RNA–Protein interactions for RNA: ENST00000600078.5

RAB4B-206, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 5

Gene RAB4B, Length 715 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-206ENST00000600078 NWD1Q149M9 1564 aa28.62■■■□□ 2.17
RAB4B-206ENST00000600078 TET3O43151 1660 aa28.61■■■□□ 2.17
RAB4B-206ENST00000600078 KCNA6P17658 529 aa28.61■■■□□ 2.17
RAB4B-206ENST00000600078 NKTRP30414 1462 aaKnown RBP28.6■■■□□ 2.17
RAB4B-206ENST00000600078 EFCAB6Q5THR3 1501 aa28.6■■■□□ 2.17
RAB4B-206ENST00000600078 NUP155O75694 1391 aa28.59■■■□□ 2.17
RAB4B-206ENST00000600078 PROSER2Q86WR7 435 aaPredicted RBP28.58■■■□□ 2.17
RAB4B-206ENST00000600078 RBM33Q96EV2 1170 aaKnown RBP28.58■■■□□ 2.17
RAB4B-206ENST00000600078 JCADQ9P266 1359 aa28.58■■■□□ 2.17
RAB4B-206ENST00000600078 COL16A1Q07092 1604 aaPredicted RBP28.55■■■□□ 2.16
RAB4B-206ENST00000600078 IQGAP3Q86VI3 1631 aa28.54■■■□□ 2.16
RAB4B-206ENST00000600078 MSH6P52701 1360 aa28.53■■■□□ 2.16
RAB4B-206ENST00000600078 SLC26A8Q96RN1 970 aa28.53■■■□□ 2.16
RAB4B-206ENST00000600078 STAG3Q9UJ98 1225 aa28.52■■■□□ 2.16
RAB4B-206ENST00000600078 SETD5Q9C0A6 1442 aa28.52■■■□□ 2.16
RAB4B-206ENST00000600078 LRP6O75581 1613 aa28.51■■■□□ 2.15
RAB4B-206ENST00000600078 UPF1Q92900 1129 aaKnown RBP eCLIP28.51■■■□□ 2.15
RAB4B-206ENST00000600078 TRIM52Q96A61 297 aa28.51■■■□□ 2.15
RAB4B-206ENST00000600078 SLAIN2Q9P270 581 aa28.48■■■□□ 2.15
RAB4B-206ENST00000600078 ADGRB3O60242 1522 aa28.47■■■□□ 2.15
RAB4B-206ENST00000600078 RPRD2Q5VT52 1461 aaKnown RBP28.46■■■□□ 2.15
RAB4B-206ENST00000600078 IDI1Q13907 227 aa28.45■■■□□ 2.14
RAB4B-206ENST00000600078 ACIN1Q9UKV3 1341 aaKnown RBP28.43■■■□□ 2.14
RAB4B-206ENST00000600078 CHD2O14647 1828 aaKnown RBP28.43■■■□□ 2.14
RAB4B-206ENST00000600078 SPATA31A6Q5VVP1 1343 aa28.42■■■□□ 2.14
RAB4B-206ENST00000600078 E9PCH4 1651 aa28.42■■■□□ 2.14
RAB4B-206ENST00000600078 SHPRHQ149N8 1683 aa28.42■■■□□ 2.14
RAB4B-206ENST00000600078 RAB3GAP2Q9H2M9 1393 aa28.41■■■□□ 2.14
RAB4B-206ENST00000600078 ZNF772Q68DY9 489 aaPredicted RBP28.4■■■□□ 2.14
RAB4B-206ENST00000600078 NOS1P29475 1434 aa28.4■■■□□ 2.14
RAB4B-206ENST00000600078 MEX3CQ5U5Q3 659 aaKnown RBP28.38■■■□□ 2.13
RAB4B-206ENST00000600078 AHDC1Q5TGY3 1603 aaPredicted RBP28.37■■■□□ 2.13
RAB4B-206ENST00000600078 TRIM26Q12899 539 aaPredicted RBP28.37■■■□□ 2.13
RAB4B-206ENST00000600078 SLC4A1APQ9BWU0 796 aaKnown RBP28.37■■■□□ 2.13
RAB4B-206ENST00000600078 MYO5BQ9ULV0 1848 aa28.34■■■□□ 2.13
RAB4B-206ENST00000600078 HRCP23327 699 aa28.33■■■□□ 2.13
RAB4B-206ENST00000600078 BCANQ96GW7 911 aa28.33■■■□□ 2.13
RAB4B-206ENST00000600078 SLC52A1Q9NWF4 448 aa28.32■■■□□ 2.12
RAB4B-206ENST00000600078 ZFYVE9O95405 1425 aa28.32■■■□□ 2.12
RAB4B-206ENST00000600078 CDK12Q9NYV4 1490 aaPredicted RBP28.32■■■□□ 2.12
RAB4B-206ENST00000600078 PLEKHG1Q9ULL1 1385 aa28.31■■■□□ 2.12
RAB4B-206ENST00000600078 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.3■■■□□ 2.12
RAB4B-206ENST00000600078 NCOA3Q9Y6Q9 1424 aa28.3■■■□□ 2.12
RAB4B-206ENST00000600078 MPHOSPH9Q99550 1183 aa28.29■■■□□ 2.12
RAB4B-206ENST00000600078 DIP2AQ14689 1571 aa28.28■■■□□ 2.12
RAB4B-206ENST00000600078 RXRBP28702 533 aa28.28■■■□□ 2.12
RAB4B-206ENST00000600078 SPHKAPQ2M3C7 1700 aa28.24■■■□□ 2.11
RAB4B-206ENST00000600078 RIMS2Q9UQ26 1411 aa28.24■■■□□ 2.11
RAB4B-206ENST00000600078 TMEM131LA2VDJ0 1609 aa28.21■■■□□ 2.11
RAB4B-206ENST00000600078 C14orf37Q86TY3 774 aa28.21■■■□□ 2.11
RAB4B-206ENST00000600078 FOXD1Q16676 465 aa28.2■■■□□ 2.1
RAB4B-206ENST00000600078 CADPS2Q86UW7 1296 aa28.2■■■□□ 2.1
RAB4B-206ENST00000600078 PPP1R15AO75807 674 aaPredicted RBP28.19■■■□□ 2.1
RAB4B-206ENST00000600078 TBX22Q9Y458 520 aa28.18■■■□□ 2.1
RAB4B-206ENST00000600078 SRCAPQ6ZRS2 3230 aa28.18■■■□□ 2.1
RAB4B-206ENST00000600078 TRPM2O94759 1503 aa28.18■■■□□ 2.1
RAB4B-206ENST00000600078 AFF2P51816 1311 aa28.17■■■□□ 2.1
RAB4B-206ENST00000600078 NUTM2BA6NNL0 878 aaPredicted RBP28.16■■■□□ 2.1
RAB4B-206ENST00000600078 NUTM2EB1AL46 878 aaPredicted RBP28.16■■■□□ 2.1
RAB4B-206ENST00000600078 CHGAP10645 457 aaKnown RBP28.16■■■□□ 2.1
RAB4B-206ENST00000600078 ATF3P18847 181 aa28.16■■■□□ 2.1
RAB4B-206ENST00000600078 NUTM2AQ8IVF1 878 aaPredicted RBP28.16■■■□□ 2.1
RAB4B-206ENST00000600078 C19orf44Q9H6X5 657 aa28.16■■■□□ 2.1
RAB4B-206ENST00000600078 RGS12O14924 1447 aa28.16■■■□□ 2.1
RAB4B-206ENST00000600078 ADAMTS13Q76LX8 1427 aa28.16■■■□□ 2.1
RAB4B-206ENST00000600078 BRINP3Q76B58 766 aa28.14■■■□□ 2.1
RAB4B-206ENST00000600078 HDGFP51858 240 aaKnown RBP28.12■■■□□ 2.09
RAB4B-206ENST00000600078 ASXL1Q8IXJ9 1541 aa28.12■■■□□ 2.09
RAB4B-206ENST00000600078 CLTCL1P53675 1640 aa28.11■■■□□ 2.09
RAB4B-206ENST00000600078 NHSL1Q5SYE7 1610 aa28.11■■■□□ 2.09
RAB4B-206ENST00000600078 PIK3R4Q99570 1358 aa28.11■■■□□ 2.09
RAB4B-206ENST00000600078 DCCP43146 1447 aa28.08■■■□□ 2.09
RAB4B-206ENST00000600078 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.06■■■□□ 2.08
RAB4B-206ENST00000600078 CCDC144AA2RUR9 1427 aa28.04■■■□□ 2.08
RAB4B-206ENST00000600078 PTPRUQ92729 1446 aa28.03■■■□□ 2.08
RAB4B-206ENST00000600078 RBM6P78332 1123 aaKnown RBP28.03■■■□□ 2.08
RAB4B-206ENST00000600078 KIF1BO60333 1816 aa28.03■■■□□ 2.08
RAB4B-206ENST00000600078 NUTM2DQ5VT03 806 aaPredicted RBP28.02■■■□□ 2.08
RAB4B-206ENST00000600078 MST1RQ04912 1400 aa28.01■■■□□ 2.08
RAB4B-206ENST00000600078 XRN1Q8IZH2 1706 aaKnown RBP28.01■■■□□ 2.07
RAB4B-206ENST00000600078 QTRT2Q9H974 415 aaKnown RBP28.01■■■□□ 2.07
RAB4B-206ENST00000600078 ZNF326Q5BKZ1 582 aaKnown RBP28■■■□□ 2.07
RAB4B-206ENST00000600078 C8orf37Q96NL8 207 aa28■■■□□ 2.07
RAB4B-206ENST00000600078 AMOTL2Q9Y2J4 779 aa27.99■■■□□ 2.07
RAB4B-206ENST00000600078 ANKRD30BQ9BXX2 1392 aa27.99■■■□□ 2.07
RAB4B-206ENST00000600078 PNPLA6Q8IY17 1366 aa27.98■■■□□ 2.07
RAB4B-206ENST00000600078 PCGF6Q9BYE7 350 aa27.97■■■□□ 2.07
RAB4B-206ENST00000600078 LRRC59Q96AG4 307 aaKnown RBP27.96■■■□□ 2.07
RAB4B-206ENST00000600078 NRXN3Q9Y4C0 1643 aa27.94■■■□□ 2.06
RAB4B-206ENST00000600078 ATAD2Q6PL18 1390 aa27.94■■■□□ 2.06
RAB4B-206ENST00000600078 SETBP1Q9Y6X0 1596 aa27.9■■■□□ 2.06
RAB4B-206ENST00000600078 RPGRIP1LQ68CZ1 1315 aa27.9■■■□□ 2.06
RAB4B-206ENST00000600078 DDX17Q92841 729 aaKnown RBP27.89■■■□□ 2.06
RAB4B-206ENST00000600078 SPATA31E1Q6ZUB1 1445 aa27.89■■■□□ 2.06
RAB4B-206ENST00000600078 RGL3Q3MIN7 710 aa27.88■■■□□ 2.05
RAB4B-206ENST00000600078 NALCNQ8IZF0 1738 aa27.88■■■□□ 2.05
RAB4B-206ENST00000600078 NGLY1Q96IV0 654 aa27.88■■■□□ 2.05
RAB4B-206ENST00000600078 NEXMIFQ5QGS0 1516 aa27.87■■■□□ 2.05
RAB4B-206ENST00000600078 DHX57Q6P158 1386 aaKnown RBP27.86■■■□□ 2.05
RAB4B-206ENST00000600078 ADGRL3Q9HAR2 1447 aa27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms