RNA–Protein interactions for RNA: ENST00000593160.2

CACNA1A-212, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,651 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-212ENST00000593160 DDX10Q13206 875 aaKnown RBP17.9■□□□□ 0.46
CACNA1A-212ENST00000593160 IDI1Q13907 227 aa17.9■□□□□ 0.46
CACNA1A-212ENST00000593160 MIER1Q8N108 512 aa17.9■□□□□ 0.46
CACNA1A-212ENST00000593160 FER1L4A9Z1Z3 1794 aa17.9■□□□□ 0.46
CACNA1A-212ENST00000593160 C11orf95C9JLR9 678 aaPredicted RBP17.9■□□□□ 0.46
CACNA1A-212ENST00000593160 ARID4BQ4LE39 1312 aaPredicted RBP17.89■□□□□ 0.46
CACNA1A-212ENST00000593160 PIK3C2GO75747 1445 aa17.89■□□□□ 0.45
CACNA1A-212ENST00000593160 RPGRIP1LQ68CZ1 1315 aa17.89■□□□□ 0.45
CACNA1A-212ENST00000593160 ADGRF5Q8IZF2 1346 aa17.89■□□□□ 0.45
CACNA1A-212ENST00000593160 ZMYM3Q14202 1370 aa17.89■□□□□ 0.45
CACNA1A-212ENST00000593160 CHGAP10645 457 aaKnown RBP17.88■□□□□ 0.45
CACNA1A-212ENST00000593160 AEBP2Q6ZN18 517 aaPredicted RBP17.88■□□□□ 0.45
CACNA1A-212ENST00000593160 SETBP1Q9Y6X0 1596 aa17.87■□□□□ 0.45
CACNA1A-212ENST00000593160 C3P01024 1663 aa17.86■□□□□ 0.45
CACNA1A-212ENST00000593160 KIF7Q2M1P5 1343 aa17.86■□□□□ 0.45
CACNA1A-212ENST00000593160 SCAF11Q99590 1463 aaKnown RBP17.84■□□□□ 0.45
CACNA1A-212ENST00000593160 ZFYVE9O95405 1425 aa17.84■□□□□ 0.45
CACNA1A-212ENST00000593160 ST20-MTHFSA0A0A6YYL1 179 aa17.84■□□□□ 0.45
CACNA1A-212ENST00000593160 KDM5AP29375 1690 aaKnown RBP17.84■□□□□ 0.45
CACNA1A-212ENST00000593160 ESF1Q9H501 851 aaKnown RBP17.83■□□□□ 0.45
CACNA1A-212ENST00000593160 ADGRB1O14514 1584 aa17.83■□□□□ 0.45
CACNA1A-212ENST00000593160 A2ML1A8K2U0 1454 aa17.83■□□□□ 0.45
CACNA1A-212ENST00000593160 MYO3AQ8NEV4 1616 aa17.81■□□□□ 0.44
CACNA1A-212ENST00000593160 TNRQ92752 1358 aa17.8■□□□□ 0.44
CACNA1A-212ENST00000593160 CFAP70Q5T0N1 1121 aa17.8■□□□□ 0.44
CACNA1A-212ENST00000593160 UBR1Q8IWV7 1749 aa17.79■□□□□ 0.44
CACNA1A-212ENST00000593160 TESK2Q96S53 571 aa17.77■□□□□ 0.44
CACNA1A-212ENST00000593160 ASXL1Q8IXJ9 1541 aa17.77■□□□□ 0.43
CACNA1A-212ENST00000593160 VGFO15240 615 aaPredicted RBP17.77■□□□□ 0.43
CACNA1A-212ENST00000593160 C14orf93Q9H972 538 aaKnown RBP17.77■□□□□ 0.43
CACNA1A-212ENST00000593160 ADAMTSL3P82987 1691 aa17.76■□□□□ 0.43
CACNA1A-212ENST00000593160 RIMS1Q86UR5 1692 aaKnown RBP17.75■□□□□ 0.43
CACNA1A-212ENST00000593160 NLRP1Q9C000 1473 aa17.75■□□□□ 0.43
CACNA1A-212ENST00000593160 EIF3AQ14152 1382 aaKnown RBP17.74■□□□□ 0.43
CACNA1A-212ENST00000593160 SETD1AO15047 1707 aaKnown RBP17.74■□□□□ 0.43
CACNA1A-212ENST00000593160 DISP3Q9P2K9 1392 aa17.74■□□□□ 0.43
CACNA1A-212ENST00000593160 ARHGEF28Q8N1W1 1705 aaKnown RBP17.73■□□□□ 0.43
CACNA1A-212ENST00000593160 NUTM2DQ5VT03 806 aaPredicted RBP17.73■□□□□ 0.43
CACNA1A-212ENST00000593160 RIMS2Q9UQ26 1411 aa17.73■□□□□ 0.43
CACNA1A-212ENST00000593160 NRXN3Q9Y4C0 1643 aa17.72■□□□□ 0.43
CACNA1A-212ENST00000593160 ALKQ9UM73 1620 aa17.71■□□□□ 0.43
CACNA1A-212ENST00000593160 QRICH2Q9H0J4 1663 aa17.71■□□□□ 0.43
CACNA1A-212ENST00000593160 STAG3Q9UJ98 1225 aa17.71■□□□□ 0.42
CACNA1A-212ENST00000593160 CEBPAP49715 358 aaPredicted RBP17.7■□□□□ 0.42
CACNA1A-212ENST00000593160 SBNO2Q9Y2G9 1366 aa17.68■□□□□ 0.42
CACNA1A-212ENST00000593160 ANP32CO43423 234 aa17.67■□□□□ 0.42
CACNA1A-212ENST00000593160 PTPRMP28827 1452 aa17.67■□□□□ 0.42
CACNA1A-212ENST00000593160 MYOM1P52179 1685 aa17.67■□□□□ 0.42
CACNA1A-212ENST00000593160 TMF1P82094 1093 aa17.66■□□□□ 0.42
CACNA1A-212ENST00000593160 TMEM2Q9UHN6 1383 aa17.65■□□□□ 0.42
CACNA1A-212ENST00000593160 TMEM132EQ6IEE7 984 aa17.65■□□□□ 0.42
CACNA1A-212ENST00000593160 POLR3GLQ9BT43 218 aa17.65■□□□□ 0.42
CACNA1A-212ENST00000593160 SLIT1O75093 1534 aa17.63■□□□□ 0.41
CACNA1A-212ENST00000593160 ARHGAP23Q9P227 1491 aa17.63■□□□□ 0.41
CACNA1A-212ENST00000593160 ZNF142P52746 1687 aaPredicted RBP17.63■□□□□ 0.41
CACNA1A-212ENST00000593160 CENPJQ9HC77 1338 aaPredicted RBP17.62■□□□□ 0.41
CACNA1A-212ENST00000593160 CEP170BQ9Y4F5 1589 aaPredicted RBP17.62■□□□□ 0.41
CACNA1A-212ENST00000593160 CCER2I3L3R5 266 aa17.61■□□□□ 0.41
CACNA1A-212ENST00000593160 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.61■□□□□ 0.41
CACNA1A-212ENST00000593160 TRAK1Q9UPV9 953 aa17.61■□□□□ 0.41
CACNA1A-212ENST00000593160 YTHDC2Q9H6S0 1430 aaKnown RBP17.61■□□□□ 0.41
CACNA1A-212ENST00000593160 KNDC1Q76NI1 1749 aa17.6■□□□□ 0.41
CACNA1A-212ENST00000593160 DLC1Q96QB1 1528 aa17.6■□□□□ 0.41
CACNA1A-212ENST00000593160 TULP4Q9NRJ4 1543 aa17.58■□□□□ 0.4
CACNA1A-212ENST00000593160 SLC24A1O60721 1099 aa17.58■□□□□ 0.4
CACNA1A-212ENST00000593160 PRKRIP1Q9H875 184 aaPredicted RBP17.58■□□□□ 0.4
CACNA1A-212ENST00000593160 CDCA8Q53HL2 280 aa17.57■□□□□ 0.4
CACNA1A-212ENST00000593160 SENP3Q9H4L4 574 aaPredicted RBP17.57■□□□□ 0.4
CACNA1A-212ENST00000593160 PLEKHG1Q9ULL1 1385 aa17.56■□□□□ 0.4
CACNA1A-212ENST00000593160 PLPPR3Q6T4P5 718 aa17.56■□□□□ 0.4
CACNA1A-212ENST00000593160 ADAMTS13Q76LX8 1427 aa17.56■□□□□ 0.4
CACNA1A-212ENST00000593160 HDGFP51858 240 aaKnown RBP17.55■□□□□ 0.4
CACNA1A-212ENST00000593160 LRPPRCP42704 1394 aaKnown RBP17.55■□□□□ 0.4
CACNA1A-212ENST00000593160 MED14O60244 1454 aa17.54■□□□□ 0.4
CACNA1A-212ENST00000593160 CPS1P31327 1500 aa17.53■□□□□ 0.4
CACNA1A-212ENST00000593160 METP08581 1390 aa17.53■□□□□ 0.4
CACNA1A-212ENST00000593160 LTKP29376 864 aa17.52■□□□□ 0.4
CACNA1A-212ENST00000593160 YTHDC1Q96MU7 727 aaKnown RBP17.52■□□□□ 0.4
CACNA1A-212ENST00000593160 TECPR2O15040 1411 aa17.52■□□□□ 0.39
CACNA1A-212ENST00000593160 PER1O15534 1290 aaPredicted RBP17.52■□□□□ 0.39
CACNA1A-212ENST00000593160 ABCC11Q96J66 1382 aa17.51■□□□□ 0.39
CACNA1A-212ENST00000593160 STK26Q9P289 416 aa17.51■□□□□ 0.39
CACNA1A-212ENST00000593160 DIP2AQ14689 1571 aa17.51■□□□□ 0.39
CACNA1A-212ENST00000593160 SETD1BQ9UPS6 1966 aaKnown RBP17.5■□□□□ 0.39
CACNA1A-212ENST00000593160 THEMISQ8N1K5 641 aaPredicted RBP17.49■□□□□ 0.39
CACNA1A-212ENST00000593160 PANK3Q9H999 370 aa17.49■□□□□ 0.39
CACNA1A-212ENST00000593160 KTN1Q86UP2 1357 aaKnown RBP17.48■□□□□ 0.39
CACNA1A-212ENST00000593160 TXNDC2Q86VQ3 553 aa17.48■□□□□ 0.39
CACNA1A-212ENST00000593160 PRAM1Q96QH2 718 aa17.48■□□□□ 0.39
CACNA1A-212ENST00000593160 PARD3Q8TEW0 1356 aa17.47■□□□□ 0.39
CACNA1A-212ENST00000593160 EID1Q9Y6B2 187 aa17.47■□□□□ 0.39
CACNA1A-212ENST00000593160 PUS7Q96PZ0 661 aaKnown RBP17.46■□□□□ 0.39
CACNA1A-212ENST00000593160 FAM135BQ49AJ0 1406 aa17.46■□□□□ 0.38
CACNA1A-212ENST00000593160 EVC2Q86UK5 1308 aa17.45■□□□□ 0.38
CACNA1A-212ENST00000593160 PLEKHH1Q9ULM0 1364 aa17.45■□□□□ 0.38
CACNA1A-212ENST00000593160 CCDC184Q52MB2 194 aa17.45■□□□□ 0.38
CACNA1A-212ENST00000593160 SAFB2Q14151 953 aaKnown RBP eCLIP17.44■□□□□ 0.38
CACNA1A-212ENST00000593160 XRN1Q8IZH2 1706 aaKnown RBP17.44■□□□□ 0.38
CACNA1A-212ENST00000593160 PTPRUQ92729 1446 aa17.43■□□□□ 0.38
CACNA1A-212ENST00000593160 USP32Q8NFA0 1604 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms