RNA–Protein interactions for RNA: ENST00000602086.5

ZNF548-212, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-212ENST00000602086 EIF4G2P78344 907 aaKnown RBP eCLIP20.36■□□□□ 0.85
ZNF548-212ENST00000602086 KDM2AQ9Y2K7 1162 aa20.36■□□□□ 0.85
ZNF548-212ENST00000602086 PPLO60437 1756 aa20.36■□□□□ 0.85
ZNF548-212ENST00000602086 NRXN1Q9ULB1 1477 aa20.36■□□□□ 0.85
ZNF548-212ENST00000602086 TMEM131LA2VDJ0 1609 aa20.35■□□□□ 0.85
ZNF548-212ENST00000602086 IDI1Q13907 227 aa20.35■□□□□ 0.85
ZNF548-212ENST00000602086 KDM5AP29375 1690 aaKnown RBP20.35■□□□□ 0.85
ZNF548-212ENST00000602086 FBXO31Q5XUX0 539 aaPredicted RBP20.33■□□□□ 0.85
ZNF548-212ENST00000602086 ZFYVE9O95405 1425 aa20.32■□□□□ 0.84
ZNF548-212ENST00000602086 MYO3AQ8NEV4 1616 aa20.31■□□□□ 0.84
ZNF548-212ENST00000602086 LTBP4Q8N2S1 1624 aa20.31■□□□□ 0.84
ZNF548-212ENST00000602086 ZNF326Q5BKZ1 582 aaKnown RBP20.3■□□□□ 0.84
ZNF548-212ENST00000602086 DMRT2Q9Y5R5 561 aa20.3■□□□□ 0.84
ZNF548-212ENST00000602086 NEXMIFQ5QGS0 1516 aa20.3■□□□□ 0.84
ZNF548-212ENST00000602086 ROCK2O75116 1388 aaKnown RBP20.29■□□□□ 0.84
ZNF548-212ENST00000602086 TNRQ92752 1358 aa20.29■□□□□ 0.84
ZNF548-212ENST00000602086 DISP3Q9P2K9 1392 aa20.29■□□□□ 0.84
ZNF548-212ENST00000602086 HSPA5P11021 654 aaKnown RBP20.28■□□□□ 0.84
ZNF548-212ENST00000602086 ZNF142P52746 1687 aaPredicted RBP20.28■□□□□ 0.84
ZNF548-212ENST00000602086 MYO5BQ9ULV0 1848 aa20.27■□□□□ 0.84
ZNF548-212ENST00000602086 NLRP1Q9C000 1473 aa20.27■□□□□ 0.84
ZNF548-212ENST00000602086 USP47Q96K76 1375 aa20.26■□□□□ 0.83
ZNF548-212ENST00000602086 CHGAP10645 457 aaKnown RBP20.26■□□□□ 0.83
ZNF548-212ENST00000602086 CARD11Q9BXL7 1154 aa20.26■□□□□ 0.83
ZNF548-212ENST00000602086 A2ML1A8K2U0 1454 aa20.25■□□□□ 0.83
ZNF548-212ENST00000602086 VGFO15240 615 aaPredicted RBP20.25■□□□□ 0.83
ZNF548-212ENST00000602086 PIK3C2GO75747 1445 aa20.25■□□□□ 0.83
ZNF548-212ENST00000602086 ILDR2Q71H61 639 aa20.24■□□□□ 0.83
ZNF548-212ENST00000602086 SETBP1Q9Y6X0 1596 aa20.24■□□□□ 0.83
ZNF548-212ENST00000602086 POLR1AO95602 1720 aaPredicted RBP20.24■□□□□ 0.83
ZNF548-212ENST00000602086 DIEXFQ68CQ4 756 aaKnown RBP20.23■□□□□ 0.83
ZNF548-212ENST00000602086 ADGRF5Q8IZF2 1346 aa20.23■□□□□ 0.83
ZNF548-212ENST00000602086 CEP170BQ9Y4F5 1589 aaPredicted RBP20.21■□□□□ 0.83
ZNF548-212ENST00000602086 IQGAP1P46940 1657 aa20.21■□□□□ 0.83
ZNF548-212ENST00000602086 NBPF1Q3BBV0 1214 aa20.2■□□□□ 0.82
ZNF548-212ENST00000602086 UBR1Q8IWV7 1749 aa20.19■□□□□ 0.82
ZNF548-212ENST00000602086 C14orf93Q9H972 538 aaKnown RBP20.19■□□□□ 0.82
ZNF548-212ENST00000602086 STAG3Q9UJ98 1225 aa20.18■□□□□ 0.82
ZNF548-212ENST00000602086 NCKAP5LQ9HCH0 1330 aa20.18■□□□□ 0.82
ZNF548-212ENST00000602086 SCAF11Q99590 1463 aaKnown RBP20.17■□□□□ 0.82
ZNF548-212ENST00000602086 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.16■□□□□ 0.82
ZNF548-212ENST00000602086 HDGFP51858 240 aaKnown RBP20.15■□□□□ 0.82
ZNF548-212ENST00000602086 HIRIP3Q9BW71 556 aaPredicted RBP20.15■□□□□ 0.82
ZNF548-212ENST00000602086 ZNF335Q9H4Z2 1342 aaPredicted RBP20.15■□□□□ 0.82
ZNF548-212ENST00000602086 IQSEC2Q5JU85 1478 aa20.15■□□□□ 0.82
ZNF548-212ENST00000602086 RIMS2Q9UQ26 1411 aa20.14■□□□□ 0.81
ZNF548-212ENST00000602086 ADGRB1O14514 1584 aa20.13■□□□□ 0.81
ZNF548-212ENST00000602086 CFAP70Q5T0N1 1121 aa20.13■□□□□ 0.81
ZNF548-212ENST00000602086 EIF3AQ14152 1382 aaKnown RBP20.12■□□□□ 0.81
ZNF548-212ENST00000602086 CCDC7Q96M83 1385 aa20.11■□□□□ 0.81
ZNF548-212ENST00000602086 ST20-MTHFSA0A0A6YYL1 179 aa20.11■□□□□ 0.81
ZNF548-212ENST00000602086 SLC24A1O60721 1099 aa20.11■□□□□ 0.81
ZNF548-212ENST00000602086 TMEM2Q9UHN6 1383 aa20.1■□□□□ 0.81
ZNF548-212ENST00000602086 WASHC2AQ641Q2 1341 aa20.1■□□□□ 0.81
ZNF548-212ENST00000602086 SLIT1O75093 1534 aa20.1■□□□□ 0.81
ZNF548-212ENST00000602086 ARHGAP23Q9P227 1491 aa20.09■□□□□ 0.81
ZNF548-212ENST00000602086 ALKQ9UM73 1620 aa20.06■□□□□ 0.8
ZNF548-212ENST00000602086 SBNO2Q9Y2G9 1366 aa20.06■□□□□ 0.8
ZNF548-212ENST00000602086 KIF7Q2M1P5 1343 aa20.05■□□□□ 0.8
ZNF548-212ENST00000602086 C11orf95C9JLR9 678 aaPredicted RBP20.05■□□□□ 0.8
ZNF548-212ENST00000602086 SOCS7O14512 581 aa20.05■□□□□ 0.8
ZNF548-212ENST00000602086 THEMISQ8N1K5 641 aaPredicted RBP20.05■□□□□ 0.8
ZNF548-212ENST00000602086 TESK2Q96S53 571 aa20.05■□□□□ 0.8
ZNF548-212ENST00000602086 SETD1AO15047 1707 aaKnown RBP20.05■□□□□ 0.8
ZNF548-212ENST00000602086 NRXN3Q9Y4C0 1643 aa20.03■□□□□ 0.8
ZNF548-212ENST00000602086 UBAP1LF5GYI3 381 aa20.03■□□□□ 0.8
ZNF548-212ENST00000602086 DDX10Q13206 875 aaKnown RBP20.03■□□□□ 0.8
ZNF548-212ENST00000602086 ASXL1Q8IXJ9 1541 aa20.02■□□□□ 0.8
ZNF548-212ENST00000602086 PLEKHG1Q9ULL1 1385 aa20.01■□□□□ 0.79
ZNF548-212ENST00000602086 NUTM2DQ5VT03 806 aaPredicted RBP20.01■□□□□ 0.79
ZNF548-212ENST00000602086 TMF1P82094 1093 aa20■□□□□ 0.79
ZNF548-212ENST00000602086 ARHGEF28Q8N1W1 1705 aaKnown RBP19.99■□□□□ 0.79
ZNF548-212ENST00000602086 CDCA8Q53HL2 280 aa19.98■□□□□ 0.79
ZNF548-212ENST00000602086 EID1Q9Y6B2 187 aa19.98■□□□□ 0.79
ZNF548-212ENST00000602086 DLC1Q96QB1 1528 aa19.97■□□□□ 0.79
ZNF548-212ENST00000602086 YTHDC2Q9H6S0 1430 aaKnown RBP19.97■□□□□ 0.79
ZNF548-212ENST00000602086 MED14O60244 1454 aa19.96■□□□□ 0.79
ZNF548-212ENST00000602086 CENPJQ9HC77 1338 aaPredicted RBP19.96■□□□□ 0.79
ZNF548-212ENST00000602086 TMEM132EQ6IEE7 984 aa19.95■□□□□ 0.78
ZNF548-212ENST00000602086 SCAF1Q9H7N4 1312 aaKnown RBP19.95■□□□□ 0.78
ZNF548-212ENST00000602086 DIP2AQ14689 1571 aa19.95■□□□□ 0.78
ZNF548-212ENST00000602086 LRPPRCP42704 1394 aaKnown RBP19.95■□□□□ 0.78
ZNF548-212ENST00000602086 TXNDC2Q86VQ3 553 aa19.94■□□□□ 0.78
ZNF548-212ENST00000602086 ABCC11Q96J66 1382 aa19.94■□□□□ 0.78
ZNF548-212ENST00000602086 QRICH2Q9H0J4 1663 aa19.94■□□□□ 0.78
ZNF548-212ENST00000602086 KNDC1Q76NI1 1749 aa19.93■□□□□ 0.78
ZNF548-212ENST00000602086 LTKP29376 864 aa19.93■□□□□ 0.78
ZNF548-212ENST00000602086 SIRT1Q96EB6 747 aa19.93■□□□□ 0.78
ZNF548-212ENST00000602086 ADAMTS13Q76LX8 1427 aa19.93■□□□□ 0.78
ZNF548-212ENST00000602086 PUS7Q96PZ0 661 aaKnown RBP19.92■□□□□ 0.78
ZNF548-212ENST00000602086 TRAK1Q9UPV9 953 aa19.92■□□□□ 0.78
ZNF548-212ENST00000602086 TECPR2O15040 1411 aa19.92■□□□□ 0.78
ZNF548-212ENST00000602086 MED1Q15648 1581 aaPredicted RBP19.91■□□□□ 0.78
ZNF548-212ENST00000602086 STRCP1A6NGW2 1772 aa19.91■□□□□ 0.78
ZNF548-212ENST00000602086 CPS1P31327 1500 aa19.91■□□□□ 0.78
ZNF548-212ENST00000602086 PIP4K2BP78356 416 aa19.9■□□□□ 0.78
ZNF548-212ENST00000602086 MIER1Q8N108 512 aa19.9■□□□□ 0.78
ZNF548-212ENST00000602086 TBX22Q9Y458 520 aa19.89■□□□□ 0.77
ZNF548-212ENST00000602086 FAM135BQ49AJ0 1406 aa19.87■□□□□ 0.77
ZNF548-212ENST00000602086 METP08581 1390 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms