RNA–Protein interactions for RNA: ENST00000596940.5

C19orf54-206, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 3

Gene C19orf54, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-206ENST00000596940 PLEKHG1Q9ULL1 1385 aa21.3■■□□□ 1
C19orf54-206ENST00000596940 RIMS2Q9UQ26 1411 aa21.29■■□□□ 1
C19orf54-206ENST00000596940 TMEM94Q12767 1356 aa21.29■■□□□ 1
C19orf54-206ENST00000596940 STRCP1A6NGW2 1772 aa21.28■■□□□ 1
C19orf54-206ENST00000596940 TBX22Q9Y458 520 aa21.27■■□□□ 1
C19orf54-206ENST00000596940 ZFYVE9O95405 1425 aa21.27■■□□□ 1
C19orf54-206ENST00000596940 GCC2Q8IWJ2 1684 aa21.25■□□□□ 0.99
C19orf54-206ENST00000596940 ALKQ9UM73 1620 aa21.25■□□□□ 0.99
C19orf54-206ENST00000596940 IQGAP3Q86VI3 1631 aa21.24■□□□□ 0.99
C19orf54-206ENST00000596940 RRBP1Q9P2E9 1410 aaKnown RBP21.23■□□□□ 0.99
C19orf54-206ENST00000596940 NKTRP30414 1462 aaKnown RBP21.23■□□□□ 0.99
C19orf54-206ENST00000596940 FAM135BQ49AJ0 1406 aa21.22■□□□□ 0.99
C19orf54-206ENST00000596940 SENP3Q9H4L4 574 aaPredicted RBP21.22■□□□□ 0.99
C19orf54-206ENST00000596940 PHF23Q9BUL5 403 aaPredicted RBP21.21■□□□□ 0.99
C19orf54-206ENST00000596940 TMEM131LA2VDJ0 1609 aa21.21■□□□□ 0.99
C19orf54-206ENST00000596940 MSH6P52701 1360 aa21.21■□□□□ 0.99
C19orf54-206ENST00000596940 E9PCH4 1651 aa21.18■□□□□ 0.98
C19orf54-206ENST00000596940 NUTM2DQ5VT03 806 aaPredicted RBP21.18■□□□□ 0.98
C19orf54-206ENST00000596940 RBM33Q96EV2 1170 aaKnown RBP21.18■□□□□ 0.98
C19orf54-206ENST00000596940 PIK3R4Q99570 1358 aa21.18■□□□□ 0.98
C19orf54-206ENST00000596940 NCOA3Q9Y6Q9 1424 aa21.17■□□□□ 0.98
C19orf54-206ENST00000596940 ZNF326Q5BKZ1 582 aaKnown RBP21.16■□□□□ 0.98
C19orf54-206ENST00000596940 SLAIN2Q9P270 581 aa21.16■□□□□ 0.98
C19orf54-206ENST00000596940 NWD1Q149M9 1564 aa21.15■□□□□ 0.98
C19orf54-206ENST00000596940 MED1Q15648 1581 aaPredicted RBP21.15■□□□□ 0.98
C19orf54-206ENST00000596940 C14orf37Q86TY3 774 aa21.15■□□□□ 0.98
C19orf54-206ENST00000596940 NAIPQ13075 1403 aa21.13■□□□□ 0.97
C19orf54-206ENST00000596940 TRIM52Q96A61 297 aa21.13■□□□□ 0.97
C19orf54-206ENST00000596940 ADAMTS13Q76LX8 1427 aa21.12■□□□□ 0.97
C19orf54-206ENST00000596940 C19orf44Q9H6X5 657 aa21.11■□□□□ 0.97
C19orf54-206ENST00000596940 DIP2AQ14689 1571 aa21.1■□□□□ 0.97
C19orf54-206ENST00000596940 CADPS2Q86UW7 1296 aa21.1■□□□□ 0.97
C19orf54-206ENST00000596940 AMOTL2Q9Y2J4 779 aa21.1■□□□□ 0.97
C19orf54-206ENST00000596940 HFM1A2PYH4 1435 aa21.1■□□□□ 0.97
C19orf54-206ENST00000596940 XIRP1Q702N8 1843 aaKnown RBP21.09■□□□□ 0.97
C19orf54-206ENST00000596940 ATF3P18847 181 aa21.09■□□□□ 0.97
C19orf54-206ENST00000596940 SLC4A1APQ9BWU0 796 aaKnown RBP21.07■□□□□ 0.96
C19orf54-206ENST00000596940 MYO5BQ9ULV0 1848 aa21.06■□□□□ 0.96
C19orf54-206ENST00000596940 TRPM2O94759 1503 aa21.05■□□□□ 0.96
C19orf54-206ENST00000596940 CHD2O14647 1828 aaKnown RBP21.04■□□□□ 0.96
C19orf54-206ENST00000596940 VGFO15240 615 aaPredicted RBP21.04■□□□□ 0.96
C19orf54-206ENST00000596940 RPGRIP1LQ68CZ1 1315 aa21.02■□□□□ 0.95
C19orf54-206ENST00000596940 SPHKAPQ2M3C7 1700 aa21.01■□□□□ 0.95
C19orf54-206ENST00000596940 ACIN1Q9UKV3 1341 aaKnown RBP21.01■□□□□ 0.95
C19orf54-206ENST00000596940 ROBO1Q9Y6N7 1651 aa21■□□□□ 0.95
C19orf54-206ENST00000596940 JCADQ9P266 1359 aa20.98■□□□□ 0.95
C19orf54-206ENST00000596940 SETBP1Q9Y6X0 1596 aa20.98■□□□□ 0.95
C19orf54-206ENST00000596940 PTPRUQ92729 1446 aa20.98■□□□□ 0.95
C19orf54-206ENST00000596940 METP08581 1390 aa20.97■□□□□ 0.95
C19orf54-206ENST00000596940 DCCP43146 1447 aa20.96■□□□□ 0.95
C19orf54-206ENST00000596940 CLTCL1P53675 1640 aa20.93■□□□□ 0.94
C19orf54-206ENST00000596940 RGS17Q9UGC6 210 aaPredicted RBP20.93■□□□□ 0.94
C19orf54-206ENST00000596940 NEXMIFQ5QGS0 1516 aa20.92■□□□□ 0.94
C19orf54-206ENST00000596940 SPATA31A6Q5VVP1 1343 aa20.91■□□□□ 0.94
C19orf54-206ENST00000596940 BRINP3Q76B58 766 aa20.91■□□□□ 0.94
C19orf54-206ENST00000596940 MPHOSPH9Q99550 1183 aa20.9■□□□□ 0.94
C19orf54-206ENST00000596940 NRXN3Q9Y4C0 1643 aa20.89■□□□□ 0.94
C19orf54-206ENST00000596940 CCDC144AA2RUR9 1427 aa20.88■□□□□ 0.93
C19orf54-206ENST00000596940 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.88■□□□□ 0.93
C19orf54-206ENST00000596940 FOXD1Q16676 465 aa20.87■□□□□ 0.93
C19orf54-206ENST00000596940 KIF1BO60333 1816 aa20.87■□□□□ 0.93
C19orf54-206ENST00000596940 PHLPP1O60346 1717 aa20.87■□□□□ 0.93
C19orf54-206ENST00000596940 ADGRL3Q9HAR2 1447 aa20.87■□□□□ 0.93
C19orf54-206ENST00000596940 XRN1Q8IZH2 1706 aaKnown RBP20.86■□□□□ 0.93
C19orf54-206ENST00000596940 MEX3CQ5U5Q3 659 aaKnown RBP20.85■□□□□ 0.93
C19orf54-206ENST00000596940 LRRC59Q96AG4 307 aaKnown RBP20.84■□□□□ 0.93
C19orf54-206ENST00000596940 PTCH1Q13635 1447 aa20.84■□□□□ 0.93
C19orf54-206ENST00000596940 AHDC1Q5TGY3 1603 aaPredicted RBP20.83■□□□□ 0.93
C19orf54-206ENST00000596940 POTEAQ6S8J7 498 aa20.83■□□□□ 0.93
C19orf54-206ENST00000596940 MST1RQ04912 1400 aa20.83■□□□□ 0.93
C19orf54-206ENST00000596940 ANKRD30BQ9BXX2 1392 aa20.83■□□□□ 0.92
C19orf54-206ENST00000596940 RGL3Q3MIN7 710 aa20.82■□□□□ 0.92
C19orf54-206ENST00000596940 COL16A1Q07092 1604 aaPredicted RBP20.82■□□□□ 0.92
C19orf54-206ENST00000596940 ZNF772Q68DY9 489 aaPredicted RBP20.81■□□□□ 0.92
C19orf54-206ENST00000596940 PRAG1Q86YV5 1406 aa20.79■□□□□ 0.92
C19orf54-206ENST00000596940 SETD5Q9C0A6 1442 aa20.79■□□□□ 0.92
C19orf54-206ENST00000596940 ROBO2Q9HCK4 1378 aa20.79■□□□□ 0.92
C19orf54-206ENST00000596940 ASXL1Q8IXJ9 1541 aa20.78■□□□□ 0.92
C19orf54-206ENST00000596940 ADGRF5Q8IZF2 1346 aa20.77■□□□□ 0.91
C19orf54-206ENST00000596940 SPATA31E1Q6ZUB1 1445 aa20.76■□□□□ 0.91
C19orf54-206ENST00000596940 NUTM2BA6NNL0 878 aaPredicted RBP20.75■□□□□ 0.91
C19orf54-206ENST00000596940 NUTM2EB1AL46 878 aaPredicted RBP20.75■□□□□ 0.91
C19orf54-206ENST00000596940 NUTM2AQ8IVF1 878 aaPredicted RBP20.75■□□□□ 0.91
C19orf54-206ENST00000596940 C1orf167Q5SNV9 1468 aa20.75■□□□□ 0.91
C19orf54-206ENST00000596940 STK26Q9P289 416 aa20.72■□□□□ 0.91
C19orf54-206ENST00000596940 ORAI2Q96SN7 254 aa20.71■□□□□ 0.91
C19orf54-206ENST00000596940 LRP6O75581 1613 aa20.71■□□□□ 0.91
C19orf54-206ENST00000596940 SHPRHQ149N8 1683 aa20.7■□□□□ 0.9
C19orf54-206ENST00000596940 LRPPRCP42704 1394 aaKnown RBP20.7■□□□□ 0.9
C19orf54-206ENST00000596940 ABCC11Q96J66 1382 aa20.7■□□□□ 0.9
C19orf54-206ENST00000596940 PPLO60437 1756 aa20.69■□□□□ 0.9
C19orf54-206ENST00000596940 DDX17Q92841 729 aaKnown RBP20.69■□□□□ 0.9
C19orf54-206ENST00000596940 SOS2Q07890 1332 aaPredicted RBP20.68■□□□□ 0.9
C19orf54-206ENST00000596940 RAB3GAP2Q9H2M9 1393 aa20.68■□□□□ 0.9
C19orf54-206ENST00000596940 RXRBP28702 533 aa20.67■□□□□ 0.9
C19orf54-206ENST00000596940 ESCO1Q5FWF5 840 aa20.67■□□□□ 0.9
C19orf54-206ENST00000596940 SIRT1Q96EB6 747 aa20.67■□□□□ 0.9
C19orf54-206ENST00000596940 PNPLA6Q8IY17 1366 aa20.67■□□□□ 0.9
C19orf54-206ENST00000596940 TECPR2O15040 1411 aa20.67■□□□□ 0.9
C19orf54-206ENST00000596940 NALCNQ8IZF0 1738 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms