RNA–Protein interactions for RNA: ENST00000590677.5

LINC00662-207, long intergenic non-protein coding RNA 662, humanhuman

TSL 5 BASIC

Gene LINC00662, Length 883 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00662-207ENST00000590677 ARID3CA6NKF2 412 aa13.19□□□□□ -0.3
LINC00662-207ENST00000590677 CEP162Q5TB80 1403 aa13.19□□□□□ -0.3
LINC00662-207ENST00000590677 MARVELD3Q96A59 401 aa13.18□□□□□ -0.3
LINC00662-207ENST00000590677 ARAP3Q8WWN8 1544 aa13.18□□□□□ -0.3
LINC00662-207ENST00000590677 TESPA1A2RU30 521 aaPredicted RBP13.17□□□□□ -0.3
LINC00662-207ENST00000590677 SEMA3EO15041 775 aa13.17□□□□□ -0.3
LINC00662-207ENST00000590677 EMP3P54852 163 aa13.17□□□□□ -0.3
LINC00662-207ENST00000590677 ATP10BO94823 1461 aa13.16□□□□□ -0.3
LINC00662-207ENST00000590677 FOSBP53539 338 aa13.15□□□□□ -0.3
LINC00662-207ENST00000590677 PHLDB1Q86UU1 1377 aa13.14□□□□□ -0.31
LINC00662-207ENST00000590677 PSDA5PKW4 1024 aaPredicted RBP13.13□□□□□ -0.31
LINC00662-207ENST00000590677 POTEB3A0JP26 581 aa13.12□□□□□ -0.31
LINC00662-207ENST00000590677 PHF14O94880 888 aa13.12□□□□□ -0.31
LINC00662-207ENST00000590677 MLLT3P42568 568 aaPredicted RBP13.12□□□□□ -0.31
LINC00662-207ENST00000590677 POTEBQ6S5H4 581 aa13.12□□□□□ -0.31
LINC00662-207ENST00000590677 PTPRMP28827 1452 aa13.11□□□□□ -0.31
LINC00662-207ENST00000590677 RAPGEF3O95398 923 aa13.11□□□□□ -0.31
LINC00662-207ENST00000590677 DDX12PQ92771 950 aa13.11□□□□□ -0.31
LINC00662-207ENST00000590677 PCDHGA10Q9Y5H3 936 aa13.11□□□□□ -0.31
LINC00662-207ENST00000590677 ERBB3P21860 1342 aa13.11□□□□□ -0.31
LINC00662-207ENST00000590677 ABCA9Q8IUA7 1624 aa13.1□□□□□ -0.31
LINC00662-207ENST00000590677 NBR1Q14596 966 aa13.1□□□□□ -0.31
LINC00662-207ENST00000590677 FBXO41Q8TF61 875 aa13.1□□□□□ -0.31
LINC00662-207ENST00000590677 CLIP1P30622 1438 aa13.09□□□□□ -0.31
LINC00662-207ENST00000590677 EPAS1Q99814 870 aa13.09□□□□□ -0.31
LINC00662-207ENST00000590677 NEO1Q92859 1461 aa13.09□□□□□ -0.31
LINC00662-207ENST00000590677 FAM205CA6NFA0 338 aa13.08□□□□□ -0.32
LINC00662-207ENST00000590677 VARS2Q5ST30 1063 aaKnown RBP13.08□□□□□ -0.32
LINC00662-207ENST00000590677 OSBPP22059 807 aa13.07□□□□□ -0.32
LINC00662-207ENST00000590677 ZNF454Q8N9F8 522 aa13.07□□□□□ -0.32
LINC00662-207ENST00000590677 HS3ST6Q96QI5 342 aa13.07□□□□□ -0.32
LINC00662-207ENST00000590677 ADAMTSL3P82987 1691 aa13.07□□□□□ -0.32
LINC00662-207ENST00000590677 ARID4BQ4LE39 1312 aaPredicted RBP13.07□□□□□ -0.32
LINC00662-207ENST00000590677 SAMD9Q5K651 1589 aa13.07□□□□□ -0.32
LINC00662-207ENST00000590677 PPP4R3BQ5MIZ7 849 aa13.06□□□□□ -0.32
LINC00662-207ENST00000590677 BCANQ96GW7 911 aa13.06□□□□□ -0.32
LINC00662-207ENST00000590677 RAPGEF6Q8TEU7 1601 aa13.06□□□□□ -0.32
LINC00662-207ENST00000590677 GRXCR2A6NFK2 248 aa13.05□□□□□ -0.32
LINC00662-207ENST00000590677 PRIM1P49642 420 aaKnown RBP13.05□□□□□ -0.32
LINC00662-207ENST00000590677 TYW1BQ6NUM6 668 aa13.05□□□□□ -0.32
LINC00662-207ENST00000590677 FBXW7Q969H0 707 aa13.05□□□□□ -0.32
LINC00662-207ENST00000590677 FRMPD1Q5SYB0 1578 aa13.04□□□□□ -0.32
LINC00662-207ENST00000590677 ZDHHC16Q969W1 377 aa13.04□□□□□ -0.32
LINC00662-207ENST00000590677 NUP153P49790 1475 aaKnown RBP13.04□□□□□ -0.32
LINC00662-207ENST00000590677 POTEMA6NI47 508 aa13.03□□□□□ -0.32
LINC00662-207ENST00000590677 POTEGQ6S5H5 508 aa13.03□□□□□ -0.32
LINC00662-207ENST00000590677 PCF11O94913 1555 aaKnown RBP13.03□□□□□ -0.32
LINC00662-207ENST00000590677 MADDQ8WXG6 1647 aa13.02□□□□□ -0.32
LINC00662-207ENST00000590677 TRIM26Q12899 539 aaPredicted RBP13.02□□□□□ -0.33
LINC00662-207ENST00000590677 ZNF687Q8N1G0 1237 aa13.02□□□□□ -0.33
LINC00662-207ENST00000590677 BCORL1Q5H9F3 1711 aa13.02□□□□□ -0.33
LINC00662-207ENST00000590677 RANGAP1P46060 587 aaPredicted RBP13.01□□□□□ -0.33
LINC00662-207ENST00000590677 EN1Q05925 392 aaPredicted RBP13.01□□□□□ -0.33
LINC00662-207ENST00000590677 SMYD5Q6GMV2 418 aa13.01□□□□□ -0.33
LINC00662-207ENST00000590677 ADAM33Q9BZ11 813 aa13.01□□□□□ -0.33
LINC00662-207ENST00000590677 BCL2L12Q9HB09 334 aa13.01□□□□□ -0.33
LINC00662-207ENST00000590677 VPS8Q8N3P4 1428 aa13.01□□□□□ -0.33
LINC00662-207ENST00000590677 DENND4BO75064 1496 aaPredicted RBP13.01□□□□□ -0.33
LINC00662-207ENST00000590677 LMTK3Q96Q04 1460 aa13.01□□□□□ -0.33
LINC00662-207ENST00000590677 ARHGEF40Q8TER5 1519 aa13.01□□□□□ -0.33
LINC00662-207ENST00000590677 FHOD3Q2V2M9 1422 aa13□□□□□ -0.33
LINC00662-207ENST00000590677 PLEKHD1A6NEE1 506 aa12.99□□□□□ -0.33
LINC00662-207ENST00000590677 POTEEQ6S8J3 1075 aa12.99□□□□□ -0.33
LINC00662-207ENST00000590677 AKNAQ7Z591 1439 aa12.98□□□□□ -0.33
LINC00662-207ENST00000590677 FANCAO15360 1455 aa12.97□□□□□ -0.33
LINC00662-207ENST00000590677 ARHGAP35Q9NRY4 1499 aa12.97□□□□□ -0.33
LINC00662-207ENST00000590677 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.96□□□□□ -0.33
LINC00662-207ENST00000590677 POGZQ7Z3K3 1410 aa12.96□□□□□ -0.34
LINC00662-207ENST00000590677 PBX2P40425 430 aa12.95□□□□□ -0.34
LINC00662-207ENST00000590677 HSPA2P54652 639 aa12.95□□□□□ -0.34
LINC00662-207ENST00000590677 RIMS1Q86UR5 1692 aaKnown RBP12.95□□□□□ -0.34
LINC00662-207ENST00000590677 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.94□□□□□ -0.34
LINC00662-207ENST00000590677 YEATS2Q9ULM3 1422 aa12.94□□□□□ -0.34
LINC00662-207ENST00000590677 CFAP74Q9C0B2 1584 aa12.94□□□□□ -0.34
LINC00662-207ENST00000590677 RICTORQ6R327 1708 aa12.93□□□□□ -0.34
LINC00662-207ENST00000590677 ZMYM4Q5VZL5 1548 aa12.93□□□□□ -0.34
LINC00662-207ENST00000590677 ZFYVE16Q7Z3T8 1539 aa12.93□□□□□ -0.34
LINC00662-207ENST00000590677 C6orf132Q5T0Z8 1188 aa12.93□□□□□ -0.34
LINC00662-207ENST00000590677 RBM26Q5T8P6 1007 aaKnown RBP12.93□□□□□ -0.34
LINC00662-207ENST00000590677 RBM33Q96EV2 1170 aaKnown RBP12.93□□□□□ -0.34
LINC00662-207ENST00000590677 TTC37Q6PGP7 1564 aa12.93□□□□□ -0.34
LINC00662-207ENST00000590677 PCGF6Q9BYE7 350 aa12.92□□□□□ -0.34
LINC00662-207ENST00000590677 EFCAB5A4FU69 1503 aa12.92□□□□□ -0.34
LINC00662-207ENST00000590677 TULP1O00294 542 aaPredicted RBP12.91□□□□□ -0.34
LINC00662-207ENST00000590677 ARHGAP33O14559 1287 aa12.91□□□□□ -0.34
LINC00662-207ENST00000590677 MAP3K7O43318 606 aa12.91□□□□□ -0.34
LINC00662-207ENST00000590677 MLECQ14165 292 aa12.91□□□□□ -0.34
LINC00662-207ENST00000590677 TSR1Q2NL82 804 aaKnown RBP12.91□□□□□ -0.34
LINC00662-207ENST00000590677 MAGI2Q86UL8 1455 aa12.91□□□□□ -0.34
LINC00662-207ENST00000590677 PTPREP23469 700 aa12.9□□□□□ -0.34
LINC00662-207ENST00000590677 NPDC1Q9NQX5 325 aaPredicted RBP12.89□□□□□ -0.35
LINC00662-207ENST00000590677 SCAPERQ9BY12 1400 aa12.88□□□□□ -0.35
LINC00662-207ENST00000590677 CDK13Q14004 1512 aaKnown RBP12.88□□□□□ -0.35
LINC00662-207ENST00000590677 LMOD2Q6P5Q4 547 aa12.88□□□□□ -0.35
LINC00662-207ENST00000590677 KRTAP3-3Q9BYR6 98 aa12.88□□□□□ -0.35
LINC00662-207ENST00000590677 KRTAP3-2Q9BYR7 98 aa12.88□□□□□ -0.35
LINC00662-207ENST00000590677 CDHR5Q9HBB8 845 aa12.88□□□□□ -0.35
LINC00662-207ENST00000590677 HECW1Q76N89 1606 aa12.88□□□□□ -0.35
LINC00662-207ENST00000590677 PLCH2O75038 1416 aa12.88□□□□□ -0.35
LINC00662-207ENST00000590677 PPP1R3GB7ZBB8 358 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms