RNA–Protein interactions for RNA: ENST00000602647.5

SFXN2-207, Transcript of sideroflexin 2, humanhuman

TSL 3

Gene SFXN2, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-207ENST00000602647 ITGAEP38570 1179 aa24.51■■□□□ 1.51
SFXN2-207ENST00000602647 PROSER2Q86WR7 435 aaPredicted RBP24.51■■□□□ 1.51
SFXN2-207ENST00000602647 UNC13BO14795 1591 aa24.48■■□□□ 1.51
SFXN2-207ENST00000602647 CHGAP10645 457 aaKnown RBP24.48■■□□□ 1.51
SFXN2-207ENST00000602647 GCC2Q8IWJ2 1684 aa24.48■■□□□ 1.51
SFXN2-207ENST00000602647 NKTRP30414 1462 aaKnown RBP24.47■■□□□ 1.51
SFXN2-207ENST00000602647 HDGFP51858 240 aaKnown RBP24.47■■□□□ 1.51
SFXN2-207ENST00000602647 RIMS2Q9UQ26 1411 aa24.46■■□□□ 1.51
SFXN2-207ENST00000602647 RBM33Q96EV2 1170 aaKnown RBP24.46■■□□□ 1.51
SFXN2-207ENST00000602647 ROCK1Q13464 1354 aa24.45■■□□□ 1.5
SFXN2-207ENST00000602647 NWD1Q149M9 1564 aa24.45■■□□□ 1.5
SFXN2-207ENST00000602647 ZFYVE9O95405 1425 aa24.44■■□□□ 1.5
SFXN2-207ENST00000602647 FAM135BQ49AJ0 1406 aa24.44■■□□□ 1.5
SFXN2-207ENST00000602647 PLEKHG1Q9ULL1 1385 aa24.44■■□□□ 1.5
SFXN2-207ENST00000602647 MYO5BQ9ULV0 1848 aa24.43■■□□□ 1.5
SFXN2-207ENST00000602647 MSH6P52701 1360 aa24.42■■□□□ 1.5
SFXN2-207ENST00000602647 TMEM131LA2VDJ0 1609 aa24.41■■□□□ 1.5
SFXN2-207ENST00000602647 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.4■■□□□ 1.5
SFXN2-207ENST00000602647 E9PCH4 1651 aa24.4■■□□□ 1.5
SFXN2-207ENST00000602647 IQGAP3Q86VI3 1631 aa24.39■■□□□ 1.5
SFXN2-207ENST00000602647 ROBO1Q9Y6N7 1651 aa24.39■■□□□ 1.49
SFXN2-207ENST00000602647 NUP155O75694 1391 aa24.39■■□□□ 1.49
SFXN2-207ENST00000602647 NUTM2DQ5VT03 806 aaPredicted RBP24.35■■□□□ 1.49
SFXN2-207ENST00000602647 C14orf37Q86TY3 774 aa24.34■■□□□ 1.49
SFXN2-207ENST00000602647 TBX22Q9Y458 520 aa24.33■■□□□ 1.49
SFXN2-207ENST00000602647 CHD2O14647 1828 aaKnown RBP24.33■■□□□ 1.48
SFXN2-207ENST00000602647 DIP2AQ14689 1571 aa24.3■■□□□ 1.48
SFXN2-207ENST00000602647 SLAIN2Q9P270 581 aa24.3■■□□□ 1.48
SFXN2-207ENST00000602647 ADAMTS13Q76LX8 1427 aa24.27■■□□□ 1.48
SFXN2-207ENST00000602647 PHLPP1O60346 1717 aa24.26■■□□□ 1.47
SFXN2-207ENST00000602647 RGS17Q9UGC6 210 aaPredicted RBP24.25■■□□□ 1.47
SFXN2-207ENST00000602647 PIK3R4Q99570 1358 aa24.25■■□□□ 1.47
SFXN2-207ENST00000602647 NCOA3Q9Y6Q9 1424 aa24.25■■□□□ 1.47
SFXN2-207ENST00000602647 TRPM2O94759 1503 aa24.25■■□□□ 1.47
SFXN2-207ENST00000602647 ZNF326Q5BKZ1 582 aaKnown RBP24.23■■□□□ 1.47
SFXN2-207ENST00000602647 HFM1A2PYH4 1435 aa24.22■■□□□ 1.47
SFXN2-207ENST00000602647 NAIPQ13075 1403 aa24.22■■□□□ 1.47
SFXN2-207ENST00000602647 ATF3P18847 181 aa24.22■■□□□ 1.47
SFXN2-207ENST00000602647 SPHKAPQ2M3C7 1700 aa24.21■■□□□ 1.47
SFXN2-207ENST00000602647 JCADQ9P266 1359 aa24.21■■□□□ 1.47
SFXN2-207ENST00000602647 CADPS2Q86UW7 1296 aa24.21■■□□□ 1.47
SFXN2-207ENST00000602647 C19orf44Q9H6X5 657 aa24.19■■□□□ 1.46
SFXN2-207ENST00000602647 AMOTL2Q9Y2J4 779 aa24.19■■□□□ 1.46
SFXN2-207ENST00000602647 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.16■■□□□ 1.46
SFXN2-207ENST00000602647 POTEAQ6S8J7 498 aa24.15■■□□□ 1.46
SFXN2-207ENST00000602647 PTPRUQ92729 1446 aa24.15■■□□□ 1.46
SFXN2-207ENST00000602647 COL16A1Q07092 1604 aaPredicted RBP24.14■■□□□ 1.46
SFXN2-207ENST00000602647 SETBP1Q9Y6X0 1596 aa24.13■■□□□ 1.45
SFXN2-207ENST00000602647 MEX3CQ5U5Q3 659 aaKnown RBP24.11■■□□□ 1.45
SFXN2-207ENST00000602647 NRXN3Q9Y4C0 1643 aa24.1■■□□□ 1.45
SFXN2-207ENST00000602647 TRIM26Q12899 539 aaPredicted RBP24.1■■□□□ 1.45
SFXN2-207ENST00000602647 CLTCL1P53675 1640 aa24.1■■□□□ 1.45
SFXN2-207ENST00000602647 AHDC1Q5TGY3 1603 aaPredicted RBP24.1■■□□□ 1.45
SFXN2-207ENST00000602647 SETD5Q9C0A6 1442 aa24.1■■□□□ 1.45
SFXN2-207ENST00000602647 XRN1Q8IZH2 1706 aaKnown RBP24.09■■□□□ 1.45
SFXN2-207ENST00000602647 DCCP43146 1447 aa24.09■■□□□ 1.45
SFXN2-207ENST00000602647 SPATA31A6Q5VVP1 1343 aa24.08■■□□□ 1.44
SFXN2-207ENST00000602647 TRIM52Q96A61 297 aa24.07■■□□□ 1.44
SFXN2-207ENST00000602647 METP08581 1390 aa24.06■■□□□ 1.44
SFXN2-207ENST00000602647 BRINP3Q76B58 766 aa24.06■■□□□ 1.44
SFXN2-207ENST00000602647 NEXMIFQ5QGS0 1516 aa24.05■■□□□ 1.44
SFXN2-207ENST00000602647 KIF1BO60333 1816 aa24.04■■□□□ 1.44
SFXN2-207ENST00000602647 LRP6O75581 1613 aa24.03■■□□□ 1.44
SFXN2-207ENST00000602647 SHPRHQ149N8 1683 aa24.02■■□□□ 1.44
SFXN2-207ENST00000602647 ASXL1Q8IXJ9 1541 aa24.01■■□□□ 1.43
SFXN2-207ENST00000602647 ACIN1Q9UKV3 1341 aaKnown RBP24■■□□□ 1.43
SFXN2-207ENST00000602647 RAB3GAP2Q9H2M9 1393 aa24■■□□□ 1.43
SFXN2-207ENST00000602647 MST1RQ04912 1400 aa24■■□□□ 1.43
SFXN2-207ENST00000602647 ADGRL3Q9HAR2 1447 aa24■■□□□ 1.43
SFXN2-207ENST00000602647 SLC4A1APQ9BWU0 796 aaKnown RBP23.99■■□□□ 1.43
SFXN2-207ENST00000602647 NUTM2BA6NNL0 878 aaPredicted RBP23.98■■□□□ 1.43
SFXN2-207ENST00000602647 NUTM2EB1AL46 878 aaPredicted RBP23.98■■□□□ 1.43
SFXN2-207ENST00000602647 ZNF772Q68DY9 489 aaPredicted RBP23.98■■□□□ 1.43
SFXN2-207ENST00000602647 NUTM2AQ8IVF1 878 aaPredicted RBP23.98■■□□□ 1.43
SFXN2-207ENST00000602647 SETD1AO15047 1707 aaKnown RBP23.97■■□□□ 1.43
SFXN2-207ENST00000602647 VGFO15240 615 aaPredicted RBP23.97■■□□□ 1.43
SFXN2-207ENST00000602647 NALCNQ8IZF0 1738 aa23.94■■□□□ 1.42
SFXN2-207ENST00000602647 HRCP23327 699 aa23.94■■□□□ 1.42
SFXN2-207ENST00000602647 NHSL1Q5SYE7 1610 aa23.93■■□□□ 1.42
SFXN2-207ENST00000602647 PTCH1Q13635 1447 aa23.92■■□□□ 1.42
SFXN2-207ENST00000602647 RPGRIP1LQ68CZ1 1315 aa23.91■■□□□ 1.42
SFXN2-207ENST00000602647 LRRC59Q96AG4 307 aaKnown RBP23.91■■□□□ 1.42
SFXN2-207ENST00000602647 DDX17Q92841 729 aaKnown RBP23.89■■□□□ 1.41
SFXN2-207ENST00000602647 ROBO2Q9HCK4 1378 aa23.87■■□□□ 1.41
SFXN2-207ENST00000602647 C1orf167Q5SNV9 1468 aa23.87■■□□□ 1.41
SFXN2-207ENST00000602647 MPHOSPH9Q99550 1183 aa23.86■■□□□ 1.41
SFXN2-207ENST00000602647 AFF2P51816 1311 aa23.85■■□□□ 1.41
SFXN2-207ENST00000602647 RXRBP28702 533 aa23.85■■□□□ 1.41
SFXN2-207ENST00000602647 FOXD1Q16676 465 aa23.85■■□□□ 1.41
SFXN2-207ENST00000602647 PPLO60437 1756 aa23.84■■□□□ 1.41
SFXN2-207ENST00000602647 PNPLA6Q8IY17 1366 aa23.84■■□□□ 1.41
SFXN2-207ENST00000602647 CCDC144AA2RUR9 1427 aa23.84■■□□□ 1.41
SFXN2-207ENST00000602647 C8orf37Q96NL8 207 aa23.83■■□□□ 1.41
SFXN2-207ENST00000602647 PRAG1Q86YV5 1406 aa23.8■■□□□ 1.4
SFXN2-207ENST00000602647 PCGF6Q9BYE7 350 aa23.8■■□□□ 1.4
SFXN2-207ENST00000602647 RGL3Q3MIN7 710 aa23.79■■□□□ 1.4
SFXN2-207ENST00000602647 ORAI2Q96SN7 254 aa23.79■■□□□ 1.4
SFXN2-207ENST00000602647 ADAMTS2O95450 1211 aa23.77■■□□□ 1.4
SFXN2-207ENST00000602647 CDK12Q9NYV4 1490 aaPredicted RBP23.75■■□□□ 1.39
SFXN2-207ENST00000602647 ADGRF5Q8IZF2 1346 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms