RNA–Protein interactions for RNA: ENST00000604367.1

CCDC12-211, Transcript of coiled-coil domain containing 12, humanhuman

Gene CCDC12, Length 2,412 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-211ENST00000604367 MYOM2P54296 1465 aa20.53■□□□□ 0.88
CCDC12-211ENST00000604367 NOS1P29475 1434 aa20.53■□□□□ 0.88
CCDC12-211ENST00000604367 ADGRB3O60242 1522 aa20.52■□□□□ 0.88
CCDC12-211ENST00000604367 PANK3Q9H999 370 aa20.52■□□□□ 0.88
CCDC12-211ENST00000604367 TMC1Q8TDI8 760 aa20.52■□□□□ 0.87
CCDC12-211ENST00000604367 IFT172Q9UG01 1749 aa20.51■□□□□ 0.87
CCDC12-211ENST00000604367 PER1O15534 1290 aaPredicted RBP20.51■□□□□ 0.87
CCDC12-211ENST00000604367 FKBP8Q14318 412 aa20.51■□□□□ 0.87
CCDC12-211ENST00000604367 SIGLEC1Q9BZZ2 1709 aa20.5■□□□□ 0.87
CCDC12-211ENST00000604367 RALBP1Q15311 655 aa20.5■□□□□ 0.87
CCDC12-211ENST00000604367 KIAA1210Q9ULL0 1709 aa20.49■□□□□ 0.87
CCDC12-211ENST00000604367 EIF3AQ14152 1382 aaKnown RBP20.48■□□□□ 0.87
CCDC12-211ENST00000604367 MYBBP1AQ9BQG0 1328 aaKnown RBP20.48■□□□□ 0.87
CCDC12-211ENST00000604367 CC2D1BQ5T0F9 858 aaKnown RBP20.48■□□□□ 0.87
CCDC12-211ENST00000604367 KTN1Q86UP2 1357 aaKnown RBP20.48■□□□□ 0.87
CCDC12-211ENST00000604367 NUTM2DQ5VT03 806 aaPredicted RBP20.47■□□□□ 0.87
CCDC12-211ENST00000604367 ZMYM4Q5VZL5 1548 aa20.47■□□□□ 0.87
CCDC12-211ENST00000604367 NEFLP07196 543 aa20.45■□□□□ 0.86
CCDC12-211ENST00000604367 PNISRQ8TF01 805 aaKnown RBP20.45■□□□□ 0.86
CCDC12-211ENST00000604367 BCANQ96GW7 911 aa20.45■□□□□ 0.86
CCDC12-211ENST00000604367 NRXN1Q9ULB1 1477 aa20.45■□□□□ 0.86
CCDC12-211ENST00000604367 ZBED9Q6R2W3 1325 aa20.45■□□□□ 0.86
CCDC12-211ENST00000604367 SYNMO15061 1565 aa20.45■□□□□ 0.86
CCDC12-211ENST00000604367 SENP3-EIF4A1A0A087X0R7 540 aa20.44■□□□□ 0.86
CCDC12-211ENST00000604367 IDI1Q13907 227 aa20.44■□□□□ 0.86
CCDC12-211ENST00000604367 CDCA8Q53HL2 280 aa20.44■□□□□ 0.86
CCDC12-211ENST00000604367 ZC3H13Q5T200 1668 aaKnown RBP20.44■□□□□ 0.86
CCDC12-211ENST00000604367 PARD3Q8TEW0 1356 aa20.43■□□□□ 0.86
CCDC12-211ENST00000604367 ARHGAP31Q2M1Z3 1444 aa20.43■□□□□ 0.86
CCDC12-211ENST00000604367 PPLO60437 1756 aa20.43■□□□□ 0.86
CCDC12-211ENST00000604367 BRD4O60885 1362 aaPredicted RBP20.41■□□□□ 0.86
CCDC12-211ENST00000604367 RPGRIP1LQ68CZ1 1315 aa20.41■□□□□ 0.86
CCDC12-211ENST00000604367 PIK3C2GO75747 1445 aa20.41■□□□□ 0.86
CCDC12-211ENST00000604367 TMEM132EQ6IEE7 984 aa20.41■□□□□ 0.86
CCDC12-211ENST00000604367 SENP3Q9H4L4 574 aaPredicted RBP20.41■□□□□ 0.86
CCDC12-211ENST00000604367 NLRP13Q86W25 1043 aa20.4■□□□□ 0.86
CCDC12-211ENST00000604367 C14orf93Q9H972 538 aaKnown RBP20.4■□□□□ 0.86
CCDC12-211ENST00000604367 TRAK1Q9UPV9 953 aa20.4■□□□□ 0.86
CCDC12-211ENST00000604367 PIK3C2BO00750 1634 aa20.4■□□□□ 0.86
CCDC12-211ENST00000604367 FBXO31Q5XUX0 539 aaPredicted RBP20.39■□□□□ 0.86
CCDC12-211ENST00000604367 MLECQ14165 292 aa20.38■□□□□ 0.85
CCDC12-211ENST00000604367 KIF13AQ9H1H9 1805 aa20.38■□□□□ 0.85
CCDC12-211ENST00000604367 SLC52A1Q9NWF4 448 aa20.38■□□□□ 0.85
CCDC12-211ENST00000604367 KNSTRNQ9Y448 316 aa20.37■□□□□ 0.85
CCDC12-211ENST00000604367 VGFO15240 615 aaPredicted RBP20.36■□□□□ 0.85
CCDC12-211ENST00000604367 PREX1Q8TCU6 1659 aa20.35■□□□□ 0.85
CCDC12-211ENST00000604367 SETBP1Q9Y6X0 1596 aa20.34■□□□□ 0.85
CCDC12-211ENST00000604367 CENPJQ9HC77 1338 aaPredicted RBP20.34■□□□□ 0.85
CCDC12-211ENST00000604367 ERVK-7P63135 1459 aa20.34■□□□□ 0.85
CCDC12-211ENST00000604367 NEXMIFQ5QGS0 1516 aa20.34■□□□□ 0.85
CCDC12-211ENST00000604367 KDM5AP29375 1690 aaKnown RBP20.33■□□□□ 0.85
CCDC12-211ENST00000604367 SLC24A1O60721 1099 aa20.33■□□□□ 0.84
CCDC12-211ENST00000604367 LRPPRCP42704 1394 aaKnown RBP20.33■□□□□ 0.84
CCDC12-211ENST00000604367 IRX6P78412 446 aaPredicted RBP20.32■□□□□ 0.84
CCDC12-211ENST00000604367 ADGRB1O14514 1584 aa20.32■□□□□ 0.84
CCDC12-211ENST00000604367 MYOM1P52179 1685 aa20.31■□□□□ 0.84
CCDC12-211ENST00000604367 MYO5BQ9ULV0 1848 aa20.31■□□□□ 0.84
CCDC12-211ENST00000604367 REREQ9P2R6 1566 aa20.3■□□□□ 0.84
CCDC12-211ENST00000604367 AMER1Q5JTC6 1135 aaPredicted RBP20.3■□□□□ 0.84
CCDC12-211ENST00000604367 AGLP35573 1532 aa20.3■□□□□ 0.84
CCDC12-211ENST00000604367 STAG3Q9UJ98 1225 aa20.29■□□□□ 0.84
CCDC12-211ENST00000604367 MYO3AQ8NEV4 1616 aa20.28■□□□□ 0.84
CCDC12-211ENST00000604367 CLTCQ00610 1675 aaKnown RBP20.28■□□□□ 0.84
CCDC12-211ENST00000604367 TMEM131LA2VDJ0 1609 aa20.27■□□□□ 0.84
CCDC12-211ENST00000604367 SBNO2Q9Y2G9 1366 aa20.27■□□□□ 0.84
CCDC12-211ENST00000604367 PPP6R1Q9UPN7 881 aa20.26■□□□□ 0.83
CCDC12-211ENST00000604367 SALL2Q9Y467 1007 aaPredicted RBP20.26■□□□□ 0.83
CCDC12-211ENST00000604367 ASXL1Q8IXJ9 1541 aa20.25■□□□□ 0.83
CCDC12-211ENST00000604367 QRICH2Q9H0J4 1663 aa20.25■□□□□ 0.83
CCDC12-211ENST00000604367 STK26Q9P289 416 aa20.24■□□□□ 0.83
CCDC12-211ENST00000604367 ARHGEF40Q8TER5 1519 aa20.24■□□□□ 0.83
CCDC12-211ENST00000604367 PPP2R1AP30153 589 aa20.24■□□□□ 0.83
CCDC12-211ENST00000604367 SAFB2Q14151 953 aaKnown RBP eCLIP20.23■□□□□ 0.83
CCDC12-211ENST00000604367 CARD14Q9BXL6 1004 aa20.23■□□□□ 0.83
CCDC12-211ENST00000604367 ESF1Q9H501 851 aaKnown RBP20.22■□□□□ 0.83
CCDC12-211ENST00000604367 ZFYVE9O95405 1425 aa20.22■□□□□ 0.83
CCDC12-211ENST00000604367 NUDCQ9Y266 331 aa20.21■□□□□ 0.83
CCDC12-211ENST00000604367 SMG6Q86US8 1419 aaKnown RBP20.2■□□□□ 0.83
CCDC12-211ENST00000604367 SLC12A5Q9H2X9 1139 aa20.2■□□□□ 0.82
CCDC12-211ENST00000604367 TRHP20396 242 aaPredicted RBP20.18■□□□□ 0.82
CCDC12-211ENST00000604367 ARHGEF28Q8N1W1 1705 aaKnown RBP20.18■□□□□ 0.82
CCDC12-211ENST00000604367 NPC1L1Q9UHC9 1359 aa20.16■□□□□ 0.82
CCDC12-211ENST00000604367 SPATA31D1Q6ZQQ2 1576 aa20.16■□□□□ 0.82
CCDC12-211ENST00000604367 ZMYM3Q14202 1370 aa20.15■□□□□ 0.82
CCDC12-211ENST00000604367 ADAMTS8Q9UP79 889 aa20.15■□□□□ 0.82
CCDC12-211ENST00000604367 EVC2Q86UK5 1308 aa20.15■□□□□ 0.82
CCDC12-211ENST00000604367 CABP2Q9NPB3 220 aa20.14■□□□□ 0.82
CCDC12-211ENST00000604367 A2ML1A8K2U0 1454 aa20.13■□□□□ 0.81
CCDC12-211ENST00000604367 WDR43Q15061 677 aaKnown RBP eCLIP20.13■□□□□ 0.81
CCDC12-211ENST00000604367 NSD3Q9BZ95 1437 aa20.12■□□□□ 0.81
CCDC12-211ENST00000604367 PRAM1Q96QH2 718 aa20.12■□□□□ 0.81
CCDC12-211ENST00000604367 TULP4Q9NRJ4 1543 aa20.12■□□□□ 0.81
CCDC12-211ENST00000604367 BLMP54132 1417 aaPredicted RBP20.12■□□□□ 0.81
CCDC12-211ENST00000604367 YTHDC2Q9H6S0 1430 aaKnown RBP20.11■□□□□ 0.81
CCDC12-211ENST00000604367 POGKQ9P215 609 aa20.11■□□□□ 0.81
CCDC12-211ENST00000604367 ALKQ9UM73 1620 aa20.1■□□□□ 0.81
CCDC12-211ENST00000604367 MINK1Q8N4C8 1332 aaPredicted RBP20.1■□□□□ 0.81
CCDC12-211ENST00000604367 SRPK2P78362 688 aaKnown RBP20.1■□□□□ 0.81
CCDC12-211ENST00000604367 RIMS2Q9UQ26 1411 aa20.09■□□□□ 0.81
CCDC12-211ENST00000604367 TNNT2P45379 298 aaPredicted RBP20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms