RNA–Protein interactions for RNA: ENST00000599814.5

SYMPK-214, Transcript of symplekin, humanhuman

TSL 2 BASIC

Gene SYMPK, Length 6,537 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-214ENST00000599814 PRDM11Q9NQV5 511 aa16.04■□□□□ 0.16
SYMPK-214ENST00000599814 FHOD3Q2V2M9 1422 aa16.03■□□□□ 0.16
SYMPK-214ENST00000599814 NLRP6P59044 892 aa16.03■□□□□ 0.16
SYMPK-214ENST00000599814 PES1O00541 588 aaKnown RBP16.02■□□□□ 0.16
SYMPK-214ENST00000599814 GPS2Q13227 327 aa16.02■□□□□ 0.16
SYMPK-214ENST00000599814 RAPGEF3O95398 923 aa16.02■□□□□ 0.15
SYMPK-214ENST00000599814 NEXNQ0ZGT2 675 aa16.02■□□□□ 0.15
SYMPK-214ENST00000599814 TIMELESSQ9UNS1 1208 aa16.01■□□□□ 0.15
SYMPK-214ENST00000599814 NECTIN2Q92692 538 aa16.01■□□□□ 0.15
SYMPK-214ENST00000599814 GAPVD1Q14C86 1478 aa16.01■□□□□ 0.15
SYMPK-214ENST00000599814 PRG4Q92954 1404 aaPredicted RBP16.01■□□□□ 0.15
SYMPK-214ENST00000599814 RBM5P52756 815 aaKnown RBP eCLIP16.01■□□□□ 0.15
SYMPK-214ENST00000599814 ZNF771Q7L3S4 317 aaPredicted RBP16■□□□□ 0.15
SYMPK-214ENST00000599814 EVC2Q86UK5 1308 aa16■□□□□ 0.15
SYMPK-214ENST00000599814 AKAP17AQ02040 695 aaKnown RBP16■□□□□ 0.15
SYMPK-214ENST00000599814 SLC26A8Q96RN1 970 aa16■□□□□ 0.15
SYMPK-214ENST00000599814 MROH2BQ7Z745 1585 aa15.99■□□□□ 0.15
SYMPK-214ENST00000599814 UACAQ9BZF9 1416 aa15.99■□□□□ 0.15
SYMPK-214ENST00000599814 TNIKQ9UKE5 1360 aa15.99■□□□□ 0.15
SYMPK-214ENST00000599814 TSHZ2Q9NRE2 1034 aa15.99■□□□□ 0.15
SYMPK-214ENST00000599814 ST18O60284 1047 aa15.99■□□□□ 0.15
SYMPK-214ENST00000599814 SMC4Q9NTJ3 1288 aa15.99■□□□□ 0.15
SYMPK-214ENST00000599814 FOXD4L1Q9NU39 408 aa15.99■□□□□ 0.15
SYMPK-214ENST00000599814 HSPA5P11021 654 aaKnown RBP15.99■□□□□ 0.15
SYMPK-214ENST00000599814 CCDC146Q8IYE0 955 aa15.99■□□□□ 0.15
SYMPK-214ENST00000599814 MYCNP04198 464 aaPredicted RBP15.98■□□□□ 0.15
SYMPK-214ENST00000599814 LMOD3Q0VAK6 560 aa15.98■□□□□ 0.15
SYMPK-214ENST00000599814 CCDC70Q6NSX1 233 aa15.98■□□□□ 0.15
SYMPK-214ENST00000599814 PPP6R1Q9UPN7 881 aa15.98■□□□□ 0.15
SYMPK-214ENST00000599814 VSIG10Q8N0Z9 540 aa15.98■□□□□ 0.15
SYMPK-214ENST00000599814 RALBP1Q15311 655 aa15.98■□□□□ 0.15
SYMPK-214ENST00000599814 ATAD2BQ9ULI0 1458 aa15.98■□□□□ 0.15
SYMPK-214ENST00000599814 KIF16BQ96L93 1317 aa15.98■□□□□ 0.15
SYMPK-214ENST00000599814 HMMRO75330 724 aa15.97■□□□□ 0.15
SYMPK-214ENST00000599814 HMGB2P26583 209 aaKnown RBP15.97■□□□□ 0.15
SYMPK-214ENST00000599814 FYB1O15117 783 aa15.97■□□□□ 0.15
SYMPK-214ENST00000599814 IKQ13123 557 aaPredicted RBP15.97■□□□□ 0.15
SYMPK-214ENST00000599814 TPD52L1Q16890 204 aaPredicted RBP15.96■□□□□ 0.15
SYMPK-214ENST00000599814 BICDL1Q6ZP65 573 aa15.96■□□□□ 0.15
SYMPK-214ENST00000599814 ZNF219Q9P2Y4 722 aaPredicted RBP15.96■□□□□ 0.15
SYMPK-214ENST00000599814 CLEC11AQ9Y240 323 aa15.96■□□□□ 0.15
SYMPK-214ENST00000599814 PLIN1O60240 522 aa15.96■□□□□ 0.15
SYMPK-214ENST00000599814 SKOR2Q2VWA4 1001 aaPredicted RBP15.96■□□□□ 0.15
SYMPK-214ENST00000599814 MRC2Q9UBG0 1479 aa15.96■□□□□ 0.15
SYMPK-214ENST00000599814 TSR1Q2NL82 804 aaKnown RBP15.96■□□□□ 0.14
SYMPK-214ENST00000599814 CCDC43Q96MW1 224 aaKnown RBP15.96■□□□□ 0.14
SYMPK-214ENST00000599814 KIF6Q6ZMV9 814 aa15.95■□□□□ 0.14
SYMPK-214ENST00000599814 KIF3AQ9Y496 699 aa15.95■□□□□ 0.14
SYMPK-214ENST00000599814 RAPGEF2Q9Y4G8 1499 aa15.95■□□□□ 0.14
SYMPK-214ENST00000599814 C8orf37Q96NL8 207 aa15.95■□□□□ 0.14
SYMPK-214ENST00000599814 CCDC27Q2M243 656 aa15.94■□□□□ 0.14
SYMPK-214ENST00000599814 TPM2P07951 284 aa15.94■□□□□ 0.14
SYMPK-214ENST00000599814 SF3A1Q15459 793 aaKnown RBP15.94■□□□□ 0.14
SYMPK-214ENST00000599814 TEX35Q5T0J7 233 aa15.93■□□□□ 0.14
SYMPK-214ENST00000599814 MPHOSPH9Q99550 1183 aa15.93■□□□□ 0.14
SYMPK-214ENST00000599814 RAD54L2Q9Y4B4 1467 aa15.93■□□□□ 0.14
SYMPK-214ENST00000599814 GOLGA6L19H0YKK7 550 aa15.93■□□□□ 0.14
SYMPK-214ENST00000599814 NBPF8Q3BBV2 869 aa15.93■□□□□ 0.14
SYMPK-214ENST00000599814 NBPF14Q5TI25 921 aa15.93■□□□□ 0.14
SYMPK-214ENST00000599814 SYNE3Q6ZMZ3 975 aa15.93■□□□□ 0.14
SYMPK-214ENST00000599814 PATL2C9JE40 543 aaKnown RBP15.93■□□□□ 0.14
SYMPK-214ENST00000599814 IBSPP21815 317 aaPredicted RBP15.93■□□□□ 0.14
SYMPK-214ENST00000599814 CCAR2Q8N163 923 aaKnown RBP15.93■□□□□ 0.14
SYMPK-214ENST00000599814 APPP05067 770 aa15.93■□□□□ 0.14
SYMPK-214ENST00000599814 CC2D2AQ9P2K1 1620 aa15.92■□□□□ 0.14
SYMPK-214ENST00000599814 AIMP1Q12904 312 aaKnown RBP15.92■□□□□ 0.14
SYMPK-214ENST00000599814 TPM1P09493 284 aa15.92■□□□□ 0.14
SYMPK-214ENST00000599814 TATP17735 454 aaPredicted RBP15.92■□□□□ 0.14
SYMPK-214ENST00000599814 AFAP1Q8N556 730 aa15.92■□□□□ 0.14
SYMPK-214ENST00000599814 ARHGAP5Q13017 1502 aa15.92■□□□□ 0.14
SYMPK-214ENST00000599814 GSE1Q14687 1217 aa15.9■□□□□ 0.14
SYMPK-214ENST00000599814 H3BQV1 296 aa15.9■□□□□ 0.14
SYMPK-214ENST00000599814 CEBPAP49715 358 aaPredicted RBP15.9■□□□□ 0.14
SYMPK-214ENST00000599814 IFFO2Q5TF58 517 aa15.9■□□□□ 0.14
SYMPK-214ENST00000599814 C9orf78Q9NZ63 289 aaPredicted RBP15.9■□□□□ 0.14
SYMPK-214ENST00000599814 FOXD4L5Q5VV16 416 aaPredicted RBP15.9■□□□□ 0.14
SYMPK-214ENST00000599814 FOXD4L4Q8WXT5 416 aaPredicted RBP15.9■□□□□ 0.14
SYMPK-214ENST00000599814 SETD5Q9C0A6 1442 aa15.9■□□□□ 0.14
SYMPK-214ENST00000599814 RILPL2Q969X0 211 aa15.89■□□□□ 0.13
SYMPK-214ENST00000599814 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.89■□□□□ 0.131e-6■■■■■ 166.9
SYMPK-214ENST00000599814 DDX58O95786 925 aaKnown RBP15.89■□□□□ 0.13
SYMPK-214ENST00000599814 DHX57Q6P158 1386 aaKnown RBP15.88■□□□□ 0.13
SYMPK-214ENST00000599814 SPDYE4A6NLX3 237 aa15.88■□□□□ 0.13
SYMPK-214ENST00000599814 TMEM132AQ24JP5 1023 aa15.88■□□□□ 0.13
SYMPK-214ENST00000599814 CCDC144AA2RUR9 1427 aa15.88■□□□□ 0.13
SYMPK-214ENST00000599814 ATP6V1DQ9Y5K8 247 aa15.88■□□□□ 0.13
SYMPK-214ENST00000599814 WWC3Q9ULE0 1092 aa15.88■□□□□ 0.13
SYMPK-214ENST00000599814 CHMP4CQ96CF2 233 aa15.87■□□□□ 0.13
SYMPK-214ENST00000599814 MTMR7Q9Y216 660 aa15.87■□□□□ 0.13
SYMPK-214ENST00000599814 DDX49Q9Y6V7 483 aaKnown RBP15.87■□□□□ 0.13
SYMPK-214ENST00000599814 POLD1P28340 1107 aa15.87■□□□□ 0.13
SYMPK-214ENST00000599814 CABP4P57796 275 aa15.87■□□□□ 0.13
SYMPK-214ENST00000599814 ELL2O00472 640 aaPredicted RBP15.87■□□□□ 0.13
SYMPK-214ENST00000599814 RRP7AQ9Y3A4 280 aaKnown RBP15.87■□□□□ 0.13
SYMPK-214ENST00000599814 BECN2A8MW95 431 aa15.87■□□□□ 0.13
SYMPK-214ENST00000599814 ZC3H6P61129 1189 aaKnown RBP15.86■□□□□ 0.13
SYMPK-214ENST00000599814 CENPJQ9HC77 1338 aaPredicted RBP15.86■□□□□ 0.13
SYMPK-214ENST00000599814 RIC3Q7Z5B4 369 aa15.86■□□□□ 0.13
SYMPK-214ENST00000599814 ZNF592Q92610 1267 aa15.86■□□□□ 0.13
SYMPK-214ENST00000599814 LMTK3Q96Q04 1460 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms