RNA–Protein interactions for RNA: ENST00000593742.1

SOD3-202, Transcript of superoxide dismutase 3, humanhuman

TSL 5

Gene SOD3, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD3-202ENST00000593742 KDM5AP29375 1690 aaKnown RBP18.15■□□□□ 0.5
SOD3-202ENST00000593742 STRCP1A6NGW2 1772 aa18.14■□□□□ 0.5
SOD3-202ENST00000593742 MYO5BQ9ULV0 1848 aa18.14■□□□□ 0.49
SOD3-202ENST00000593742 PPP1R15AO75807 674 aaPredicted RBP18.12■□□□□ 0.49
SOD3-202ENST00000593742 SLC26A8Q96RN1 970 aa18.12■□□□□ 0.49
SOD3-202ENST00000593742 NAIPQ13075 1403 aa18.1■□□□□ 0.49
SOD3-202ENST00000593742 TOM1O60784 492 aa18.1■□□□□ 0.49
SOD3-202ENST00000593742 NUTM2DQ5VT03 806 aaPredicted RBP18.1■□□□□ 0.49
SOD3-202ENST00000593742 LRRC7Q96NW7 1537 aa18.09■□□□□ 0.49
SOD3-202ENST00000593742 RIMS2Q9UQ26 1411 aa18.09■□□□□ 0.49
SOD3-202ENST00000593742 TMEM131LA2VDJ0 1609 aa18.09■□□□□ 0.49
SOD3-202ENST00000593742 TRIM52Q96A61 297 aa18.08■□□□□ 0.48
SOD3-202ENST00000593742 ZFYVE9O95405 1425 aa18.06■□□□□ 0.48
SOD3-202ENST00000593742 SPHKAPQ2M3C7 1700 aa18.05■□□□□ 0.48
SOD3-202ENST00000593742 HFM1A2PYH4 1435 aa18.05■□□□□ 0.48
SOD3-202ENST00000593742 HDGFP51858 240 aaKnown RBP18.04■□□□□ 0.48
SOD3-202ENST00000593742 RBM33Q96EV2 1170 aaKnown RBP18.03■□□□□ 0.48
SOD3-202ENST00000593742 DISP3Q9P2K9 1392 aa18.03■□□□□ 0.48
SOD3-202ENST00000593742 PLEKHG1Q9ULL1 1385 aa18.03■□□□□ 0.48
SOD3-202ENST00000593742 HSPA1LP34931 641 aa18.02■□□□□ 0.48
SOD3-202ENST00000593742 ZNF326Q5BKZ1 582 aaKnown RBP18.02■□□□□ 0.48
SOD3-202ENST00000593742 KCNA6P17658 529 aa18.01■□□□□ 0.47
SOD3-202ENST00000593742 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.01■□□□□ 0.47
SOD3-202ENST00000593742 PROSER2Q86WR7 435 aaPredicted RBP18■□□□□ 0.47
SOD3-202ENST00000593742 CNKSR2Q8WXI2 1034 aa18■□□□□ 0.47
SOD3-202ENST00000593742 ALKQ9UM73 1620 aa18■□□□□ 0.47
SOD3-202ENST00000593742 TMEM94Q12767 1356 aa18■□□□□ 0.47
SOD3-202ENST00000593742 XIRP1Q702N8 1843 aaKnown RBP17.99■□□□□ 0.47
SOD3-202ENST00000593742 SLC4A1APQ9BWU0 796 aaKnown RBP17.98■□□□□ 0.47
SOD3-202ENST00000593742 CLTCL1P53675 1640 aa17.97■□□□□ 0.47
SOD3-202ENST00000593742 TRPM2O94759 1503 aa17.96■□□□□ 0.47
SOD3-202ENST00000593742 NWD1Q149M9 1564 aa17.96■□□□□ 0.46
SOD3-202ENST00000593742 NKTRP30414 1462 aaKnown RBP17.95■□□□□ 0.46
SOD3-202ENST00000593742 ADAMTS13Q76LX8 1427 aa17.94■□□□□ 0.46
SOD3-202ENST00000593742 KCNA4P22459 653 aa17.93■□□□□ 0.46
SOD3-202ENST00000593742 TBX22Q9Y458 520 aa17.92■□□□□ 0.46
SOD3-202ENST00000593742 CHD2O14647 1828 aaKnown RBP17.92■□□□□ 0.46
SOD3-202ENST00000593742 KIF1BO60333 1816 aa17.91■□□□□ 0.46
SOD3-202ENST00000593742 C14orf37Q86TY3 774 aa17.91■□□□□ 0.46
SOD3-202ENST00000593742 DIP2AQ14689 1571 aa17.91■□□□□ 0.46
SOD3-202ENST00000593742 MSH6P52701 1360 aa17.9■□□□□ 0.46
SOD3-202ENST00000593742 NEXMIFQ5QGS0 1516 aa17.88■□□□□ 0.45
SOD3-202ENST00000593742 NRXN3Q9Y4C0 1643 aa17.87■□□□□ 0.45
SOD3-202ENST00000593742 AMOTL2Q9Y2J4 779 aa17.86■□□□□ 0.45
SOD3-202ENST00000593742 NCBP3Q53F19 620 aaKnown RBP17.85■□□□□ 0.45
SOD3-202ENST00000593742 ILDR2Q71H61 639 aa17.85■□□□□ 0.45
SOD3-202ENST00000593742 MPHOSPH9Q99550 1183 aa17.85■□□□□ 0.45
SOD3-202ENST00000593742 SETBP1Q9Y6X0 1596 aa17.85■□□□□ 0.45
SOD3-202ENST00000593742 PTPRUQ92729 1446 aa17.84■□□□□ 0.45
SOD3-202ENST00000593742 PIK3R4Q99570 1358 aa17.84■□□□□ 0.45
SOD3-202ENST00000593742 MED1Q15648 1581 aaPredicted RBP17.83■□□□□ 0.45
SOD3-202ENST00000593742 SETD5Q9C0A6 1442 aa17.83■□□□□ 0.45
SOD3-202ENST00000593742 ROBO1Q9Y6N7 1651 aa17.83■□□□□ 0.44
SOD3-202ENST00000593742 CCDC144AA2RUR9 1427 aa17.82■□□□□ 0.44
SOD3-202ENST00000593742 METP08581 1390 aa17.82■□□□□ 0.44
SOD3-202ENST00000593742 FAM135BQ49AJ0 1406 aa17.81■□□□□ 0.44
SOD3-202ENST00000593742 SLAIN2Q9P270 581 aa17.8■□□□□ 0.44
SOD3-202ENST00000593742 VGFO15240 615 aaPredicted RBP17.79■□□□□ 0.44
SOD3-202ENST00000593742 ATF3P18847 181 aa17.79■□□□□ 0.44
SOD3-202ENST00000593742 RGL3Q3MIN7 710 aa17.79■□□□□ 0.44
SOD3-202ENST00000593742 RAB3GAP2Q9H2M9 1393 aa17.79■□□□□ 0.44
SOD3-202ENST00000593742 XRN1Q8IZH2 1706 aaKnown RBP17.78■□□□□ 0.44
SOD3-202ENST00000593742 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.77■□□□□ 0.44
SOD3-202ENST00000593742 PPLO60437 1756 aa17.76■□□□□ 0.43
SOD3-202ENST00000593742 RPGRIP1LQ68CZ1 1315 aa17.76■□□□□ 0.43
SOD3-202ENST00000593742 NCOA3Q9Y6Q9 1424 aa17.76■□□□□ 0.43
SOD3-202ENST00000593742 C19orf44Q9H6X5 657 aa17.76■□□□□ 0.43
SOD3-202ENST00000593742 NPM3O75607 178 aaKnown RBP17.75■□□□□ 0.43
SOD3-202ENST00000593742 CADPS2Q86UW7 1296 aa17.75■□□□□ 0.43
SOD3-202ENST00000593742 PHLPP1O60346 1717 aa17.73■□□□□ 0.43
SOD3-202ENST00000593742 HOXD11P31277 338 aaPredicted RBP17.72■□□□□ 0.43
SOD3-202ENST00000593742 ADGRF5Q8IZF2 1346 aa17.72■□□□□ 0.43
SOD3-202ENST00000593742 SETD1AO15047 1707 aaKnown RBP17.71■□□□□ 0.43
SOD3-202ENST00000593742 SPATA31E1Q6ZUB1 1445 aa17.71■□□□□ 0.43
SOD3-202ENST00000593742 ACIN1Q9UKV3 1341 aaKnown RBP17.71■□□□□ 0.42
SOD3-202ENST00000593742 RNF216Q9NWF9 866 aaPredicted RBP17.7■□□□□ 0.42
SOD3-202ENST00000593742 ROBO2Q9HCK4 1378 aa17.68■□□□□ 0.42
SOD3-202ENST00000593742 ADGRL3Q9HAR2 1447 aa17.68■□□□□ 0.42
SOD3-202ENST00000593742 NALCNQ8IZF0 1738 aa17.67■□□□□ 0.42
SOD3-202ENST00000593742 DCCP43146 1447 aa17.67■□□□□ 0.42
SOD3-202ENST00000593742 STK26Q9P289 416 aa17.67■□□□□ 0.42
SOD3-202ENST00000593742 IFT172Q9UG01 1749 aa17.67■□□□□ 0.42
SOD3-202ENST00000593742 ANKRD30BQ9BXX2 1392 aa17.66■□□□□ 0.42
SOD3-202ENST00000593742 PTCH1Q13635 1447 aa17.66■□□□□ 0.42
SOD3-202ENST00000593742 BRINP3Q76B58 766 aa17.66■□□□□ 0.42
SOD3-202ENST00000593742 MST1RQ04912 1400 aa17.65■□□□□ 0.42
SOD3-202ENST00000593742 SOCS7O14512 581 aa17.65■□□□□ 0.42
SOD3-202ENST00000593742 COL16A1Q07092 1604 aaPredicted RBP17.65■□□□□ 0.42
SOD3-202ENST00000593742 JCADQ9P266 1359 aa17.64■□□□□ 0.41
SOD3-202ENST00000593742 ASXL1Q8IXJ9 1541 aa17.63■□□□□ 0.41
SOD3-202ENST00000593742 TMEM132EQ6IEE7 984 aa17.63■□□□□ 0.41
SOD3-202ENST00000593742 AHDC1Q5TGY3 1603 aaPredicted RBP17.62■□□□□ 0.41
SOD3-202ENST00000593742 PIK3C2GO75747 1445 aa17.62■□□□□ 0.41
SOD3-202ENST00000593742 DDX17Q92841 729 aaKnown RBP17.61■□□□□ 0.41
SOD3-202ENST00000593742 WAPLQ7Z5K2 1190 aa17.59■□□□□ 0.41
SOD3-202ENST00000593742 MEX3CQ5U5Q3 659 aaKnown RBP17.58■□□□□ 0.4
SOD3-202ENST00000593742 RGS17Q9UGC6 210 aaPredicted RBP17.58■□□□□ 0.4
SOD3-202ENST00000593742 C1orf167Q5SNV9 1468 aa17.57■□□□□ 0.4
SOD3-202ENST00000593742 PRAG1Q86YV5 1406 aa17.57■□□□□ 0.4
SOD3-202ENST00000593742 LRPPRCP42704 1394 aaKnown RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms