RNA–Protein interactions for RNA: ENST00000598502.5

TRPM4-209, Transcript of transient receptor potential cation channel subfamily M member 4, humanhuman

TSL 1 (best)

Gene TRPM4, Length 3,695 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4-209ENST00000598502 CFAP70Q5T0N1 1121 aa20.2■□□□□ 0.82
TRPM4-209ENST00000598502 KANK1Q14678 1352 aa20.19■□□□□ 0.82
TRPM4-209ENST00000598502 TRPM1Q7Z4N2 1603 aa20.17■□□□□ 0.82
TRPM4-209ENST00000598502 UNC13BO14795 1591 aa20.17■□□□□ 0.82
TRPM4-209ENST00000598502 WDR43Q15061 677 aaKnown RBP eCLIP20.16■□□□□ 0.82
TRPM4-209ENST00000598502 FANCAO15360 1455 aa20.16■□□□□ 0.82
TRPM4-209ENST00000598502 PARD3Q8TEW0 1356 aa20.16■□□□□ 0.82
TRPM4-209ENST00000598502 NUTM2DQ5VT03 806 aaPredicted RBP20.16■□□□□ 0.82
TRPM4-209ENST00000598502 MAST1Q9Y2H9 1570 aa20.16■□□□□ 0.82
TRPM4-209ENST00000598502 LRPPRCP42704 1394 aaKnown RBP20.15■□□□□ 0.82
TRPM4-209ENST00000598502 GPRASP1Q5JY77 1395 aa20.15■□□□□ 0.82
TRPM4-209ENST00000598502 ABCC1P33527 1531 aa20.15■□□□□ 0.82
TRPM4-209ENST00000598502 ADAMTS8Q9UP79 889 aa20.15■□□□□ 0.82
TRPM4-209ENST00000598502 GZF1Q9H116 711 aaPredicted RBP20.14■□□□□ 0.81
TRPM4-209ENST00000598502 COL17A1Q9UMD9 1497 aaPredicted RBP20.14■□□□□ 0.81
TRPM4-209ENST00000598502 IQGAP3Q86VI3 1631 aa20.14■□□□□ 0.81
TRPM4-209ENST00000598502 PLXNC1O60486 1568 aa20.13■□□□□ 0.81
TRPM4-209ENST00000598502 SPRYD3Q8NCJ5 442 aa20.13■□□□□ 0.81
TRPM4-209ENST00000598502 RNF123Q5XPI4 1314 aa20.12■□□□□ 0.81
TRPM4-209ENST00000598502 TNNT2P45379 298 aaPredicted RBP20.11■□□□□ 0.81
TRPM4-209ENST00000598502 CCDC146Q8IYE0 955 aa20.11■□□□□ 0.81
TRPM4-209ENST00000598502 ADGRL1O94910 1474 aa20.11■□□□□ 0.81
TRPM4-209ENST00000598502 ADGRF5Q8IZF2 1346 aa20.11■□□□□ 0.81
TRPM4-209ENST00000598502 FAM43AQ8N2R8 423 aa20.11■□□□□ 0.81
TRPM4-209ENST00000598502 WDR7Q9Y4E6 1490 aa20.1■□□□□ 0.81
TRPM4-209ENST00000598502 POGKQ9P215 609 aa20.09■□□□□ 0.81
TRPM4-209ENST00000598502 CLASP1Q7Z460 1538 aa20.09■□□□□ 0.81
TRPM4-209ENST00000598502 CDCA8Q53HL2 280 aa20.09■□□□□ 0.81
TRPM4-209ENST00000598502 PPP2R1AP30153 589 aa20.08■□□□□ 0.81
TRPM4-209ENST00000598502 TRAK1Q9UPV9 953 aa20.08■□□□□ 0.81
TRPM4-209ENST00000598502 UHRF1BP1LA0JNW5 1464 aa20.08■□□□□ 0.8
TRPM4-209ENST00000598502 ATP10AO60312 1499 aa20.08■□□□□ 0.8
TRPM4-209ENST00000598502 C20orf194Q5TEA3 1177 aa20.07■□□□□ 0.8
TRPM4-209ENST00000598502 ASXL2Q76L83 1435 aa20.07■□□□□ 0.8
TRPM4-209ENST00000598502 PNNQ9H307 717 aaKnown RBP20.06■□□□□ 0.8
TRPM4-209ENST00000598502 PRDM15P57071 1507 aaPredicted RBP20.06■□□□□ 0.8
TRPM4-209ENST00000598502 FAM161AQ3B820 660 aa20.06■□□□□ 0.8
TRPM4-209ENST00000598502 TMEM132EQ6IEE7 984 aa20.05■□□□□ 0.8
TRPM4-209ENST00000598502 UGGT1Q9NYU2 1555 aa20.05■□□□□ 0.8
TRPM4-209ENST00000598502 CFAP65Q6ZU64 1925 aaKnown RBP20.04■□□□□ 0.8
TRPM4-209ENST00000598502 HSP90AA2PQ14568 343 aaPredicted RBP20.04■□□□□ 0.8
TRPM4-209ENST00000598502 ZFYVE16Q7Z3T8 1539 aa20.03■□□□□ 0.8
TRPM4-209ENST00000598502 SAFB2Q14151 953 aaKnown RBP eCLIP20.03■□□□□ 0.8
TRPM4-209ENST00000598502 RAPGEF3O95398 923 aa20.03■□□□□ 0.8
TRPM4-209ENST00000598502 OSCARQ8IYS5 282 aa20.03■□□□□ 0.8
TRPM4-209ENST00000598502 E9PCH4 1651 aa20.03■□□□□ 0.8
TRPM4-209ENST00000598502 PDE3BQ13370 1112 aa20.03■□□□□ 0.8
TRPM4-209ENST00000598502 MAGI2Q86UL8 1455 aa20.02■□□□□ 0.8
TRPM4-209ENST00000598502 AMER1Q5JTC6 1135 aaPredicted RBP20.02■□□□□ 0.8
TRPM4-209ENST00000598502 EIF2AK4Q9P2K8 1649 aaKnown RBP20.02■□□□□ 0.8
TRPM4-209ENST00000598502 ATP7AQ04656 1500 aa20.02■□□□□ 0.8
TRPM4-209ENST00000598502 RTEL1-TNFRSF6BF6WH68 1400 aa20.02■□□□□ 0.8
TRPM4-209ENST00000598502 HSP90AA1P07900 732 aaKnown RBP20.01■□□□□ 0.79
TRPM4-209ENST00000598502 CANXP27824 592 aaKnown RBP20■□□□□ 0.79
TRPM4-209ENST00000598502 SCAF11Q99590 1463 aaKnown RBP20■□□□□ 0.79
TRPM4-209ENST00000598502 ZMYND15Q9H091 742 aa19.99■□□□□ 0.79
TRPM4-209ENST00000598502 NEUROD2Q15784 382 aa19.99■□□□□ 0.79
TRPM4-209ENST00000598502 EIF3AQ14152 1382 aaKnown RBP19.99■□□□□ 0.79
TRPM4-209ENST00000598502 RRAGDQ9NQL2 400 aaPredicted RBP19.98■□□□□ 0.79
TRPM4-209ENST00000598502 CLTCL1P53675 1640 aa19.98■□□□□ 0.79
TRPM4-209ENST00000598502 BECN1Q14457 450 aa19.98■□□□□ 0.79
TRPM4-209ENST00000598502 APAF1O14727 1248 aa19.97■□□□□ 0.79
TRPM4-209ENST00000598502 L1TD1Q5T7N2 865 aaKnown RBP19.96■□□□□ 0.79
TRPM4-209ENST00000598502 TRPM2O94759 1503 aa19.95■□□□□ 0.78
TRPM4-209ENST00000598502 CENPQQ7L2Z9 268 aaPredicted RBP19.94■□□□□ 0.78
TRPM4-209ENST00000598502 PTPRTO14522 1441 aa19.94■□□□□ 0.78
TRPM4-209ENST00000598502 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.94■□□□□ 0.78
TRPM4-209ENST00000598502 SLC12A5Q9H2X9 1139 aa19.94■□□□□ 0.78
TRPM4-209ENST00000598502 STK26Q9P289 416 aa19.94■□□□□ 0.78
TRPM4-209ENST00000598502 CD109Q6YHK3 1445 aa19.93■□□□□ 0.78
TRPM4-209ENST00000598502 CARD14Q9BXL6 1004 aa19.93■□□□□ 0.78
TRPM4-209ENST00000598502 MADDQ8WXG6 1647 aa19.93■□□□□ 0.78
TRPM4-209ENST00000598502 NOS1P29475 1434 aa19.93■□□□□ 0.78
TRPM4-209ENST00000598502 GOLGA2Q08379 1002 aa19.92■□□□□ 0.78
TRPM4-209ENST00000598502 STAC3Q96MF2 364 aa19.92■□□□□ 0.78
TRPM4-209ENST00000598502 PLEKHH1Q9ULM0 1364 aa19.92■□□□□ 0.78
TRPM4-209ENST00000598502 CENPJQ9HC77 1338 aaPredicted RBP19.91■□□□□ 0.78
TRPM4-209ENST00000598502 UPF2Q9HAU5 1272 aaKnown RBP19.91■□□□□ 0.78
TRPM4-209ENST00000598502 GOLGA6L3A6NEY3 463 aa19.91■□□□□ 0.78
TRPM4-209ENST00000598502 SPHKAPQ2M3C7 1700 aa19.91■□□□□ 0.78
TRPM4-209ENST00000598502 MORC1Q86VD1 984 aa19.9■□□□□ 0.78
TRPM4-209ENST00000598502 RRP7AQ9Y3A4 280 aaKnown RBP19.89■□□□□ 0.78
TRPM4-209ENST00000598502 C8orf34Q49A92 452 aa19.87■□□□□ 0.77
TRPM4-209ENST00000598502 LAMC1P11047 1609 aa19.87■□□□□ 0.77
TRPM4-209ENST00000598502 BLMP54132 1417 aaPredicted RBP19.86■□□□□ 0.77
TRPM4-209ENST00000598502 CYB5RLQ6IPT4 315 aa19.86■□□□□ 0.77
TRPM4-209ENST00000598502 TET3O43151 1660 aa19.86■□□□□ 0.77
TRPM4-209ENST00000598502 DUSP27Q5VZP5 1158 aa19.86■□□□□ 0.77
TRPM4-209ENST00000598502 TRIM44Q96DX7 344 aaPredicted RBP19.86■□□□□ 0.77
TRPM4-209ENST00000598502 SPINK5Q9NQ38 1064 aaPredicted RBP19.86■□□□□ 0.77
TRPM4-209ENST00000598502 ASXL1Q8IXJ9 1541 aa19.85■□□□□ 0.77
TRPM4-209ENST00000598502 PANK2Q9BZ23 570 aa19.84■□□□□ 0.77
TRPM4-209ENST00000598502 ARID3AQ99856 593 aa19.84■□□□□ 0.77
TRPM4-209ENST00000598502 ZNF518AQ6AHZ1 1483 aa19.84■□□□□ 0.77
TRPM4-209ENST00000598502 ARAP3Q8WWN8 1544 aa19.84■□□□□ 0.77
TRPM4-209ENST00000598502 INO80Q9ULG1 1556 aaPredicted RBP19.83■□□□□ 0.77
TRPM4-209ENST00000598502 RNF17Q9BXT8 1623 aaKnown RBP19.83■□□□□ 0.77
TRPM4-209ENST00000598502 ABCA9Q8IUA7 1624 aa19.83■□□□□ 0.77
TRPM4-209ENST00000598502 CABP2Q9NPB3 220 aa19.82■□□□□ 0.76
TRPM4-209ENST00000598502 CEP152O94986 1710 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms