RNA–Protein interactions for RNA: ENST00000596828.1

LINC01440-203, Transcript of long intergenic non-protein coding RNA 1440, humanhuman

TSL 5 BASIC

Gene LINC01440, Length 1,005 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01440-203ENST00000596828 ATXN8OSP0DMR3 200 aa15.05■□□□□ -0
LINC01440-203ENST00000596828 RRBP1Q9P2E9 1410 aaKnown RBP15.05■□□□□ -0
LINC01440-203ENST00000596828 IQGAP3Q86VI3 1631 aa15.04■□□□□ -0
LINC01440-203ENST00000596828 NPHP4O75161 1426 aaPredicted RBP15.04■□□□□ -0
LINC01440-203ENST00000596828 IDI1Q13907 227 aa15.03■□□□□ -0
LINC01440-203ENST00000596828 NUP155O75694 1391 aa15.01□□□□□ -0.01
LINC01440-203ENST00000596828 TXNDC2Q86VQ3 553 aa15.01□□□□□ -0.01
LINC01440-203ENST00000596828 MED14O60244 1454 aa15.01□□□□□ -0.01
LINC01440-203ENST00000596828 STRCP1A6NGW2 1772 aa15.01□□□□□ -0.01
LINC01440-203ENST00000596828 NOS1P29475 1434 aa15□□□□□ -0.01
LINC01440-203ENST00000596828 KDM5AP29375 1690 aaKnown RBP15□□□□□ -0.01
LINC01440-203ENST00000596828 LTKP29376 864 aa15□□□□□ -0.01
LINC01440-203ENST00000596828 SCAF11Q99590 1463 aaKnown RBP15□□□□□ -0.01
LINC01440-203ENST00000596828 SLIT1O75093 1534 aa14.99□□□□□ -0.01
LINC01440-203ENST00000596828 RPRD2Q5VT52 1461 aaKnown RBP14.99□□□□□ -0.01
LINC01440-203ENST00000596828 ADGRB3O60242 1522 aa14.98□□□□□ -0.01
LINC01440-203ENST00000596828 ARHGAP23Q9P227 1491 aa14.98□□□□□ -0.01
LINC01440-203ENST00000596828 EID1Q9Y6B2 187 aa14.98□□□□□ -0.01
LINC01440-203ENST00000596828 CHGAP10645 457 aaKnown RBP14.97□□□□□ -0.01
LINC01440-203ENST00000596828 TMEM2Q9UHN6 1383 aa14.97□□□□□ -0.01
LINC01440-203ENST00000596828 IQSEC2Q5JU85 1478 aa14.96□□□□□ -0.01
LINC01440-203ENST00000596828 SLC24A1O60721 1099 aa14.96□□□□□ -0.01
LINC01440-203ENST00000596828 SPHKAPQ2M3C7 1700 aa14.96□□□□□ -0.01
LINC01440-203ENST00000596828 SLC52A1Q9NWF4 448 aa14.96□□□□□ -0.01
LINC01440-203ENST00000596828 NAIPQ13075 1403 aa14.95□□□□□ -0.02
LINC01440-203ENST00000596828 UBAP1LF5GYI3 381 aa14.95□□□□□ -0.02
LINC01440-203ENST00000596828 TMEM131LA2VDJ0 1609 aa14.95□□□□□ -0.02
LINC01440-203ENST00000596828 CPS1P31327 1500 aa14.94□□□□□ -0.02
LINC01440-203ENST00000596828 AMER1Q5JTC6 1135 aaPredicted RBP14.94□□□□□ -0.02
LINC01440-203ENST00000596828 BCANQ96GW7 911 aa14.94□□□□□ -0.02
LINC01440-203ENST00000596828 TRIM52Q96A61 297 aa14.93□□□□□ -0.02
LINC01440-203ENST00000596828 NUTM2DQ5VT03 806 aaPredicted RBP14.91□□□□□ -0.02
LINC01440-203ENST00000596828 SLC26A8Q96RN1 970 aa14.91□□□□□ -0.02
LINC01440-203ENST00000596828 XIRP1Q702N8 1843 aaKnown RBP14.9□□□□□ -0.02
LINC01440-203ENST00000596828 PPP1R15AO75807 674 aaPredicted RBP14.9□□□□□ -0.02
LINC01440-203ENST00000596828 PIP4K2BP78356 416 aa14.89□□□□□ -0.03
LINC01440-203ENST00000596828 RTN4Q9NQC3 1192 aaKnown RBP14.89□□□□□ -0.03
LINC01440-203ENST00000596828 HFM1A2PYH4 1435 aa14.89□□□□□ -0.03
LINC01440-203ENST00000596828 RIMS2Q9UQ26 1411 aa14.89□□□□□ -0.03
LINC01440-203ENST00000596828 KIF1BO60333 1816 aa14.88□□□□□ -0.03
LINC01440-203ENST00000596828 LRRC7Q96NW7 1537 aa14.87□□□□□ -0.03
LINC01440-203ENST00000596828 ZFYVE9O95405 1425 aa14.86□□□□□ -0.03
LINC01440-203ENST00000596828 CLTCL1P53675 1640 aa14.86□□□□□ -0.03
LINC01440-203ENST00000596828 TOM1O60784 492 aa14.84□□□□□ -0.03
LINC01440-203ENST00000596828 HDGFP51858 240 aaKnown RBP14.84□□□□□ -0.03
LINC01440-203ENST00000596828 ZNF326Q5BKZ1 582 aaKnown RBP14.84□□□□□ -0.03
LINC01440-203ENST00000596828 RBM33Q96EV2 1170 aaKnown RBP14.84□□□□□ -0.03
LINC01440-203ENST00000596828 CHD2O14647 1828 aaKnown RBP14.84□□□□□ -0.03
LINC01440-203ENST00000596828 POLA2Q14181 598 aa14.82□□□□□ -0.04
LINC01440-203ENST00000596828 PLEKHG1Q9ULL1 1385 aa14.82□□□□□ -0.04
LINC01440-203ENST00000596828 TRPM2O94759 1503 aa14.82□□□□□ -0.04
LINC01440-203ENST00000596828 ALKQ9UM73 1620 aa14.81□□□□□ -0.04
LINC01440-203ENST00000596828 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.81□□□□□ -0.04
LINC01440-203ENST00000596828 KCNA6P17658 529 aa14.8□□□□□ -0.04
LINC01440-203ENST00000596828 PROSER2Q86WR7 435 aaPredicted RBP14.8□□□□□ -0.04
LINC01440-203ENST00000596828 NWD1Q149M9 1564 aa14.78□□□□□ -0.04
LINC01440-203ENST00000596828 ATF5Q9Y2D1 282 aaPredicted RBP14.78□□□□□ -0.04
LINC01440-203ENST00000596828 TMEM94Q12767 1356 aa14.77□□□□□ -0.04
LINC01440-203ENST00000596828 HSPA1LP34931 641 aa14.77□□□□□ -0.05
LINC01440-203ENST00000596828 NRXN3Q9Y4C0 1643 aa14.76□□□□□ -0.05
LINC01440-203ENST00000596828 ADAMTS13Q76LX8 1427 aa14.75□□□□□ -0.05
LINC01440-203ENST00000596828 TBX22Q9Y458 520 aa14.75□□□□□ -0.05
LINC01440-203ENST00000596828 DIP2AQ14689 1571 aa14.75□□□□□ -0.05
LINC01440-203ENST00000596828 NEXMIFQ5QGS0 1516 aa14.75□□□□□ -0.05
LINC01440-203ENST00000596828 SETD5Q9C0A6 1442 aa14.75□□□□□ -0.05
LINC01440-203ENST00000596828 MPHOSPH9Q99550 1183 aa14.74□□□□□ -0.05
LINC01440-203ENST00000596828 NKTRP30414 1462 aaKnown RBP14.74□□□□□ -0.05
LINC01440-203ENST00000596828 DISP3Q9P2K9 1392 aa14.73□□□□□ -0.05
LINC01440-203ENST00000596828 PPLO60437 1756 aa14.73□□□□□ -0.05
LINC01440-203ENST00000596828 C14orf37Q86TY3 774 aa14.72□□□□□ -0.05
LINC01440-203ENST00000596828 SETBP1Q9Y6X0 1596 aa14.71□□□□□ -0.05
LINC01440-203ENST00000596828 RAB3GAP2Q9H2M9 1393 aa14.71□□□□□ -0.06
LINC01440-203ENST00000596828 AMOTL2Q9Y2J4 779 aa14.7□□□□□ -0.06
LINC01440-203ENST00000596828 ROBO1Q9Y6N7 1651 aa14.7□□□□□ -0.06
LINC01440-203ENST00000596828 PTPRUQ92729 1446 aa14.69□□□□□ -0.06
LINC01440-203ENST00000596828 RGL3Q3MIN7 710 aa14.69□□□□□ -0.06
LINC01440-203ENST00000596828 MSH6P52701 1360 aa14.69□□□□□ -0.06
LINC01440-203ENST00000596828 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.69□□□□□ -0.06
LINC01440-203ENST00000596828 CCDC144AA2RUR9 1427 aa14.68□□□□□ -0.06
LINC01440-203ENST00000596828 XRN1Q8IZH2 1706 aaKnown RBP14.67□□□□□ -0.06
LINC01440-203ENST00000596828 METP08581 1390 aa14.67□□□□□ -0.06
LINC01440-203ENST00000596828 PIK3R4Q99570 1358 aa14.67□□□□□ -0.06
LINC01440-203ENST00000596828 SETD1AO15047 1707 aaKnown RBP14.66□□□□□ -0.06
LINC01440-203ENST00000596828 IFT172Q9UG01 1749 aa14.66□□□□□ -0.06
LINC01440-203ENST00000596828 VGFO15240 615 aaPredicted RBP14.65□□□□□ -0.06
LINC01440-203ENST00000596828 PHLPP1O60346 1717 aa14.63□□□□□ -0.07
LINC01440-203ENST00000596828 SLAIN2Q9P270 581 aa14.63□□□□□ -0.07
LINC01440-203ENST00000596828 MED1Q15648 1581 aaPredicted RBP14.63□□□□□ -0.07
LINC01440-203ENST00000596828 RPGRIP1LQ68CZ1 1315 aa14.63□□□□□ -0.07
LINC01440-203ENST00000596828 FKBP8Q14318 412 aa14.62□□□□□ -0.07
LINC01440-203ENST00000596828 FAM135BQ49AJ0 1406 aa14.62□□□□□ -0.07
LINC01440-203ENST00000596828 NALCNQ8IZF0 1738 aa14.61□□□□□ -0.07
LINC01440-203ENST00000596828 ATF3P18847 181 aa14.61□□□□□ -0.07
LINC01440-203ENST00000596828 ILDR2Q71H61 639 aa14.61□□□□□ -0.07
LINC01440-203ENST00000596828 ADGRF5Q8IZF2 1346 aa14.61□□□□□ -0.07
LINC01440-203ENST00000596828 ACIN1Q9UKV3 1341 aaKnown RBP14.61□□□□□ -0.07
LINC01440-203ENST00000596828 SPATA31E1Q6ZUB1 1445 aa14.6□□□□□ -0.07
LINC01440-203ENST00000596828 C19orf44Q9H6X5 657 aa14.6□□□□□ -0.07
LINC01440-203ENST00000596828 NCOA3Q9Y6Q9 1424 aa14.59□□□□□ -0.07
LINC01440-203ENST00000596828 CADPS2Q86UW7 1296 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms