RNA–Protein interactions for RNA: ENST00000592578.5

PSME3-215, Transcript of proteasome activator subunit 3, humanhuman

TSL 4

Gene PSME3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-215ENST00000592578 FGD6Q6ZV73 1430 aa22.11■■□□□ 1.13
PSME3-215ENST00000592578 PTPN23Q9H3S7 1636 aa22.1■■□□□ 1.13
PSME3-215ENST00000592578 TRIM52Q96A61 297 aa22.1■■□□□ 1.13
PSME3-215ENST00000592578 SLC52A1Q9NWF4 448 aa22.1■■□□□ 1.13
PSME3-215ENST00000592578 ABCC5O15440 1437 aa22.09■■□□□ 1.13
PSME3-215ENST00000592578 C14orf37Q86TY3 774 aa22.09■■□□□ 1.13
PSME3-215ENST00000592578 PPP1R15AO75807 674 aaPredicted RBP22.07■■□□□ 1.12
PSME3-215ENST00000592578 RXRBP28702 533 aa22.07■■□□□ 1.12
PSME3-215ENST00000592578 NCOA3Q9Y6Q9 1424 aa22.06■■□□□ 1.12
PSME3-215ENST00000592578 ADGRB3O60242 1522 aa22.06■■□□□ 1.12
PSME3-215ENST00000592578 DAPK1P53355 1430 aa22.06■■□□□ 1.12
PSME3-215ENST00000592578 LMTK2Q8IWU2 1503 aa22.05■■□□□ 1.12
PSME3-215ENST00000592578 CADPS2Q86UW7 1296 aa22.04■■□□□ 1.12
PSME3-215ENST00000592578 COL16A1Q07092 1604 aaPredicted RBP22.04■■□□□ 1.12
PSME3-215ENST00000592578 ATF3P18847 181 aa22.03■■□□□ 1.12
PSME3-215ENST00000592578 CROCC2H7BZ55 1655 aa22.02■■□□□ 1.12
PSME3-215ENST00000592578 CHD2O14647 1828 aaKnown RBP22.02■■□□□ 1.12
PSME3-215ENST00000592578 PLEKHG1Q9ULL1 1385 aa22.01■■□□□ 1.11
PSME3-215ENST00000592578 ANKRD30AQ9BXX3 1397 aa22■■□□□ 1.11
PSME3-215ENST00000592578 NOS1P29475 1434 aa22■■□□□ 1.11
PSME3-215ENST00000592578 C19orf44Q9H6X5 657 aa21.99■■□□□ 1.11
PSME3-215ENST00000592578 LRP6O75581 1613 aa21.98■■□□□ 1.11
PSME3-215ENST00000592578 SHPRHQ149N8 1683 aa21.98■■□□□ 1.11
PSME3-215ENST00000592578 CDK12Q9NYV4 1490 aaPredicted RBP21.98■■□□□ 1.11
PSME3-215ENST00000592578 FAM50AQ14320 339 aaKnown RBP21.98■■□□□ 1.11
PSME3-215ENST00000592578 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.98■■□□□ 1.11
PSME3-215ENST00000592578 CHIC2Q9UKJ5 165 aa21.98■■□□□ 1.11
PSME3-215ENST00000592578 TBX22Q9Y458 520 aa21.98■■□□□ 1.11
PSME3-215ENST00000592578 AHDC1Q5TGY3 1603 aaPredicted RBP21.96■■□□□ 1.11
PSME3-215ENST00000592578 FOXD1Q16676 465 aa21.96■■□□□ 1.11
PSME3-215ENST00000592578 RPRD2Q5VT52 1461 aaKnown RBP21.95■■□□□ 1.1
PSME3-215ENST00000592578 NUTM2BA6NNL0 878 aaPredicted RBP21.94■■□□□ 1.1
PSME3-215ENST00000592578 NUTM2EB1AL46 878 aaPredicted RBP21.94■■□□□ 1.1
PSME3-215ENST00000592578 NUTM2AQ8IVF1 878 aaPredicted RBP21.94■■□□□ 1.1
PSME3-215ENST00000592578 RIMS2Q9UQ26 1411 aa21.94■■□□□ 1.1
PSME3-215ENST00000592578 ZFYVE9O95405 1425 aa21.92■■□□□ 1.1
PSME3-215ENST00000592578 PIK3R4Q99570 1358 aa21.91■■□□□ 1.1
PSME3-215ENST00000592578 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.91■■□□□ 1.1
PSME3-215ENST00000592578 AFF2P51816 1311 aa21.89■■□□□ 1.1
PSME3-215ENST00000592578 CHGAP10645 457 aaKnown RBP21.89■■□□□ 1.09
PSME3-215ENST00000592578 DIP2AQ14689 1571 aa21.89■■□□□ 1.09
PSME3-215ENST00000592578 ADGRL2O95490 1459 aa21.89■■□□□ 1.09
PSME3-215ENST00000592578 MYO5BQ9ULV0 1848 aa21.88■■□□□ 1.09
PSME3-215ENST00000592578 GCC2Q8IWJ2 1684 aa21.88■■□□□ 1.09
PSME3-215ENST00000592578 RBM6P78332 1123 aaKnown RBP21.86■■□□□ 1.09
PSME3-215ENST00000592578 BRINP3Q76B58 766 aa21.86■■□□□ 1.09
PSME3-215ENST00000592578 LRRC59Q96AG4 307 aaKnown RBP21.85■■□□□ 1.09
PSME3-215ENST00000592578 NUTM2DQ5VT03 806 aaPredicted RBP21.84■■□□□ 1.09
PSME3-215ENST00000592578 NGLY1Q96IV0 654 aa21.84■■□□□ 1.09
PSME3-215ENST00000592578 TMEM131LA2VDJ0 1609 aa21.84■■□□□ 1.09
PSME3-215ENST00000592578 DCCP43146 1447 aa21.83■■□□□ 1.09
PSME3-215ENST00000592578 QTRT2Q9H974 415 aaKnown RBP21.83■■□□□ 1.09
PSME3-215ENST00000592578 ANKRD50Q9ULJ7 1429 aa21.82■■□□□ 1.08
PSME3-215ENST00000592578 TRPM2O94759 1503 aa21.82■■□□□ 1.08
PSME3-215ENST00000592578 SETD5Q9C0A6 1442 aa21.81■■□□□ 1.08
PSME3-215ENST00000592578 C8orf37Q96NL8 207 aa21.81■■□□□ 1.08
PSME3-215ENST00000592578 AMOTL2Q9Y2J4 779 aa21.81■■□□□ 1.08
PSME3-215ENST00000592578 PPARGC1BQ86YN6 1023 aaKnown RBP21.8■■□□□ 1.08
PSME3-215ENST00000592578 ADAMTS13Q76LX8 1427 aa21.8■■□□□ 1.08
PSME3-215ENST00000592578 ATAD2Q6PL18 1390 aa21.77■■□□□ 1.08
PSME3-215ENST00000592578 ASXL1Q8IXJ9 1541 aa21.77■■□□□ 1.08
PSME3-215ENST00000592578 RGS12O14924 1447 aa21.77■■□□□ 1.08
PSME3-215ENST00000592578 ZRANB1Q9UGI0 708 aa21.76■■□□□ 1.07
PSME3-215ENST00000592578 ROCK1Q13464 1354 aa21.75■■□□□ 1.07
PSME3-215ENST00000592578 NHSL1Q5SYE7 1610 aa21.73■■□□□ 1.07
PSME3-215ENST00000592578 ITGAEP38570 1179 aa21.72■■□□□ 1.07
PSME3-215ENST00000592578 MST1RQ04912 1400 aa21.7■■□□□ 1.06
PSME3-215ENST00000592578 PNPLA6Q8IY17 1366 aa21.69■■□□□ 1.06
PSME3-215ENST00000592578 ADAMTS2O95450 1211 aa21.68■■□□□ 1.06
PSME3-215ENST00000592578 TRPC5Q9UL62 973 aaPredicted RBP21.68■■□□□ 1.06
PSME3-215ENST00000592578 PTPRUQ92729 1446 aa21.67■■□□□ 1.06
PSME3-215ENST00000592578 CCDC125Q86Z20 511 aa21.67■■□□□ 1.06
PSME3-215ENST00000592578 UNC13BO14795 1591 aa21.66■■□□□ 1.06
PSME3-215ENST00000592578 USP21Q9UK80 565 aa21.66■■□□□ 1.06
PSME3-215ENST00000592578 E9PCH4 1651 aa21.64■■□□□ 1.05
PSME3-215ENST00000592578 XRN1Q8IZH2 1706 aaKnown RBP21.63■■□□□ 1.05
PSME3-215ENST00000592578 SRCAPQ6ZRS2 3230 aa21.63■■□□□ 1.05
PSME3-215ENST00000592578 ADGRL3Q9HAR2 1447 aa21.63■■□□□ 1.05
PSME3-215ENST00000592578 ZNF326Q5BKZ1 582 aaKnown RBP21.62■■□□□ 1.05
PSME3-215ENST00000592578 RRBP1Q9P2E9 1410 aaKnown RBP21.62■■□□□ 1.05
PSME3-215ENST00000592578 SETBP1Q9Y6X0 1596 aa21.61■■□□□ 1.05
PSME3-215ENST00000592578 DDX17Q92841 729 aaKnown RBP21.6■■□□□ 1.05
PSME3-215ENST00000592578 PTCH1Q13635 1447 aa21.6■■□□□ 1.05
PSME3-215ENST00000592578 NUP155O75694 1391 aa21.6■■□□□ 1.05
PSME3-215ENST00000592578 IQGAP3Q86VI3 1631 aa21.58■■□□□ 1.04
PSME3-215ENST00000592578 FNBP4Q8N3X1 1017 aaPredicted RBP21.57■■□□□ 1.04
PSME3-215ENST00000592578 C1orf167Q5SNV9 1468 aa21.55■■□□□ 1.04
PSME3-215ENST00000592578 NRXN3Q9Y4C0 1643 aa21.55■■□□□ 1.04
PSME3-215ENST00000592578 METP08581 1390 aa21.54■■□□□ 1.04
PSME3-215ENST00000592578 SOS2Q07890 1332 aaPredicted RBP21.54■■□□□ 1.04
PSME3-215ENST00000592578 ATRNO75882 1429 aa21.53■■□□□ 1.04
PSME3-215ENST00000592578 NALCNQ8IZF0 1738 aa21.52■■□□□ 1.04
PSME3-215ENST00000592578 LAMC1P11047 1609 aa21.51■■□□□ 1.03
PSME3-215ENST00000592578 SF3B2Q13435 895 aaKnown RBP21.49■■□□□ 1.03
PSME3-215ENST00000592578 SPHKAPQ2M3C7 1700 aa21.47■■□□□ 1.03
PSME3-215ENST00000592578 ORAI2Q96SN7 254 aa21.47■■□□□ 1.03
PSME3-215ENST00000592578 NPHP3Q7Z494 1330 aa21.47■■□□□ 1.03
PSME3-215ENST00000592578 NAIPQ13075 1403 aa21.46■■□□□ 1.03
PSME3-215ENST00000592578 GJD4Q96KN9 370 aaPredicted RBP21.46■■□□□ 1.03
PSME3-215ENST00000592578 COL22A1Q8NFW1 1626 aaPredicted RBP21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms