RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 NRXN1Q9ULB1 1477 aa19.49■□□□□ 0.71
RANBP3-229ENST00000592771 NOS1P29475 1434 aa19.48■□□□□ 0.71
RANBP3-229ENST00000592771 ARHGAP31Q2M1Z3 1444 aa19.48■□□□□ 0.71
RANBP3-229ENST00000592771 SIGLEC1Q9BZZ2 1709 aa19.47■□□□□ 0.71
RANBP3-229ENST00000592771 REREQ9P2R6 1566 aa19.46■□□□□ 0.71
RANBP3-229ENST00000592771 SCAF11Q99590 1463 aaKnown RBP19.46■□□□□ 0.71
RANBP3-229ENST00000592771 CCDC184Q52MB2 194 aa19.46■□□□□ 0.71
RANBP3-229ENST00000592771 POLR3GLQ9BT43 218 aa19.46■□□□□ 0.71
RANBP3-229ENST00000592771 WASHC2CQ9Y4E1 1318 aa19.46■□□□□ 0.71
RANBP3-229ENST00000592771 PIK3C2BO00750 1634 aa19.46■□□□□ 0.71
RANBP3-229ENST00000592771 CFAP65Q6ZU64 1925 aaKnown RBP19.45■□□□□ 0.7
RANBP3-229ENST00000592771 DISP3Q9P2K9 1392 aa19.44■□□□□ 0.7
RANBP3-229ENST00000592771 ANP32EQ9BTT0 268 aa19.43■□□□□ 0.7
RANBP3-229ENST00000592771 PPLO60437 1756 aa19.43■□□□□ 0.7
RANBP3-229ENST00000592771 SYNMO15061 1565 aa19.43■□□□□ 0.7
RANBP3-229ENST00000592771 KTN1Q86UP2 1357 aaKnown RBP19.42■□□□□ 0.7
RANBP3-229ENST00000592771 MRS2Q9HD23 443 aa19.41■□□□□ 0.7
RANBP3-229ENST00000592771 AGLP35573 1532 aa19.4■□□□□ 0.7
RANBP3-229ENST00000592771 ADGRF5Q8IZF2 1346 aa19.4■□□□□ 0.7
RANBP3-229ENST00000592771 ZBED9Q6R2W3 1325 aa19.39■□□□□ 0.7
RANBP3-229ENST00000592771 TMF1P82094 1093 aa19.39■□□□□ 0.7
RANBP3-229ENST00000592771 SETBP1Q9Y6X0 1596 aa19.38■□□□□ 0.69
RANBP3-229ENST00000592771 RBM19Q9Y4C8 960 aaKnown RBP19.38■□□□□ 0.69
RANBP3-229ENST00000592771 RPGRIP1LQ68CZ1 1315 aa19.38■□□□□ 0.69
RANBP3-229ENST00000592771 EIF3AQ14152 1382 aaKnown RBP19.36■□□□□ 0.69
RANBP3-229ENST00000592771 PIK3C2GO75747 1445 aa19.35■□□□□ 0.69
RANBP3-229ENST00000592771 PREX1Q8TCU6 1659 aa19.35■□□□□ 0.69
RANBP3-229ENST00000592771 MYO3AQ8NEV4 1616 aa19.35■□□□□ 0.69
RANBP3-229ENST00000592771 PER1O15534 1290 aaPredicted RBP19.35■□□□□ 0.69
RANBP3-229ENST00000592771 RALBP1Q15311 655 aa19.34■□□□□ 0.69
RANBP3-229ENST00000592771 CFAP70Q5T0N1 1121 aa19.34■□□□□ 0.69
RANBP3-229ENST00000592771 PARD3Q8TEW0 1356 aa19.32■□□□□ 0.68
RANBP3-229ENST00000592771 NEXMIFQ5QGS0 1516 aa19.32■□□□□ 0.68
RANBP3-229ENST00000592771 PPP4R2Q9NY27 417 aa19.32■□□□□ 0.68
RANBP3-229ENST00000592771 ARHGEF40Q8TER5 1519 aa19.32■□□□□ 0.68
RANBP3-229ENST00000592771 PPP6R1Q9UPN7 881 aa19.31■□□□□ 0.68
RANBP3-229ENST00000592771 ADGRB1O14514 1584 aa19.3■□□□□ 0.68
RANBP3-229ENST00000592771 MYBBP1AQ9BQG0 1328 aaKnown RBP19.3■□□□□ 0.68
RANBP3-229ENST00000592771 BRD4O60885 1362 aaPredicted RBP19.3■□□□□ 0.68
RANBP3-229ENST00000592771 CHGAP10645 457 aaKnown RBP19.29■□□□□ 0.68
RANBP3-229ENST00000592771 CDCA8Q53HL2 280 aa19.29■□□□□ 0.68
RANBP3-229ENST00000592771 FAM9BQ8IZU0 186 aa19.29■□□□□ 0.68
RANBP3-229ENST00000592771 SLC52A1Q9NWF4 448 aa19.29■□□□□ 0.68
RANBP3-229ENST00000592771 SBNO2Q9Y2G9 1366 aa19.29■□□□□ 0.68
RANBP3-229ENST00000592771 C14orf93Q9H972 538 aaKnown RBP19.29■□□□□ 0.68
RANBP3-229ENST00000592771 MYOM1P52179 1685 aa19.28■□□□□ 0.68
RANBP3-229ENST00000592771 SLC24A1O60721 1099 aa19.28■□□□□ 0.68
RANBP3-229ENST00000592771 ZFYVE9O95405 1425 aa19.28■□□□□ 0.68
RANBP3-229ENST00000592771 TMEM131LA2VDJ0 1609 aa19.27■□□□□ 0.68
RANBP3-229ENST00000592771 KDM5AP29375 1690 aaKnown RBP19.27■□□□□ 0.68
RANBP3-229ENST00000592771 ERVK-7P63135 1459 aa19.27■□□□□ 0.67
RANBP3-229ENST00000592771 IDI1Q13907 227 aa19.26■□□□□ 0.67
RANBP3-229ENST00000592771 PANK3Q9H999 370 aa19.26■□□□□ 0.67
RANBP3-229ENST00000592771 MYO5BQ9ULV0 1848 aa19.25■□□□□ 0.67
RANBP3-229ENST00000592771 FANCIQ9NVI1 1328 aa19.25■□□□□ 0.67
RANBP3-229ENST00000592771 PNISRQ8TF01 805 aaKnown RBP19.25■□□□□ 0.67
RANBP3-229ENST00000592771 LRPPRCP42704 1394 aaKnown RBP19.24■□□□□ 0.67
RANBP3-229ENST00000592771 CLTCQ00610 1675 aaKnown RBP19.23■□□□□ 0.67
RANBP3-229ENST00000592771 SMG6Q86US8 1419 aaKnown RBP19.22■□□□□ 0.67
RANBP3-229ENST00000592771 VGFO15240 615 aaPredicted RBP19.22■□□□□ 0.67
RANBP3-229ENST00000592771 CNGB1Q14028 1251 aaPredicted RBP19.22■□□□□ 0.67
RANBP3-229ENST00000592771 TMC1Q8TDI8 760 aa19.21■□□□□ 0.67
RANBP3-229ENST00000592771 NLRP13Q86W25 1043 aa19.21■□□□□ 0.67
RANBP3-229ENST00000592771 SPATA31D1Q6ZQQ2 1576 aa19.21■□□□□ 0.67
RANBP3-229ENST00000592771 QRICH2Q9H0J4 1663 aa19.19■□□□□ 0.66
RANBP3-229ENST00000592771 CENPJQ9HC77 1338 aaPredicted RBP19.18■□□□□ 0.66
RANBP3-229ENST00000592771 NPC1L1Q9UHC9 1359 aa19.17■□□□□ 0.66
RANBP3-229ENST00000592771 ARHGEF28Q8N1W1 1705 aaKnown RBP19.17■□□□□ 0.66
RANBP3-229ENST00000592771 FBXO31Q5XUX0 539 aaPredicted RBP19.17■□□□□ 0.66
RANBP3-229ENST00000592771 ASXL1Q8IXJ9 1541 aa19.16■□□□□ 0.66
RANBP3-229ENST00000592771 IRX6P78412 446 aaPredicted RBP19.15■□□□□ 0.66
RANBP3-229ENST00000592771 AMER1Q5JTC6 1135 aaPredicted RBP19.15■□□□□ 0.66
RANBP3-229ENST00000592771 RNF123Q5XPI4 1314 aa19.14■□□□□ 0.65
RANBP3-229ENST00000592771 INSRP06213 1382 aa19.14■□□□□ 0.65
RANBP3-229ENST00000592771 CC2D1BQ5T0F9 858 aaKnown RBP19.13■□□□□ 0.65
RANBP3-229ENST00000592771 NUDCQ9Y266 331 aa19.13■□□□□ 0.65
RANBP3-229ENST00000592771 KNSTRNQ9Y448 316 aa19.13■□□□□ 0.65
RANBP3-229ENST00000592771 TMEM132EQ6IEE7 984 aa19.13■□□□□ 0.65
RANBP3-229ENST00000592771 TRAK1Q9UPV9 953 aa19.13■□□□□ 0.65
RANBP3-229ENST00000592771 A2ML1A8K2U0 1454 aa19.1■□□□□ 0.65
RANBP3-229ENST00000592771 MLECQ14165 292 aa19.1■□□□□ 0.65
RANBP3-229ENST00000592771 NUTM2DQ5VT03 806 aaPredicted RBP19.1■□□□□ 0.65
RANBP3-229ENST00000592771 PUS7Q96PZ0 661 aaKnown RBP19.09■□□□□ 0.65
RANBP3-229ENST00000592771 TULP4Q9NRJ4 1543 aa19.07■□□□□ 0.64
RANBP3-229ENST00000592771 ALKQ9UM73 1620 aa19.06■□□□□ 0.64
RANBP3-229ENST00000592771 ZMYM3Q14202 1370 aa19.05■□□□□ 0.64
RANBP3-229ENST00000592771 BLMP54132 1417 aaPredicted RBP19.05■□□□□ 0.64
RANBP3-229ENST00000592771 PTPRMP28827 1452 aa19.04■□□□□ 0.64
RANBP3-229ENST00000592771 PPP2R1AP30153 589 aa19.04■□□□□ 0.64
RANBP3-229ENST00000592771 CARD14Q9BXL6 1004 aa19.04■□□□□ 0.64
RANBP3-229ENST00000592771 SETD1AO15047 1707 aaKnown RBP19.03■□□□□ 0.64
RANBP3-229ENST00000592771 USP32Q8NFA0 1604 aa19.03■□□□□ 0.64
RANBP3-229ENST00000592771 YTHDC2Q9H6S0 1430 aaKnown RBP19.02■□□□□ 0.64
RANBP3-229ENST00000592771 RIMS2Q9UQ26 1411 aa19.02■□□□□ 0.64
RANBP3-229ENST00000592771 MSH5O43196 834 aa19.02■□□□□ 0.64
RANBP3-229ENST00000592771 B4GALNT3Q6L9W6 998 aa19.01■□□□□ 0.63
RANBP3-229ENST00000592771 STAG3Q9UJ98 1225 aa19.01■□□□□ 0.63
RANBP3-229ENST00000592771 EVC2Q86UK5 1308 aa19.01■□□□□ 0.63
RANBP3-229ENST00000592771 DLC1Q96QB1 1528 aa18.98■□□□□ 0.63
RANBP3-229ENST00000592771 ESF1Q9H501 851 aaKnown RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms