RNA–Protein interactions for RNA: ENST00000603731.1

HERPUD2-207, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-207ENST00000603731 CHGAP10645 457 aaKnown RBP17.98■□□□□ 0.47
HERPUD2-207ENST00000603731 NBPF8Q3BBV2 869 aa17.98■□□□□ 0.47
HERPUD2-207ENST00000603731 PIK3C2BO00750 1634 aa17.98■□□□□ 0.47
HERPUD2-207ENST00000603731 ERVK-7P63135 1459 aa17.97■□□□□ 0.47
HERPUD2-207ENST00000603731 ZMYM3Q14202 1370 aa17.96■□□□□ 0.47
HERPUD2-207ENST00000603731 SLC52A1Q9NWF4 448 aa17.96■□□□□ 0.47
HERPUD2-207ENST00000603731 STAC3Q96MF2 364 aa17.95■□□□□ 0.46
HERPUD2-207ENST00000603731 ZNF142P52746 1687 aaPredicted RBP17.95■□□□□ 0.46
HERPUD2-207ENST00000603731 ADGRB3O60242 1522 aa17.94■□□□□ 0.46
HERPUD2-207ENST00000603731 TOM1O60784 492 aa17.94■□□□□ 0.46
HERPUD2-207ENST00000603731 FBXO31Q5XUX0 539 aaPredicted RBP17.94■□□□□ 0.46
HERPUD2-207ENST00000603731 MYO3AQ8NEV4 1616 aa17.93■□□□□ 0.46
HERPUD2-207ENST00000603731 IFT172Q9UG01 1749 aa17.92■□□□□ 0.46
HERPUD2-207ENST00000603731 PRAG1Q86YV5 1406 aa17.91■□□□□ 0.46
HERPUD2-207ENST00000603731 RALGAPBQ86X10 1494 aa17.91■□□□□ 0.46
HERPUD2-207ENST00000603731 IDI1Q13907 227 aa17.91■□□□□ 0.46
HERPUD2-207ENST00000603731 MYO5BQ9ULV0 1848 aa17.91■□□□□ 0.46
HERPUD2-207ENST00000603731 TRPM1Q7Z4N2 1603 aa17.9■□□□□ 0.46
HERPUD2-207ENST00000603731 CEP170BQ9Y4F5 1589 aaPredicted RBP17.9■□□□□ 0.46
HERPUD2-207ENST00000603731 ALKQ9UM73 1620 aa17.9■□□□□ 0.46
HERPUD2-207ENST00000603731 PPLO60437 1756 aa17.89■□□□□ 0.45
HERPUD2-207ENST00000603731 EIF4G2P78344 907 aaKnown RBP eCLIP17.89■□□□□ 0.45
HERPUD2-207ENST00000603731 STAG3Q9UJ98 1225 aa17.89■□□□□ 0.45
HERPUD2-207ENST00000603731 RPGRIP1LQ68CZ1 1315 aa17.89■□□□□ 0.45
HERPUD2-207ENST00000603731 CPS1P31327 1500 aa17.88■□□□□ 0.45
HERPUD2-207ENST00000603731 RGS17Q9UGC6 210 aaPredicted RBP17.88■□□□□ 0.45
HERPUD2-207ENST00000603731 TMEM131LA2VDJ0 1609 aa17.87■□□□□ 0.45
HERPUD2-207ENST00000603731 MYOM2P54296 1465 aa17.87■□□□□ 0.45
HERPUD2-207ENST00000603731 ROCK2O75116 1388 aaKnown RBP17.86■□□□□ 0.45
HERPUD2-207ENST00000603731 TNRQ92752 1358 aa17.86■□□□□ 0.45
HERPUD2-207ENST00000603731 HSPA5P11021 654 aaKnown RBP17.85■□□□□ 0.45
HERPUD2-207ENST00000603731 CARD11Q9BXL7 1154 aa17.85■□□□□ 0.45
HERPUD2-207ENST00000603731 HIRIP3Q9BW71 556 aaPredicted RBP17.84■□□□□ 0.45
HERPUD2-207ENST00000603731 SENP3Q9H4L4 574 aaPredicted RBP17.84■□□□□ 0.45
HERPUD2-207ENST00000603731 KIAA1210Q9ULL0 1709 aa17.84■□□□□ 0.45
HERPUD2-207ENST00000603731 LAMC1P11047 1609 aa17.82■□□□□ 0.44
HERPUD2-207ENST00000603731 NEXMIFQ5QGS0 1516 aa17.81■□□□□ 0.44
HERPUD2-207ENST00000603731 USP47Q96K76 1375 aa17.8■□□□□ 0.44
HERPUD2-207ENST00000603731 VGFO15240 615 aaPredicted RBP17.8■□□□□ 0.44
HERPUD2-207ENST00000603731 POLR1AO95602 1720 aaPredicted RBP17.8■□□□□ 0.44
HERPUD2-207ENST00000603731 ADGRF5Q8IZF2 1346 aa17.79■□□□□ 0.44
HERPUD2-207ENST00000603731 DIEXFQ68CQ4 756 aaKnown RBP17.79■□□□□ 0.44
HERPUD2-207ENST00000603731 KDM5AP29375 1690 aaKnown RBP17.79■□□□□ 0.44
HERPUD2-207ENST00000603731 NRXN1Q9ULB1 1477 aa17.78■□□□□ 0.44
HERPUD2-207ENST00000603731 NBPF1Q3BBV0 1214 aa17.78■□□□□ 0.44
HERPUD2-207ENST00000603731 GPRASP1Q5JY77 1395 aa17.78■□□□□ 0.44
HERPUD2-207ENST00000603731 A2ML1A8K2U0 1454 aa17.77■□□□□ 0.44
HERPUD2-207ENST00000603731 NLRP1Q9C000 1473 aa17.77■□□□□ 0.44
HERPUD2-207ENST00000603731 UBR1Q8IWV7 1749 aa17.75■□□□□ 0.43
HERPUD2-207ENST00000603731 ZFYVE9O95405 1425 aa17.75■□□□□ 0.43
HERPUD2-207ENST00000603731 NUTM2DQ5VT03 806 aaPredicted RBP17.75■□□□□ 0.43
HERPUD2-207ENST00000603731 SETD1AO15047 1707 aaKnown RBP17.75■□□□□ 0.43
HERPUD2-207ENST00000603731 HDGFP51858 240 aaKnown RBP17.74■□□□□ 0.43
HERPUD2-207ENST00000603731 CFAP70Q5T0N1 1121 aa17.74■□□□□ 0.43
HERPUD2-207ENST00000603731 POTEAQ6S8J7 498 aa17.74■□□□□ 0.43
HERPUD2-207ENST00000603731 PIK3C2GO75747 1445 aa17.73■□□□□ 0.43
HERPUD2-207ENST00000603731 RIMS2Q9UQ26 1411 aa17.73■□□□□ 0.43
HERPUD2-207ENST00000603731 IQGAP1P46940 1657 aa17.72■□□□□ 0.43
HERPUD2-207ENST00000603731 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.72■□□□□ 0.43
HERPUD2-207ENST00000603731 SETBP1Q9Y6X0 1596 aa17.71■□□□□ 0.43
HERPUD2-207ENST00000603731 C14orf93Q9H972 538 aaKnown RBP17.71■□□□□ 0.43
HERPUD2-207ENST00000603731 SCAF11Q99590 1463 aaKnown RBP17.69■□□□□ 0.42
HERPUD2-207ENST00000603731 ST20-MTHFSA0A0A6YYL1 179 aa17.69■□□□□ 0.42
HERPUD2-207ENST00000603731 EIF3AQ14152 1382 aaKnown RBP17.67■□□□□ 0.42
HERPUD2-207ENST00000603731 STRCP1A6NGW2 1772 aa17.67■□□□□ 0.42
HERPUD2-207ENST00000603731 DDX10Q13206 875 aaKnown RBP17.66■□□□□ 0.42
HERPUD2-207ENST00000603731 TMEM2Q9UHN6 1383 aa17.66■□□□□ 0.42
HERPUD2-207ENST00000603731 THEMISQ8N1K5 641 aaPredicted RBP17.65■□□□□ 0.42
HERPUD2-207ENST00000603731 LRRC7Q96NW7 1537 aa17.65■□□□□ 0.42
HERPUD2-207ENST00000603731 CCDC7Q96M83 1385 aa17.65■□□□□ 0.42
HERPUD2-207ENST00000603731 WASHC2AQ641Q2 1341 aa17.64■□□□□ 0.41
HERPUD2-207ENST00000603731 EID1Q9Y6B2 187 aa17.63■□□□□ 0.41
HERPUD2-207ENST00000603731 ADGRB1O14514 1584 aa17.62■□□□□ 0.41
HERPUD2-207ENST00000603731 TMEM132EQ6IEE7 984 aa17.62■□□□□ 0.41
HERPUD2-207ENST00000603731 BCANQ96GW7 911 aa17.62■□□□□ 0.41
HERPUD2-207ENST00000603731 POLR3GLQ9BT43 218 aa17.62■□□□□ 0.41
HERPUD2-207ENST00000603731 C11orf95C9JLR9 678 aaPredicted RBP17.61■□□□□ 0.41
HERPUD2-207ENST00000603731 KIF7Q2M1P5 1343 aa17.61■□□□□ 0.41
HERPUD2-207ENST00000603731 NPHP4O75161 1426 aaPredicted RBP17.61■□□□□ 0.41
HERPUD2-207ENST00000603731 SLIT1O75093 1534 aa17.61■□□□□ 0.41
HERPUD2-207ENST00000603731 TXNDC2Q86VQ3 553 aa17.6■□□□□ 0.41
HERPUD2-207ENST00000603731 MED14O60244 1454 aa17.59■□□□□ 0.41
HERPUD2-207ENST00000603731 SLC24A1O60721 1099 aa17.59■□□□□ 0.41
HERPUD2-207ENST00000603731 TMF1P82094 1093 aa17.59■□□□□ 0.41
HERPUD2-207ENST00000603731 ANKLE2Q86XL3 938 aa17.59■□□□□ 0.41
HERPUD2-207ENST00000603731 TRAK1Q9UPV9 953 aa17.59■□□□□ 0.41
HERPUD2-207ENST00000603731 ARHGAP23Q9P227 1491 aa17.58■□□□□ 0.41
HERPUD2-207ENST00000603731 TESK2Q96S53 571 aa17.57■□□□□ 0.4
HERPUD2-207ENST00000603731 ARHGEF28Q8N1W1 1705 aaKnown RBP17.57■□□□□ 0.4
HERPUD2-207ENST00000603731 NRXN3Q9Y4C0 1643 aa17.57■□□□□ 0.4
HERPUD2-207ENST00000603731 PLEKHG1Q9ULL1 1385 aa17.56■□□□□ 0.4
HERPUD2-207ENST00000603731 QRICH2Q9H0J4 1663 aa17.56■□□□□ 0.4
HERPUD2-207ENST00000603731 SRCAPQ6ZRS2 3230 aa17.56■□□□□ 0.4
HERPUD2-207ENST00000603731 ASXL1Q8IXJ9 1541 aa17.56■□□□□ 0.4
HERPUD2-207ENST00000603731 CENPJQ9HC77 1338 aaPredicted RBP17.55■□□□□ 0.4
HERPUD2-207ENST00000603731 LTKP29376 864 aa17.55■□□□□ 0.4
HERPUD2-207ENST00000603731 STK26Q9P289 416 aa17.55■□□□□ 0.4
HERPUD2-207ENST00000603731 YTHDC2Q9H6S0 1430 aaKnown RBP17.55■□□□□ 0.4
HERPUD2-207ENST00000603731 CDCA8Q53HL2 280 aa17.54■□□□□ 0.4
HERPUD2-207ENST00000603731 UPF1Q92900 1129 aaKnown RBP eCLIP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms