689 RASEFQ8IZ41 740 aa9.04□□□□□ -0.96
TUBE1-207ENST00000604689 RIPOR2Q9Y4F9 1068 aa9.04□□□□□ -0.96
TUBE1-207ENST00000604689 PPME1Q9Y570 386 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms