RNA–Protein interactions for RNA: ENST00000596580.2

FARP1-219, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5 BASIC

Gene FARP1, Length 13,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-219ENST00000596580 GRIN2BQ13224 1484 aa9.79□□□□□ -0.84
FARP1-219ENST00000596580 ERC2O15083 957 aa9.79□□□□□ -0.84
FARP1-219ENST00000596580 CC2D2AQ9P2K1 1620 aa9.79□□□□□ -0.84
FARP1-219ENST00000596580 ARHGAP5Q13017 1502 aa9.78□□□□□ -0.84
FARP1-219ENST00000596580 CDR1P51861 262 aa9.78□□□□□ -0.84
FARP1-219ENST00000596580 SLKQ9H2G2 1235 aaPredicted RBP9.78□□□□□ -0.84
FARP1-219ENST00000596580 FAM184AQ8NB25 1140 aa9.78□□□□□ -0.84
FARP1-219ENST00000596580 ACBD3Q9H3P7 528 aa9.78□□□□□ -0.84
FARP1-219ENST00000596580 CHMP3Q9Y3E7 222 aa9.78□□□□□ -0.84
FARP1-219ENST00000596580 BECN2A8MW95 431 aa9.78□□□□□ -0.84
FARP1-219ENST00000596580 TTC5Q8N0Z6 440 aa9.78□□□□□ -0.84
FARP1-219ENST00000596580 RRP1P56182 461 aaKnown RBP9.77□□□□□ -0.84
FARP1-219ENST00000596580 TEX35Q5T0J7 233 aa9.77□□□□□ -0.84
FARP1-219ENST00000596580 PLEKHG5O94827 1062 aa9.77□□□□□ -0.84
FARP1-219ENST00000596580 MCM2P49736 904 aa9.77□□□□□ -0.85
FARP1-219ENST00000596580 G3V3G9 751 aa9.77□□□□□ -0.85
FARP1-219ENST00000596580 TRHP20396 242 aaPredicted RBP9.77□□□□□ -0.85
FARP1-219ENST00000596580 DCAF8Q5TAQ9 597 aa9.77□□□□□ -0.85
FARP1-219ENST00000596580 NAT10Q9H0A0 1025 aaKnown RBP9.77□□□□□ -0.85
FARP1-219ENST00000596580 TPRNQ4KMQ1 711 aa9.77□□□□□ -0.85
FARP1-219ENST00000596580 RDXP35241 583 aaKnown RBP9.77□□□□□ -0.85
FARP1-219ENST00000596580 ANKRD50Q9ULJ7 1429 aa9.77□□□□□ -0.85
FARP1-219ENST00000596580 GNAI1P63096 354 aa9.77□□□□□ -0.85
FARP1-219ENST00000596580 TRIM29Q14134 588 aa9.77□□□□□ -0.85
FARP1-219ENST00000596580 SAFB2Q14151 953 aaKnown RBP eCLIP9.76□□□□□ -0.85
FARP1-219ENST00000596580 TULP1O00294 542 aaPredicted RBP9.76□□□□□ -0.85
FARP1-219ENST00000596580 CCP110O43303 1012 aa9.76□□□□□ -0.85
FARP1-219ENST00000596580 INTS3Q68E01 1043 aaKnown RBP9.76□□□□□ -0.85
FARP1-219ENST00000596580 IL27Q8NEV9 243 aa9.76□□□□□ -0.85
FARP1-219ENST00000596580 PRKRIP1Q9H875 184 aaPredicted RBP9.76□□□□□ -0.85
FARP1-219ENST00000596580 HIP1O00291 1037 aa9.76□□□□□ -0.85
FARP1-219ENST00000596580 CCDC141Q6ZP82 1450 aa9.76□□□□□ -0.85
FARP1-219ENST00000596580 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.76□□□□□ -0.852e-8■■■□□ 18.4
FARP1-219ENST00000596580 ITSN2Q9NZM3 1697 aa9.76□□□□□ -0.85
FARP1-219ENST00000596580 TRDNQ13061 729 aa9.76□□□□□ -0.85
FARP1-219ENST00000596580 SMG6Q86US8 1419 aaKnown RBP9.75□□□□□ -0.85
FARP1-219ENST00000596580 TEFQ10587 303 aa9.75□□□□□ -0.85
FARP1-219ENST00000596580 TPD52L1Q16890 204 aaPredicted RBP9.75□□□□□ -0.85
FARP1-219ENST00000596580 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.75□□□□□ -0.85
FARP1-219ENST00000596580 PDCP20941 246 aa9.75□□□□□ -0.85
FARP1-219ENST00000596580 DNMBPQ6XZF7 1577 aa9.75□□□□□ -0.85
FARP1-219ENST00000596580 ST20-MTHFSA0A0A6YYL1 179 aa9.75□□□□□ -0.85
FARP1-219ENST00000596580 MLECQ14165 292 aa9.75□□□□□ -0.85
FARP1-219ENST00000596580 FRAT2O75474 233 aaPredicted RBP9.74□□□□□ -0.85
FARP1-219ENST00000596580 GTF2E1P29083 439 aaPredicted RBP9.74□□□□□ -0.85
FARP1-219ENST00000596580 LETM1O95202 739 aaPredicted RBP9.74□□□□□ -0.85
FARP1-219ENST00000596580 TIAM1Q13009 1591 aa9.74□□□□□ -0.85
FARP1-219ENST00000596580 TCEAL9Q9UHQ7 104 aa9.74□□□□□ -0.85
FARP1-219ENST00000596580 ZNF428Q96B54 188 aa9.74□□□□□ -0.85
FARP1-219ENST00000596580 MYO6Q9UM54 1294 aa9.74□□□□□ -0.85
FARP1-219ENST00000596580 NCOA2Q15596 1464 aa9.74□□□□□ -0.85
FARP1-219ENST00000596580 MAP7D2Q96T17 732 aa9.74□□□□□ -0.85
FARP1-219ENST00000596580 PANK3Q9H999 370 aa9.74□□□□□ -0.85
FARP1-219ENST00000596580 C9orf78Q9NZ63 289 aaPredicted RBP9.74□□□□□ -0.85
FARP1-219ENST00000596580 ARGLU1Q9NWB6 273 aaPredicted RBP9.74□□□□□ -0.85
FARP1-219ENST00000596580 IFT140Q96RY7 1462 aa9.73□□□□□ -0.85
FARP1-219ENST00000596580 RUNDC1Q96C34 613 aa9.73□□□□□ -0.85
FARP1-219ENST00000596580 MARCH6O60337 910 aa9.73□□□□□ -0.85
FARP1-219ENST00000596580 CPLX1O14810 134 aa9.73□□□□□ -0.85
FARP1-219ENST00000596580 SOX12O15370 315 aa9.73□□□□□ -0.85
FARP1-219ENST00000596580 SAFBQ15424 915 aaKnown RBP eCLIP9.73□□□□□ -0.855e-8■■■□□ 16.1
FARP1-219ENST00000596580 BRMS1Q9HCU9 246 aa9.73□□□□□ -0.85
FARP1-219ENST00000596580 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.73□□□□□ -0.85
FARP1-219ENST00000596580 MAP3K1Q13233 1512 aa9.73□□□□□ -0.85
FARP1-219ENST00000596580 DZIP1LQ8IYY4 767 aaKnown RBP9.72□□□□□ -0.85
FARP1-219ENST00000596580 SLC4A10Q6U841 1118 aa9.72□□□□□ -0.85
FARP1-219ENST00000596580 XBP1P17861 261 aa9.72□□□□□ -0.85
FARP1-219ENST00000596580 KIF21AQ7Z4S6 1674 aa9.72□□□□□ -0.85
FARP1-219ENST00000596580 DHX16O60231 1041 aaKnown RBP9.72□□□□□ -0.85
FARP1-219ENST00000596580 PIP4K2AP48426 406 aaPredicted RBP9.72□□□□□ -0.85
FARP1-219ENST00000596580 HNRNPMP52272 730 aaKnown RBP eCLIP9.72□□□□□ -0.857e-7■■■□□ 15.6
FARP1-219ENST00000596580 KIF14Q15058 1648 aa9.72□□□□□ -0.85
FARP1-219ENST00000596580 ERICH2A1L162 156 aa9.72□□□□□ -0.85
FARP1-219ENST00000596580 HSP90AA2PQ14568 343 aaPredicted RBP9.72□□□□□ -0.85
FARP1-219ENST00000596580 GSE1Q14687 1217 aa9.72□□□□□ -0.85
FARP1-219ENST00000596580 APBB1O00213 710 aa9.72□□□□□ -0.85
FARP1-219ENST00000596580 TXLNBQ8N3L3 684 aa9.71□□□□□ -0.85
FARP1-219ENST00000596580 DDX49Q9Y6V7 483 aaKnown RBP9.71□□□□□ -0.85
FARP1-219ENST00000596580 MBD3O95983 291 aa9.71□□□□□ -0.85
FARP1-219ENST00000596580 DIAPH1O60610 1272 aaKnown RBP9.71□□□□□ -0.85
FARP1-219ENST00000596580 PSMA5P28066 241 aa9.71□□□□□ -0.85
FARP1-219ENST00000596580 CHMP5Q9NZZ3 219 aa9.71□□□□□ -0.86
FARP1-219ENST00000596580 POLA1P09884 1462 aaPredicted RBP9.71□□□□□ -0.86
FARP1-219ENST00000596580 CFTRP13569 1480 aa9.71□□□□□ -0.86
FARP1-219ENST00000596580 FOXD1Q16676 465 aa9.71□□□□□ -0.86
FARP1-219ENST00000596580 LAMC3Q9Y6N6 1575 aa9.71□□□□□ -0.86
FARP1-219ENST00000596580 SENP3Q9H4L4 574 aaPredicted RBP9.71□□□□□ -0.86
FARP1-219ENST00000596580 IFIT2P09913 472 aaKnown RBP9.71□□□□□ -0.86
FARP1-219ENST00000596580 TRIM34Q9BYJ4 488 aa9.71□□□□□ -0.86
FARP1-219ENST00000596580 SPRYD3Q8NCJ5 442 aa9.7□□□□□ -0.86
FARP1-219ENST00000596580 SART3Q15020 963 aaKnown RBP9.7□□□□□ -0.86
FARP1-219ENST00000596580 NOM1Q5C9Z4 860 aaKnown RBP9.7□□□□□ -0.86
FARP1-219ENST00000596580 MRC2Q9UBG0 1479 aa9.7□□□□□ -0.86
FARP1-219ENST00000596580 AK7Q96M32 723 aa9.69□□□□□ -0.86
FARP1-219ENST00000596580 ZNF330Q9Y3S2 320 aaPredicted RBP9.69□□□□□ -0.86
FARP1-219ENST00000596580 CCDC73Q6ZRK6 1079 aa9.69□□□□□ -0.86
FARP1-219ENST00000596580 ERC1Q8IUD2 1116 aa9.69□□□□□ -0.86
FARP1-219ENST00000596580 G3BP1Q13283 466 aaKnown RBP eCLIP9.69□□□□□ -0.86
FARP1-219ENST00000596580 HMGN5P82970 282 aaKnown RBP9.69□□□□□ -0.86
FARP1-219ENST00000596580 GZF1Q9H116 711 aaPredicted RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms