RNA–Protein interactions for RNA: ENST00000590683.2

AP3D1-208, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 5

Gene AP3D1, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-208ENST00000590683 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.32□□□□□ -0.12
AP3D1-208ENST00000590683 MAST1Q9Y2H9 1570 aa14.31□□□□□ -0.12
AP3D1-208ENST00000590683 EFCAB6Q5THR3 1501 aa14.28□□□□□ -0.12
AP3D1-208ENST00000590683 EIF2AK4Q9P2K8 1649 aaKnown RBP14.27□□□□□ -0.12
AP3D1-208ENST00000590683 STAG3Q9UJ98 1225 aa14.26□□□□□ -0.13
AP3D1-208ENST00000590683 NGLY1Q96IV0 654 aa14.25□□□□□ -0.13
AP3D1-208ENST00000590683 MTUS2Q5JR59 1369 aa14.24□□□□□ -0.13
AP3D1-208ENST00000590683 NHSL1Q5SYE7 1610 aa14.24□□□□□ -0.13
AP3D1-208ENST00000590683 BRINP3Q76B58 766 aa14.23□□□□□ -0.13
AP3D1-208ENST00000590683 C14orf37Q86TY3 774 aa14.23□□□□□ -0.13
AP3D1-208ENST00000590683 BCANQ96GW7 911 aa14.23□□□□□ -0.13
AP3D1-208ENST00000590683 SETD5Q9C0A6 1442 aa14.22□□□□□ -0.13
AP3D1-208ENST00000590683 CADPS2Q86UW7 1296 aa14.21□□□□□ -0.13
AP3D1-208ENST00000590683 CCDC125Q86Z20 511 aa14.21□□□□□ -0.13
AP3D1-208ENST00000590683 ARHGAP31Q2M1Z3 1444 aa14.21□□□□□ -0.13
AP3D1-208ENST00000590683 ARHGEF5Q12774 1597 aa14.21□□□□□ -0.14
AP3D1-208ENST00000590683 ASXL1Q8IXJ9 1541 aa14.2□□□□□ -0.14
AP3D1-208ENST00000590683 MYO5BQ9ULV0 1848 aa14.2□□□□□ -0.14
AP3D1-208ENST00000590683 ATF3P18847 181 aa14.2□□□□□ -0.14
AP3D1-208ENST00000590683 NCOA3Q9Y6Q9 1424 aa14.19□□□□□ -0.14
AP3D1-208ENST00000590683 ADAMTS2O95450 1211 aa14.19□□□□□ -0.14
AP3D1-208ENST00000590683 IDI1Q13907 227 aa14.19□□□□□ -0.14
AP3D1-208ENST00000590683 PNPLA6Q8IY17 1366 aa14.19□□□□□ -0.14
AP3D1-208ENST00000590683 RSPH4AQ5TD94 716 aa14.18□□□□□ -0.14
AP3D1-208ENST00000590683 C19orf44Q9H6X5 657 aa14.18□□□□□ -0.14
AP3D1-208ENST00000590683 ADGRB3O60242 1522 aa14.18□□□□□ -0.14
AP3D1-208ENST00000590683 EHBP1L1Q8N3D4 1523 aa14.17□□□□□ -0.14
AP3D1-208ENST00000590683 DEFB132Q7Z7B7 95 aa14.17□□□□□ -0.14
AP3D1-208ENST00000590683 USP21Q9UK80 565 aa14.17□□□□□ -0.14
AP3D1-208ENST00000590683 TSPY4P0CV99 314 aa14.16□□□□□ -0.14
AP3D1-208ENST00000590683 TSPY10P0CW01 314 aa14.16□□□□□ -0.14
AP3D1-208ENST00000590683 DDX17Q92841 729 aaKnown RBP14.16□□□□□ -0.14
AP3D1-208ENST00000590683 TRPC5Q9UL62 973 aaPredicted RBP14.16□□□□□ -0.14
AP3D1-208ENST00000590683 IFFO2Q5TF58 517 aa14.15□□□□□ -0.14
AP3D1-208ENST00000590683 LRRC59Q96AG4 307 aaKnown RBP14.15□□□□□ -0.14
AP3D1-208ENST00000590683 ATRNO75882 1429 aa14.15□□□□□ -0.14
AP3D1-208ENST00000590683 CEP162Q5TB80 1403 aa14.15□□□□□ -0.14
AP3D1-208ENST00000590683 PSDA5PKW4 1024 aaPredicted RBP14.14□□□□□ -0.15
AP3D1-208ENST00000590683 YY1P25490 414 aa14.14□□□□□ -0.15
AP3D1-208ENST00000590683 BLMP54132 1417 aaPredicted RBP14.14□□□□□ -0.15
AP3D1-208ENST00000590683 BRWD3Q6RI45 1802 aa14.13□□□□□ -0.15
AP3D1-208ENST00000590683 PLEKHG1Q9ULL1 1385 aa14.12□□□□□ -0.15
AP3D1-208ENST00000590683 ZFYVE9O95405 1425 aa14.11□□□□□ -0.15
AP3D1-208ENST00000590683 HRCP23327 699 aa14.11□□□□□ -0.15
AP3D1-208ENST00000590683 BCL9LQ86UU0 1499 aa14.11□□□□□ -0.15
AP3D1-208ENST00000590683 MST1RQ04912 1400 aa14.1□□□□□ -0.15
AP3D1-208ENST00000590683 GCC2Q8IWJ2 1684 aa14.1□□□□□ -0.15
AP3D1-208ENST00000590683 DUOX2Q9NRD8 1548 aa14.1□□□□□ -0.15
AP3D1-208ENST00000590683 FNBP4Q8N3X1 1017 aaPredicted RBP14.09□□□□□ -0.15
AP3D1-208ENST00000590683 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.09□□□□□ -0.152e-7■■□□□ 11.8
AP3D1-208ENST00000590683 TBX22Q9Y458 520 aa14.08□□□□□ -0.16
AP3D1-208ENST00000590683 PPP1R15AO75807 674 aaPredicted RBP14.07□□□□□ -0.16
AP3D1-208ENST00000590683 MARF1Q9Y4F3 1742 aaKnown RBP14.07□□□□□ -0.16
AP3D1-208ENST00000590683 DCCP43146 1447 aa14.07□□□□□ -0.16
AP3D1-208ENST00000590683 ADAMTS13Q76LX8 1427 aa14.07□□□□□ -0.16
AP3D1-208ENST00000590683 RIMS2Q9UQ26 1411 aa14.07□□□□□ -0.16
AP3D1-208ENST00000590683 NOS1P29475 1434 aa14.06□□□□□ -0.16
AP3D1-208ENST00000590683 UNC13BO14795 1591 aa14.05□□□□□ -0.16
AP3D1-208ENST00000590683 PTCH1Q13635 1447 aa14.04□□□□□ -0.16
AP3D1-208ENST00000590683 PTPRUQ92729 1446 aa14.04□□□□□ -0.16
AP3D1-208ENST00000590683 SF3B2Q13435 895 aaKnown RBP14.03□□□□□ -0.16
AP3D1-208ENST00000590683 TRPM2O94759 1503 aa14.03□□□□□ -0.16
AP3D1-208ENST00000590683 GLI3P10071 1580 aa14.03□□□□□ -0.16
AP3D1-208ENST00000590683 TMEM131LA2VDJ0 1609 aa14.03□□□□□ -0.16
AP3D1-208ENST00000590683 SPHKAPQ2M3C7 1700 aa14.03□□□□□ -0.16
AP3D1-208ENST00000590683 LAMC1P11047 1609 aa14.02□□□□□ -0.16
AP3D1-208ENST00000590683 COL22A1Q8NFW1 1626 aaPredicted RBP14.02□□□□□ -0.16
AP3D1-208ENST00000590683 LMTK2Q8IWU2 1503 aa14.02□□□□□ -0.16
AP3D1-208ENST00000590683 GJD4Q96KN9 370 aaPredicted RBP14.02□□□□□ -0.17
AP3D1-208ENST00000590683 AMOTL2Q9Y2J4 779 aa14.02□□□□□ -0.17
AP3D1-208ENST00000590683 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.01□□□□□ -0.17
AP3D1-208ENST00000590683 NALCNQ8IZF0 1738 aa14.01□□□□□ -0.17
AP3D1-208ENST00000590683 XRN1Q8IZH2 1706 aaKnown RBP14.01□□□□□ -0.17
AP3D1-208ENST00000590683 ERBINQ96RT1 1412 aa14□□□□□ -0.17
AP3D1-208ENST00000590683 PIK3R4Q99570 1358 aa14□□□□□ -0.17
AP3D1-208ENST00000590683 KANK1Q14678 1352 aa13.99□□□□□ -0.17
AP3D1-208ENST00000590683 KIF15Q9NS87 1388 aa13.99□□□□□ -0.17
AP3D1-208ENST00000590683 SLC52A1Q9NWF4 448 aa13.99□□□□□ -0.17
AP3D1-208ENST00000590683 RALGAPBQ86X10 1494 aa13.98□□□□□ -0.17
AP3D1-208ENST00000590683 HDGFP51858 240 aaKnown RBP13.97□□□□□ -0.17
AP3D1-208ENST00000590683 R3HDM1Q15032 1099 aaKnown RBP13.97□□□□□ -0.17
AP3D1-208ENST00000590683 RRP7BPQ9NSQ0 103 aa13.97□□□□□ -0.17
AP3D1-208ENST00000590683 CROCC2H7BZ55 1655 aa13.97□□□□□ -0.17
AP3D1-208ENST00000590683 SENP3-EIF4A1A0A087X0R7 540 aa13.96□□□□□ -0.17
AP3D1-208ENST00000590683 SOS2Q07890 1332 aaPredicted RBP13.95□□□□□ -0.18
AP3D1-208ENST00000590683 MYOM2P54296 1465 aa13.95□□□□□ -0.18
AP3D1-208ENST00000590683 NRXN3Q9Y4C0 1643 aa13.93□□□□□ -0.18
AP3D1-208ENST00000590683 C1orf167Q5SNV9 1468 aa13.93□□□□□ -0.18
AP3D1-208ENST00000590683 ADGRL3Q9HAR2 1447 aa13.93□□□□□ -0.18
AP3D1-208ENST00000590683 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.93□□□□□ -0.18
AP3D1-208ENST00000590683 BAG6P46379 1132 aa13.92□□□□□ -0.18
AP3D1-208ENST00000590683 SEPT12Q8IYM1 358 aa13.92□□□□□ -0.18
AP3D1-208ENST00000590683 CAMTA1Q9Y6Y1 1673 aa13.91□□□□□ -0.18
AP3D1-208ENST00000590683 CHGAP10645 457 aaKnown RBP13.91□□□□□ -0.18
AP3D1-208ENST00000590683 ORAI2Q96SN7 254 aa13.91□□□□□ -0.18
AP3D1-208ENST00000590683 RGPD1P0DJD0 1748 aa13.9□□□□□ -0.18
AP3D1-208ENST00000590683 EN1Q05925 392 aaPredicted RBP13.9□□□□□ -0.18
AP3D1-208ENST00000590683 UNC5CLQ8IV45 518 aa13.89□□□□□ -0.19
AP3D1-208ENST00000590683 SLIT2O94813 1529 aa13.89□□□□□ -0.19
AP3D1-208ENST00000590683 MYOM3Q5VTT5 1437 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms