RNA–Protein interactions for RNA: ENST00000591470.5

GCDH-216, Transcript of glutaryl-CoA dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCDH, Length 1,867 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-216ENST00000591470 WASHC2CQ9Y4E1 1318 aa25.62■■□□□ 1.69
GCDH-216ENST00000591470 PNISRQ8TF01 805 aaKnown RBP25.62■■□□□ 1.69
GCDH-216ENST00000591470 CNGB1Q14028 1251 aaPredicted RBP25.61■■□□□ 1.69
GCDH-216ENST00000591470 CAMSAP1Q5T5Y3 1602 aa25.6■■□□□ 1.69
GCDH-216ENST00000591470 RAPGEF3O95398 923 aa25.59■■□□□ 1.69
GCDH-216ENST00000591470 TMC1Q8TDI8 760 aa25.58■■□□□ 1.69
GCDH-216ENST00000591470 LRPPRCP42704 1394 aaKnown RBP25.58■■□□□ 1.69
GCDH-216ENST00000591470 EIF3AQ14152 1382 aaKnown RBP25.56■■□□□ 1.68
GCDH-216ENST00000591470 GGT6Q6P531 493 aa25.55■■□□□ 1.68
GCDH-216ENST00000591470 ZC3H13Q5T200 1668 aaKnown RBP25.54■■□□□ 1.68
GCDH-216ENST00000591470 SYNMO15061 1565 aa25.54■■□□□ 1.68
GCDH-216ENST00000591470 BCANQ96GW7 911 aa25.54■■□□□ 1.68
GCDH-216ENST00000591470 ADGRF5Q8IZF2 1346 aa25.54■■□□□ 1.68
GCDH-216ENST00000591470 PPLO60437 1756 aa25.54■■□□□ 1.68
GCDH-216ENST00000591470 PANK3Q9H999 370 aa25.53■■□□□ 1.68
GCDH-216ENST00000591470 NOS1P29475 1434 aa25.52■■□□□ 1.68
GCDH-216ENST00000591470 NLRP13Q86W25 1043 aa25.52■■□□□ 1.68
GCDH-216ENST00000591470 SIGLEC1Q9BZZ2 1709 aa25.52■■□□□ 1.68
GCDH-216ENST00000591470 DIP2BQ9P265 1576 aa25.51■■□□□ 1.68
GCDH-216ENST00000591470 SETBP1Q9Y6X0 1596 aa25.51■■□□□ 1.68
GCDH-216ENST00000591470 PIK3C2BO00750 1634 aa25.51■■□□□ 1.67
GCDH-216ENST00000591470 CDCA8Q53HL2 280 aa25.51■■□□□ 1.67
GCDH-216ENST00000591470 ZMYM4Q5VZL5 1548 aa25.5■■□□□ 1.67
GCDH-216ENST00000591470 MYO3AQ8NEV4 1616 aa25.5■■□□□ 1.67
GCDH-216ENST00000591470 ARHGAP31Q2M1Z3 1444 aa25.5■■□□□ 1.67
GCDH-216ENST00000591470 CFAP70Q5T0N1 1121 aa25.49■■□□□ 1.67
GCDH-216ENST00000591470 MYOM1P52179 1685 aa25.49■■□□□ 1.67
GCDH-216ENST00000591470 SMG6Q86US8 1419 aaKnown RBP25.49■■□□□ 1.67
GCDH-216ENST00000591470 YEATS2Q9ULM3 1422 aa25.48■■□□□ 1.67
GCDH-216ENST00000591470 CFAP65Q6ZU64 1925 aaKnown RBP25.47■■□□□ 1.67
GCDH-216ENST00000591470 KDM5AP29375 1690 aaKnown RBP25.47■■□□□ 1.67
GCDH-216ENST00000591470 RPGRIP1LQ68CZ1 1315 aa25.45■■□□□ 1.67
GCDH-216ENST00000591470 SLC24A1O60721 1099 aa25.45■■□□□ 1.67
GCDH-216ENST00000591470 PIK3C2GO75747 1445 aa25.45■■□□□ 1.66
GCDH-216ENST00000591470 ERICH6BQ5W0A0 696 aa25.44■■□□□ 1.66
GCDH-216ENST00000591470 INSRP06213 1382 aa25.42■■□□□ 1.66
GCDH-216ENST00000591470 ERVK-7P63135 1459 aa25.42■■□□□ 1.66
GCDH-216ENST00000591470 CC2D1BQ5T0F9 858 aaKnown RBP25.41■■□□□ 1.66
GCDH-216ENST00000591470 SBNO2Q9Y2G9 1366 aa25.41■■□□□ 1.66
GCDH-216ENST00000591470 ADGRB1O14514 1584 aa25.39■■□□□ 1.66
GCDH-216ENST00000591470 CHGAP10645 457 aaKnown RBP25.39■■□□□ 1.66
GCDH-216ENST00000591470 FAM69CQ0P6D2 419 aa25.39■■□□□ 1.66
GCDH-216ENST00000591470 NUDCQ9Y266 331 aa25.38■■□□□ 1.65
GCDH-216ENST00000591470 C14orf93Q9H972 538 aaKnown RBP25.38■■□□□ 1.65
GCDH-216ENST00000591470 NEXMIFQ5QGS0 1516 aa25.37■■□□□ 1.65
GCDH-216ENST00000591470 ASXL1Q8IXJ9 1541 aa25.37■■□□□ 1.65
GCDH-216ENST00000591470 REREQ9P2R6 1566 aa25.37■■□□□ 1.65
GCDH-216ENST00000591470 NPC1L1Q9UHC9 1359 aa25.36■■□□□ 1.65
GCDH-216ENST00000591470 KNSTRNQ9Y448 316 aa25.35■■□□□ 1.65
GCDH-216ENST00000591470 AMER1Q5JTC6 1135 aaPredicted RBP25.34■■□□□ 1.65
GCDH-216ENST00000591470 PREX1Q8TCU6 1659 aa25.34■■□□□ 1.65
GCDH-216ENST00000591470 IRX6P78412 446 aaPredicted RBP25.32■■□□□ 1.64
GCDH-216ENST00000591470 TSHZ2Q9NRE2 1034 aa25.32■■□□□ 1.64
GCDH-216ENST00000591470 TSPOAP1O95153 1857 aa25.32■■□□□ 1.64
GCDH-216ENST00000591470 BLMP54132 1417 aaPredicted RBP25.32■■□□□ 1.64
GCDH-216ENST00000591470 QRICH2Q9H0J4 1663 aa25.3■■□□□ 1.64
GCDH-216ENST00000591470 AGLP35573 1532 aa25.3■■□□□ 1.64
GCDH-216ENST00000591470 RNF123Q5XPI4 1314 aa25.3■■□□□ 1.64
GCDH-216ENST00000591470 CENPJQ9HC77 1338 aaPredicted RBP25.3■■□□□ 1.64
GCDH-216ENST00000591470 SLC52A1Q9NWF4 448 aa25.29■■□□□ 1.64
GCDH-216ENST00000591470 ZFYVE9O95405 1425 aa25.29■■□□□ 1.64
GCDH-216ENST00000591470 TMEM131LA2VDJ0 1609 aa25.26■■□□□ 1.63
GCDH-216ENST00000591470 VGFO15240 615 aaPredicted RBP25.26■■□□□ 1.63
GCDH-216ENST00000591470 IDI1Q13907 227 aa25.26■■□□□ 1.63
GCDH-216ENST00000591470 PPP2R1AP30153 589 aa25.26■■□□□ 1.63
GCDH-216ENST00000591470 PPP4R2Q9NY27 417 aa25.25■■□□□ 1.63
GCDH-216ENST00000591470 MYO5BQ9ULV0 1848 aa25.23■■□□□ 1.63
GCDH-216ENST00000591470 ARHGEF28Q8N1W1 1705 aaKnown RBP25.23■■□□□ 1.63
GCDH-216ENST00000591470 PDE3BQ13370 1112 aa25.21■■□□□ 1.63
GCDH-216ENST00000591470 TRAK1Q9UPV9 953 aa25.21■■□□□ 1.63
GCDH-216ENST00000591470 PPP6R1Q9UPN7 881 aa25.21■■□□□ 1.63
GCDH-216ENST00000591470 SENP3-EIF4A1A0A087X0R7 540 aa25.19■■□□□ 1.62
GCDH-216ENST00000591470 KIF13AQ9H1H9 1805 aa25.19■■□□□ 1.62
GCDH-216ENST00000591470 TMEM132EQ6IEE7 984 aa25.19■■□□□ 1.62
GCDH-216ENST00000591470 CARD14Q9BXL6 1004 aa25.17■■□□□ 1.62
GCDH-216ENST00000591470 PUS7Q96PZ0 661 aaKnown RBP25.15■■□□□ 1.62
GCDH-216ENST00000591470 ARHGEF40Q8TER5 1519 aa25.15■■□□□ 1.62
GCDH-216ENST00000591470 CLTCQ00610 1675 aaKnown RBP25.15■■□□□ 1.62
GCDH-216ENST00000591470 NUTM2DQ5VT03 806 aaPredicted RBP25.13■■□□□ 1.61
GCDH-216ENST00000591470 USP32Q8NFA0 1604 aa25.12■■□□□ 1.61
GCDH-216ENST00000591470 ADAMTS8Q9UP79 889 aa25.12■■□□□ 1.61
GCDH-216ENST00000591470 SPATA31D1Q6ZQQ2 1576 aa25.12■■□□□ 1.61
GCDH-216ENST00000591470 TULP4Q9NRJ4 1543 aa25.12■■□□□ 1.61
GCDH-216ENST00000591470 FBXO31Q5XUX0 539 aaPredicted RBP25.11■■□□□ 1.61
GCDH-216ENST00000591470 WDR43Q15061 677 aaKnown RBP eCLIP25.08■■□□□ 1.61
GCDH-216ENST00000591470 SALL2Q9Y467 1007 aaPredicted RBP25.07■■□□□ 1.6
GCDH-216ENST00000591470 NSD3Q9BZ95 1437 aa25.07■■□□□ 1.6
GCDH-216ENST00000591470 EVC2Q86UK5 1308 aa25.06■■□□□ 1.6
GCDH-216ENST00000591470 PTPRMP28827 1452 aa25.04■■□□□ 1.6
GCDH-216ENST00000591470 SLC12A5Q9H2X9 1139 aa25.03■■□□□ 1.6
GCDH-216ENST00000591470 ALKQ9UM73 1620 aa25.03■■□□□ 1.6
GCDH-216ENST00000591470 CDCA7LQ96GN5 454 aa25.02■■□□□ 1.6
GCDH-216ENST00000591470 RCAN3Q9UKA8 241 aa25.02■■□□□ 1.6
GCDH-216ENST00000591470 B4GALNT3Q6L9W6 998 aa25.02■■□□□ 1.6
GCDH-216ENST00000591470 A2ML1A8K2U0 1454 aa25.01■■□□□ 1.59
GCDH-216ENST00000591470 TRHP20396 242 aaPredicted RBP25.01■■□□□ 1.59
GCDH-216ENST00000591470 RRP1P56182 461 aaKnown RBP25■■□□□ 1.59
GCDH-216ENST00000591470 YTHDC2Q9H6S0 1430 aaKnown RBP25■■□□□ 1.59
GCDH-216ENST00000591470 POLR3AO14802 1390 aaPredicted RBP24.99■■□□□ 1.59
GCDH-216ENST00000591470 ANKRD36BQ8N2N9 1353 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms