RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 ABTB2Q8N961 1025 aa14.08□□□□□ -0.16
ZNF558-207ENST00000601372 USP35Q9P2H5 1018 aa14.08□□□□□ -0.16
ZNF558-207ENST00000601372 CHD1O14646 1710 aa14.07□□□□□ -0.16
ZNF558-207ENST00000601372 IPO9Q96P70 1041 aaKnown RBP14.07□□□□□ -0.16
ZNF558-207ENST00000601372 NLRP13Q86W25 1043 aa14.07□□□□□ -0.16
ZNF558-207ENST00000601372 STRN4Q9NRL3 753 aa14.06□□□□□ -0.16
ZNF558-207ENST00000601372 TCERG1O14776 1098 aaKnown RBP14.05□□□□□ -0.16
ZNF558-207ENST00000601372 NLRP6P59044 892 aa14.05□□□□□ -0.16
ZNF558-207ENST00000601372 STAC3Q96MF2 364 aa14.05□□□□□ -0.16
ZNF558-207ENST00000601372 UGGT2Q9NYU1 1516 aa14.05□□□□□ -0.16
ZNF558-207ENST00000601372 CEP170Q5SW79 1584 aa14.05□□□□□ -0.16
ZNF558-207ENST00000601372 ABCA5Q8WWZ7 1642 aa14.05□□□□□ -0.16
ZNF558-207ENST00000601372 TSPOAP1O95153 1857 aa14.04□□□□□ -0.16
ZNF558-207ENST00000601372 ITSN2Q9NZM3 1697 aa14.04□□□□□ -0.16
ZNF558-207ENST00000601372 RRP1P56182 461 aaKnown RBP14.04□□□□□ -0.16
ZNF558-207ENST00000601372 RRP7AQ9Y3A4 280 aaKnown RBP14.04□□□□□ -0.16
ZNF558-207ENST00000601372 DMRT2Q9Y5R5 561 aa14.04□□□□□ -0.16
ZNF558-207ENST00000601372 KIAA1107Q9UPP5 1409 aa14.03□□□□□ -0.16
ZNF558-207ENST00000601372 CHMP3Q9Y3E7 222 aa14.03□□□□□ -0.16
ZNF558-207ENST00000601372 NLRP2Q9NX02 1062 aa14.03□□□□□ -0.16
ZNF558-207ENST00000601372 GTF2E1P29083 439 aaPredicted RBP14.03□□□□□ -0.16
ZNF558-207ENST00000601372 XPCQ01831 940 aaPredicted RBP14.03□□□□□ -0.16
ZNF558-207ENST00000601372 CRBNQ96SW2 442 aa14.03□□□□□ -0.16
ZNF558-207ENST00000601372 MS4A1P11836 297 aa14.02□□□□□ -0.16
ZNF558-207ENST00000601372 KLHL34Q8N239 644 aa14.02□□□□□ -0.16
ZNF558-207ENST00000601372 RBM33Q96EV2 1170 aaKnown RBP14.02□□□□□ -0.16
ZNF558-207ENST00000601372 HFM1A2PYH4 1435 aa14.02□□□□□ -0.16
ZNF558-207ENST00000601372 STK31Q9BXU1 1019 aa14.02□□□□□ -0.17
ZNF558-207ENST00000601372 CCDC184Q52MB2 194 aa14.02□□□□□ -0.17
ZNF558-207ENST00000601372 CDK19Q9BWU1 502 aa14.02□□□□□ -0.17
ZNF558-207ENST00000601372 CHMP4BQ9H444 224 aaKnown RBP14.02□□□□□ -0.17
ZNF558-207ENST00000601372 HSP90AB1P08238 724 aaKnown RBP14.02□□□□□ -0.17
ZNF558-207ENST00000601372 SLC4A3P48751 1232 aa14.01□□□□□ -0.17
ZNF558-207ENST00000601372 ABCC2Q92887 1545 aa14.01□□□□□ -0.17
ZNF558-207ENST00000601372 G3V3G9 751 aa14.01□□□□□ -0.17
ZNF558-207ENST00000601372 LMOD3Q0VAK6 560 aa14.01□□□□□ -0.17
ZNF558-207ENST00000601372 DCAF8Q5TAQ9 597 aa14.01□□□□□ -0.17
ZNF558-207ENST00000601372 PPP6R1Q9UPN7 881 aa14.01□□□□□ -0.17
ZNF558-207ENST00000601372 PLCH2O75038 1416 aa14.01□□□□□ -0.17
ZNF558-207ENST00000601372 TARBP1Q13395 1621 aaKnown RBP14□□□□□ -0.17
ZNF558-207ENST00000601372 NUP160Q12769 1436 aa14□□□□□ -0.17
ZNF558-207ENST00000601372 CLUAP1Q96AJ1 413 aa14□□□□□ -0.17
ZNF558-207ENST00000601372 ABCC5O15440 1437 aa14□□□□□ -0.17
ZNF558-207ENST00000601372 CASC1Q6TDU7 716 aa14□□□□□ -0.17
ZNF558-207ENST00000601372 NUP153P49790 1475 aaKnown RBP14□□□□□ -0.17
ZNF558-207ENST00000601372 TTC5Q8N0Z6 440 aa14□□□□□ -0.17
ZNF558-207ENST00000601372 ITPRIPQ8IWB1 547 aa14□□□□□ -0.17
ZNF558-207ENST00000601372 NBPF8Q3BBV2 869 aa14□□□□□ -0.17
ZNF558-207ENST00000601372 RAPGEF4Q8WZA2 1011 aa14□□□□□ -0.17
ZNF558-207ENST00000601372 TRIM44Q96DX7 344 aaPredicted RBP14□□□□□ -0.17
ZNF558-207ENST00000601372 SLKQ9H2G2 1235 aaPredicted RBP13.99□□□□□ -0.17
ZNF558-207ENST00000601372 GGNBP2Q9H3C7 697 aa13.99□□□□□ -0.17
ZNF558-207ENST00000601372 TEFQ10587 303 aa13.99□□□□□ -0.17
ZNF558-207ENST00000601372 TAF7LQ5H9L4 462 aa13.99□□□□□ -0.17
ZNF558-207ENST00000601372 SYCP2Q9BX26 1530 aa13.99□□□□□ -0.17
ZNF558-207ENST00000601372 NGEFQ8N5V2 710 aa13.98□□□□□ -0.17
ZNF558-207ENST00000601372 SF3B2Q13435 895 aaKnown RBP13.98□□□□□ -0.17
ZNF558-207ENST00000601372 ZNF518AQ6AHZ1 1483 aa13.98□□□□□ -0.17
ZNF558-207ENST00000601372 RPGRIP1LQ68CZ1 1315 aa13.98□□□□□ -0.17
ZNF558-207ENST00000601372 APBB1O00213 710 aa13.97□□□□□ -0.17
ZNF558-207ENST00000601372 TAOK2Q9UL54 1235 aa13.97□□□□□ -0.17
ZNF558-207ENST00000601372 RTEL1-TNFRSF6BF6WH68 1400 aa13.97□□□□□ -0.17
ZNF558-207ENST00000601372 GOLGA6L22H0YM25 854 aa13.96□□□□□ -0.17
ZNF558-207ENST00000601372 PDE4AP27815 886 aa13.96□□□□□ -0.17
ZNF558-207ENST00000601372 DIAPH1O60610 1272 aaKnown RBP13.96□□□□□ -0.17
ZNF558-207ENST00000601372 GPATCH8Q9UKJ3 1502 aaKnown RBP13.96□□□□□ -0.17
ZNF558-207ENST00000601372 TNRQ92752 1358 aa13.96□□□□□ -0.17
ZNF558-207ENST00000601372 FAM135AQ9P2D6 1515 aa13.96□□□□□ -0.18
ZNF558-207ENST00000601372 PDE3BQ13370 1112 aa13.96□□□□□ -0.18
ZNF558-207ENST00000601372 BCL2L13Q9BXK5 485 aa13.96□□□□□ -0.18
ZNF558-207ENST00000601372 CHMP4AQ9BY43 222 aa13.96□□□□□ -0.18
ZNF558-207ENST00000601372 NBPF1Q3BBV0 1214 aa13.96□□□□□ -0.18
ZNF558-207ENST00000601372 SLC4A10Q6U841 1118 aa13.96□□□□□ -0.18
ZNF558-207ENST00000601372 HSCBQ8IWL3 235 aa13.95□□□□□ -0.18
ZNF558-207ENST00000601372 ROCK1Q13464 1354 aa13.95□□□□□ -0.18
ZNF558-207ENST00000601372 IPO8O15397 1037 aaKnown RBP13.94□□□□□ -0.18
ZNF558-207ENST00000601372 DHX29Q7Z478 1369 aaKnown RBP13.94□□□□□ -0.18
ZNF558-207ENST00000601372 GZF1Q9H116 711 aaPredicted RBP13.94□□□□□ -0.18
ZNF558-207ENST00000601372 HMOX1P09601 288 aa13.93□□□□□ -0.18
ZNF558-207ENST00000601372 MFAP1P55081 439 aaKnown RBP13.93□□□□□ -0.18
ZNF558-207ENST00000601372 WAPLQ7Z5K2 1190 aa13.93□□□□□ -0.18
ZNF558-207ENST00000601372 KDM5BQ9UGL1 1544 aa13.93□□□□□ -0.18
ZNF558-207ENST00000601372 FANCIQ9NVI1 1328 aa13.93□□□□□ -0.18
ZNF558-207ENST00000601372 IDI1Q13907 227 aa13.93□□□□□ -0.18
ZNF558-207ENST00000601372 TOM1L2Q6ZVM7 507 aa13.93□□□□□ -0.18
ZNF558-207ENST00000601372 CABP1Q9NZU7 370 aa13.93□□□□□ -0.18
ZNF558-207ENST00000601372 A2MP01023 1474 aa13.93□□□□□ -0.18
ZNF558-207ENST00000601372 HSPA2P54652 639 aa13.93□□□□□ -0.18
ZNF558-207ENST00000601372 SMC4Q9NTJ3 1288 aa13.92□□□□□ -0.18
ZNF558-207ENST00000601372 AMOTL2Q9Y2J4 779 aa13.92□□□□□ -0.18
ZNF558-207ENST00000601372 EIF2S2P20042 333 aaKnown RBP13.92□□□□□ -0.18
ZNF558-207ENST00000601372 NAP1L5Q96NT1 182 aaPredicted RBP13.91□□□□□ -0.18
ZNF558-207ENST00000601372 ANKRD30BQ9BXX2 1392 aa13.91□□□□□ -0.18
ZNF558-207ENST00000601372 SMG6Q86US8 1419 aaKnown RBP13.91□□□□□ -0.18
ZNF558-207ENST00000601372 ADAMTS2O95450 1211 aa13.91□□□□□ -0.18
ZNF558-207ENST00000601372 NECTIN2Q92692 538 aa13.91□□□□□ -0.18
ZNF558-207ENST00000601372 CDCA7LQ96GN5 454 aa13.9□□□□□ -0.18
ZNF558-207ENST00000601372 RWDD1Q9H446 243 aaPredicted RBP13.9□□□□□ -0.18
ZNF558-207ENST00000601372 ISY1Q9ULR0 285 aaKnown RBP13.9□□□□□ -0.18
ZNF558-207ENST00000601372 DISP1Q96F81 1524 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms