RNA–Protein interactions for RNA: ENST00000598166.2

LTBP4-220, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 5

Gene LTBP4, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-220ENST00000598166 SLC26A8Q96RN1 970 aa22.99■■□□□ 1.27
LTBP4-220ENST00000598166 PIK3C2BO00750 1634 aa22.99■■□□□ 1.27
LTBP4-220ENST00000598166 IQGAP3Q86VI3 1631 aa22.98■■□□□ 1.27
LTBP4-220ENST00000598166 PROSER2Q86WR7 435 aaPredicted RBP22.98■■□□□ 1.27
LTBP4-220ENST00000598166 STAG3Q9UJ98 1225 aa22.98■■□□□ 1.27
LTBP4-220ENST00000598166 TET3O43151 1660 aa22.96■■□□□ 1.27
LTBP4-220ENST00000598166 ROBO1Q9Y6N7 1651 aa22.93■■□□□ 1.26
LTBP4-220ENST00000598166 SETD5Q9C0A6 1442 aa22.92■■□□□ 1.26
LTBP4-220ENST00000598166 TRIM52Q96A61 297 aa22.92■■□□□ 1.26
LTBP4-220ENST00000598166 SLAIN2Q9P270 581 aa22.9■■□□□ 1.26
LTBP4-220ENST00000598166 RPRD2Q5VT52 1461 aaKnown RBP22.89■■□□□ 1.25
LTBP4-220ENST00000598166 E9PCH4 1651 aa22.88■■□□□ 1.25
LTBP4-220ENST00000598166 KDM5AP29375 1690 aaKnown RBP22.88■■□□□ 1.25
LTBP4-220ENST00000598166 NOS1P29475 1434 aa22.88■■□□□ 1.25
LTBP4-220ENST00000598166 RAB3GAP2Q9H2M9 1393 aa22.87■■□□□ 1.25
LTBP4-220ENST00000598166 NKTRP30414 1462 aaKnown RBP22.85■■□□□ 1.25
LTBP4-220ENST00000598166 MSH6P52701 1360 aa22.84■■□□□ 1.25
LTBP4-220ENST00000598166 NWD1Q149M9 1564 aa22.84■■□□□ 1.25
LTBP4-220ENST00000598166 SLC52A1Q9NWF4 448 aa22.83■■□□□ 1.25
LTBP4-220ENST00000598166 JCADQ9P266 1359 aa22.83■■□□□ 1.25
LTBP4-220ENST00000598166 BCANQ96GW7 911 aa22.82■■□□□ 1.24
LTBP4-220ENST00000598166 SLC4A1APQ9BWU0 796 aaKnown RBP22.8■■□□□ 1.24
LTBP4-220ENST00000598166 ADGRB3O60242 1522 aa22.8■■□□□ 1.24
LTBP4-220ENST00000598166 SETD1AO15047 1707 aaKnown RBP22.78■■□□□ 1.24
LTBP4-220ENST00000598166 PHLPP1O60346 1717 aa22.77■■□□□ 1.24
LTBP4-220ENST00000598166 ZFYVE9O95405 1425 aa22.77■■□□□ 1.24
LTBP4-220ENST00000598166 PLEKHG1Q9ULL1 1385 aa22.76■■□□□ 1.23
LTBP4-220ENST00000598166 FOXD1Q16676 465 aa22.74■■□□□ 1.23
LTBP4-220ENST00000598166 TBX22Q9Y458 520 aa22.74■■□□□ 1.23
LTBP4-220ENST00000598166 LRP6O75581 1613 aa22.74■■□□□ 1.23
LTBP4-220ENST00000598166 COL16A1Q07092 1604 aaPredicted RBP22.74■■□□□ 1.23
LTBP4-220ENST00000598166 TRIM26Q12899 539 aaPredicted RBP22.73■■□□□ 1.23
LTBP4-220ENST00000598166 UPF1Q92900 1129 aaKnown RBP eCLIP22.73■■□□□ 1.23
LTBP4-220ENST00000598166 MPHOSPH9Q99550 1183 aa22.73■■□□□ 1.23
LTBP4-220ENST00000598166 SPHKAPQ2M3C7 1700 aa22.73■■□□□ 1.23
LTBP4-220ENST00000598166 SPATA31A6Q5VVP1 1343 aa22.72■■□□□ 1.23
LTBP4-220ENST00000598166 RIMS2Q9UQ26 1411 aa22.72■■□□□ 1.23
LTBP4-220ENST00000598166 CHD2O14647 1828 aaKnown RBP22.71■■□□□ 1.23
LTBP4-220ENST00000598166 PPP1R15AO75807 674 aaPredicted RBP22.7■■□□□ 1.22
LTBP4-220ENST00000598166 HDGFP51858 240 aaKnown RBP22.7■■□□□ 1.22
LTBP4-220ENST00000598166 NCOA3Q9Y6Q9 1424 aa22.7■■□□□ 1.22
LTBP4-220ENST00000598166 TRPM2O94759 1503 aa22.7■■□□□ 1.22
LTBP4-220ENST00000598166 ACIN1Q9UKV3 1341 aaKnown RBP22.68■■□□□ 1.22
LTBP4-220ENST00000598166 CHGAP10645 457 aaKnown RBP22.68■■□□□ 1.22
LTBP4-220ENST00000598166 ZNF772Q68DY9 489 aaPredicted RBP22.68■■□□□ 1.22
LTBP4-220ENST00000598166 C19orf44Q9H6X5 657 aa22.67■■□□□ 1.22
LTBP4-220ENST00000598166 CLTCL1P53675 1640 aa22.67■■□□□ 1.22
LTBP4-220ENST00000598166 HRCP23327 699 aa22.66■■□□□ 1.22
LTBP4-220ENST00000598166 MEX3CQ5U5Q3 659 aaKnown RBP22.66■■□□□ 1.22
LTBP4-220ENST00000598166 C14orf37Q86TY3 774 aa22.66■■□□□ 1.22
LTBP4-220ENST00000598166 ADAMTS13Q76LX8 1427 aa22.65■■□□□ 1.22
LTBP4-220ENST00000598166 TMEM131LA2VDJ0 1609 aa22.65■■□□□ 1.22
LTBP4-220ENST00000598166 NUTM2DQ5VT03 806 aaPredicted RBP22.65■■□□□ 1.22
LTBP4-220ENST00000598166 CADPS2Q86UW7 1296 aa22.65■■□□□ 1.22
LTBP4-220ENST00000598166 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.63■■□□□ 1.214e-7■□□□□ 9.2
LTBP4-220ENST00000598166 MYO5BQ9ULV0 1848 aa22.63■■□□□ 1.21
LTBP4-220ENST00000598166 AHDC1Q5TGY3 1603 aaPredicted RBP22.62■■□□□ 1.21
LTBP4-220ENST00000598166 ATF3P18847 181 aa22.62■■□□□ 1.21
LTBP4-220ENST00000598166 RXRBP28702 533 aa22.61■■□□□ 1.21
LTBP4-220ENST00000598166 BRINP3Q76B58 766 aa22.61■■□□□ 1.21
LTBP4-220ENST00000598166 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.6■■□□□ 1.21
LTBP4-220ENST00000598166 PIK3R4Q99570 1358 aa22.59■■□□□ 1.21
LTBP4-220ENST00000598166 AMOTL2Q9Y2J4 779 aa22.58■■□□□ 1.21
LTBP4-220ENST00000598166 NUTM2BA6NNL0 878 aaPredicted RBP22.57■■□□□ 1.2
LTBP4-220ENST00000598166 NUTM2EB1AL46 878 aaPredicted RBP22.57■■□□□ 1.2
LTBP4-220ENST00000598166 NUTM2AQ8IVF1 878 aaPredicted RBP22.57■■□□□ 1.2
LTBP4-220ENST00000598166 SHPRHQ149N8 1683 aa22.57■■□□□ 1.2
LTBP4-220ENST00000598166 CCDC144AA2RUR9 1427 aa22.57■■□□□ 1.2
LTBP4-220ENST00000598166 PTPRUQ92729 1446 aa22.57■■□□□ 1.2
LTBP4-220ENST00000598166 DIP2AQ14689 1571 aa22.56■■□□□ 1.2
LTBP4-220ENST00000598166 ZNF326Q5BKZ1 582 aaKnown RBP22.54■■□□□ 1.2
LTBP4-220ENST00000598166 AFF2P51816 1311 aa22.53■■□□□ 1.2
LTBP4-220ENST00000598166 CDK12Q9NYV4 1490 aaPredicted RBP22.53■■□□□ 1.2
LTBP4-220ENST00000598166 ANKRD30BQ9BXX2 1392 aa22.5■■□□□ 1.19
LTBP4-220ENST00000598166 KIF1BO60333 1816 aa22.5■■□□□ 1.19
LTBP4-220ENST00000598166 DCCP43146 1447 aa22.48■■□□□ 1.19
LTBP4-220ENST00000598166 NEXMIFQ5QGS0 1516 aa22.47■■□□□ 1.19
LTBP4-220ENST00000598166 ASXL1Q8IXJ9 1541 aa22.47■■□□□ 1.19
LTBP4-220ENST00000598166 PCGF6Q9BYE7 350 aa22.47■■□□□ 1.19
LTBP4-220ENST00000598166 MST1RQ04912 1400 aa22.47■■□□□ 1.19
LTBP4-220ENST00000598166 SPATA31E1Q6ZUB1 1445 aa22.47■■□□□ 1.19
LTBP4-220ENST00000598166 DDX17Q92841 729 aaKnown RBP22.46■■□□□ 1.19
LTBP4-220ENST00000598166 LRRC59Q96AG4 307 aaKnown RBP22.46■■□□□ 1.19
LTBP4-220ENST00000598166 QTRT2Q9H974 415 aaKnown RBP22.45■■□□□ 1.18
LTBP4-220ENST00000598166 RGL3Q3MIN7 710 aa22.44■■□□□ 1.18
LTBP4-220ENST00000598166 C8orf37Q96NL8 207 aa22.44■■□□□ 1.18
LTBP4-220ENST00000598166 RGS12O14924 1447 aa22.42■■□□□ 1.18
LTBP4-220ENST00000598166 METP08581 1390 aa22.42■■□□□ 1.18
LTBP4-220ENST00000598166 RBM6P78332 1123 aaKnown RBP22.42■■□□□ 1.18
LTBP4-220ENST00000598166 DHX57Q6P158 1386 aaKnown RBP22.41■■□□□ 1.18
LTBP4-220ENST00000598166 PNPLA6Q8IY17 1366 aa22.41■■□□□ 1.18
LTBP4-220ENST00000598166 SRCAPQ6ZRS2 3230 aa22.41■■□□□ 1.18
LTBP4-220ENST00000598166 XRN1Q8IZH2 1706 aaKnown RBP22.4■■□□□ 1.18
LTBP4-220ENST00000598166 NRXN3Q9Y4C0 1643 aa22.4■■□□□ 1.18
LTBP4-220ENST00000598166 NHSL1Q5SYE7 1610 aa22.39■■□□□ 1.18
LTBP4-220ENST00000598166 SETBP1Q9Y6X0 1596 aa22.38■■□□□ 1.17
LTBP4-220ENST00000598166 RPGRIP1LQ68CZ1 1315 aa22.37■■□□□ 1.17
LTBP4-220ENST00000598166 PPLO60437 1756 aa22.36■■□□□ 1.17
LTBP4-220ENST00000598166 ADGRL3Q9HAR2 1447 aa22.35■■□□□ 1.17
LTBP4-220ENST00000598166 NGLY1Q96IV0 654 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms