RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 CCDC144AA2RUR9 1427 aa15.9■□□□□ 0.14
CDCA3-212ENST00000604599 KIAA0556O60303 1618 aa15.89■□□□□ 0.13
CDCA3-212ENST00000604599 PDS5BQ9NTI5 1447 aa15.89■□□□□ 0.13
CDCA3-212ENST00000604599 CGNL1Q0VF96 1302 aa15.89■□□□□ 0.13
CDCA3-212ENST00000604599 GPRASP1Q5JY77 1395 aa15.89■□□□□ 0.13
CDCA3-212ENST00000604599 TRMT2AQ8IZ69 625 aaKnown RBP15.89■□□□□ 0.13
CDCA3-212ENST00000604599 DMRT2Q9Y5R5 561 aa15.88■□□□□ 0.13
CDCA3-212ENST00000604599 EIF4G3O43432 1585 aaKnown RBP15.88■□□□□ 0.13
CDCA3-212ENST00000604599 PRDM15P57071 1507 aaPredicted RBP15.88■□□□□ 0.13
CDCA3-212ENST00000604599 DISP1Q96F81 1524 aa15.88■□□□□ 0.13
CDCA3-212ENST00000604599 TRAK2O60296 914 aa15.88■□□□□ 0.13
CDCA3-212ENST00000604599 ADAMTS12P58397 1594 aa15.88■□□□□ 0.13
CDCA3-212ENST00000604599 MAGI2Q86UL8 1455 aa15.88■□□□□ 0.13
CDCA3-212ENST00000604599 TARBP1Q13395 1621 aaKnown RBP15.88■□□□□ 0.13
CDCA3-212ENST00000604599 ERBB4Q15303 1308 aa15.87■□□□□ 0.13
CDCA3-212ENST00000604599 TSPY4P0CV99 314 aa15.87■□□□□ 0.13
CDCA3-212ENST00000604599 TSPY10P0CW01 314 aa15.87■□□□□ 0.13
CDCA3-212ENST00000604599 A2MP01023 1474 aa15.86■□□□□ 0.13
CDCA3-212ENST00000604599 MRE11P49959 708 aa15.86■□□□□ 0.13
CDCA3-212ENST00000604599 MYH16Q9H6N6 1097 aa15.86■□□□□ 0.13
CDCA3-212ENST00000604599 CDC42BPAQ5VT25 1732 aa15.85■□□□□ 0.13
CDCA3-212ENST00000604599 PTPRGP23470 1445 aa15.85■□□□□ 0.13
CDCA3-212ENST00000604599 ESPNB1AK53 854 aa15.85■□□□□ 0.13
CDCA3-212ENST00000604599 CLASP1Q7Z460 1538 aa15.85■□□□□ 0.13
CDCA3-212ENST00000604599 AMER1Q5JTC6 1135 aaPredicted RBP15.84■□□□□ 0.13
CDCA3-212ENST00000604599 GRPEL1Q9HAV7 217 aa15.84■□□□□ 0.13
CDCA3-212ENST00000604599 E9PSI1 815 aa15.84■□□□□ 0.13
CDCA3-212ENST00000604599 PDE3AQ14432 1141 aa15.84■□□□□ 0.13
CDCA3-212ENST00000604599 CENPJQ9HC77 1338 aaPredicted RBP15.84■□□□□ 0.13
CDCA3-212ENST00000604599 FAM135AQ9P2D6 1515 aa15.83■□□□□ 0.13
CDCA3-212ENST00000604599 WDR7Q9Y4E6 1490 aa15.83■□□□□ 0.12
CDCA3-212ENST00000604599 PLB1Q6P1J6 1458 aa15.83■□□□□ 0.12
CDCA3-212ENST00000604599 CHMP5Q9NZZ3 219 aa15.82■□□□□ 0.12
CDCA3-212ENST00000604599 PDZRN3Q9UPQ7 1066 aa15.82■□□□□ 0.12
CDCA3-212ENST00000604599 HNRNPMP52272 730 aaKnown RBP eCLIP15.81■□□□□ 0.12
CDCA3-212ENST00000604599 PCDHB15Q9Y5E8 787 aa15.81■□□□□ 0.12
CDCA3-212ENST00000604599 SHANK2Q9UPX8 1470 aa15.81■□□□□ 0.12
CDCA3-212ENST00000604599 ADCY10Q96PN6 1610 aa15.81■□□□□ 0.12
CDCA3-212ENST00000604599 LAMC1P11047 1609 aa15.8■□□□□ 0.12
CDCA3-212ENST00000604599 TRIM44Q96DX7 344 aaPredicted RBP15.8■□□□□ 0.12
CDCA3-212ENST00000604599 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.8■□□□□ 0.12
CDCA3-212ENST00000604599 TNNQ9UQP3 1299 aa15.8■□□□□ 0.12
CDCA3-212ENST00000604599 MFAP1P55081 439 aaKnown RBP15.79■□□□□ 0.12
CDCA3-212ENST00000604599 MYO5CQ9NQX4 1742 aa15.79■□□□□ 0.12
CDCA3-212ENST00000604599 PMFBP1Q8TBY8 1022 aa15.79■□□□□ 0.12
CDCA3-212ENST00000604599 ABCC10Q5T3U5 1492 aa15.78■□□□□ 0.12
CDCA3-212ENST00000604599 PIK3C2GO75747 1445 aa15.78■□□□□ 0.12
CDCA3-212ENST00000604599 PLA2R1Q13018 1463 aa15.78■□□□□ 0.12
CDCA3-212ENST00000604599 RLBP1P12271 317 aa15.78■□□□□ 0.12
CDCA3-212ENST00000604599 BCL2L13Q9BXK5 485 aa15.78■□□□□ 0.12
CDCA3-212ENST00000604599 C22orf23Q9BZE7 217 aa15.77■□□□□ 0.12
CDCA3-212ENST00000604599 NINLQ9Y2I6 1382 aa15.77■□□□□ 0.11
CDCA3-212ENST00000604599 ABCC2Q92887 1545 aa15.77■□□□□ 0.11
CDCA3-212ENST00000604599 NEUROD2Q15784 382 aa15.76■□□□□ 0.11
CDCA3-212ENST00000604599 ASXL1Q8IXJ9 1541 aa15.76■□□□□ 0.11
CDCA3-212ENST00000604599 DDX11L8A8MPP1 907 aa15.76■□□□□ 0.11
CDCA3-212ENST00000604599 EIF2AK4Q9P2K8 1649 aaKnown RBP15.76■□□□□ 0.11
CDCA3-212ENST00000604599 GAS2L3Q86XJ1 694 aa15.74■□□□□ 0.11
CDCA3-212ENST00000604599 RTEL1-TNFRSF6BF6WH68 1400 aa15.74■□□□□ 0.11
CDCA3-212ENST00000604599 HSCBQ8IWL3 235 aa15.73■□□□□ 0.11
CDCA3-212ENST00000604599 WWC1Q8IX03 1113 aa15.73■□□□□ 0.11
CDCA3-212ENST00000604599 CCDC141Q6ZP82 1450 aa15.73■□□□□ 0.11
CDCA3-212ENST00000604599 PLEKHD1A6NEE1 506 aa15.72■□□□□ 0.11
CDCA3-212ENST00000604599 TPM2P07951 284 aa15.72■□□□□ 0.11
CDCA3-212ENST00000604599 RARSP54136 660 aaKnown RBP15.72■□□□□ 0.11
CDCA3-212ENST00000604599 KIAA1211Q6ZU35 1233 aa15.72■□□□□ 0.11
CDCA3-212ENST00000604599 ZNF692Q9BU19 519 aaPredicted RBP15.72■□□□□ 0.11
CDCA3-212ENST00000604599 RRP7AQ9Y3A4 280 aaKnown RBP15.72■□□□□ 0.11
CDCA3-212ENST00000604599 RWDD1Q9H446 243 aaPredicted RBP15.71■□□□□ 0.11
CDCA3-212ENST00000604599 PLXNC1O60486 1568 aa15.71■□□□□ 0.11
CDCA3-212ENST00000604599 ZMYM3Q14202 1370 aa15.71■□□□□ 0.1
CDCA3-212ENST00000604599 SYNMO15061 1565 aa15.71■□□□□ 0.1
CDCA3-212ENST00000604599 ISY1Q9ULR0 285 aaKnown RBP15.71■□□□□ 0.1
CDCA3-212ENST00000604599 PDCL3Q9H2J4 239 aa15.7■□□□□ 0.1
CDCA3-212ENST00000604599 NUP160Q12769 1436 aa15.7■□□□□ 0.1
CDCA3-212ENST00000604599 RNF17Q9BXT8 1623 aaKnown RBP15.69■□□□□ 0.1
CDCA3-212ENST00000604599 TNPO1Q92973 898 aaKnown RBP15.69■□□□□ 0.1
CDCA3-212ENST00000604599 SYNJ2O15056 1496 aa15.69■□□□□ 0.1
CDCA3-212ENST00000604599 CDCA8Q53HL2 280 aa15.68■□□□□ 0.1
CDCA3-212ENST00000604599 MAGI1Q96QZ7 1491 aaPredicted RBP15.67■□□□□ 0.1
CDCA3-212ENST00000604599 MYOM1P52179 1685 aa15.66■□□□□ 0.1
CDCA3-212ENST00000604599 RBM10P98175 930 aaKnown RBP15.66■□□□□ 0.1
CDCA3-212ENST00000604599 AAMPQ13685 434 aa15.65■□□□□ 0.1
CDCA3-212ENST00000604599 FOXD4L1Q9NU39 408 aa15.65■□□□□ 0.1
CDCA3-212ENST00000604599 NGEFQ8N5V2 710 aa15.64■□□□□ 0.09
CDCA3-212ENST00000604599 ARHGEF5Q12774 1597 aa15.64■□□□□ 0.09
CDCA3-212ENST00000604599 DDIT3P35638 169 aa15.64■□□□□ 0.09
CDCA3-212ENST00000604599 GBP4Q96PP9 640 aa15.64■□□□□ 0.09
CDCA3-212ENST00000604599 NPC1L1Q9UHC9 1359 aa15.64■□□□□ 0.09
CDCA3-212ENST00000604599 IQGAP1P46940 1657 aa15.64■□□□□ 0.09
CDCA3-212ENST00000604599 NCOA3Q9Y6Q9 1424 aa15.64■□□□□ 0.09
CDCA3-212ENST00000604599 HSP90AB1P08238 724 aaKnown RBP15.63■□□□□ 0.09
CDCA3-212ENST00000604599 GRIN2AQ12879 1464 aa15.63■□□□□ 0.09
CDCA3-212ENST00000604599 MVPQ14764 893 aaKnown RBP15.63■□□□□ 0.09
CDCA3-212ENST00000604599 TNNT2P45379 298 aaPredicted RBP15.62■□□□□ 0.09
CDCA3-212ENST00000604599 NASPP49321 788 aaPredicted RBP15.62■□□□□ 0.09
CDCA3-212ENST00000604599 FTSJ3Q8IY81 847 aaKnown RBP15.62■□□□□ 0.09
CDCA3-212ENST00000604599 UNC13BO14795 1591 aa15.61■□□□□ 0.09
CDCA3-212ENST00000604599 CCDC173Q0VFZ6 552 aa15.61■□□□□ 0.09
CDCA3-212ENST00000604599 ZSCAN30Q86W11 494 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms