RNA–Protein interactions for RNA: ENST00000590599.1

CTDP1-205, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 2

Gene CTDP1, Length 1,762 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-205ENST00000590599 TNRQ92752 1358 aa25.56■■□□□ 1.68
CTDP1-205ENST00000590599 SPATA31D1Q6ZQQ2 1576 aa25.55■■□□□ 1.68
CTDP1-205ENST00000590599 HIRIP3Q9BW71 556 aaPredicted RBP25.55■■□□□ 1.68
CTDP1-205ENST00000590599 HSPA5P11021 654 aaKnown RBP25.54■■□□□ 1.68
CTDP1-205ENST00000590599 MYOM2P54296 1465 aa25.53■■□□□ 1.68
CTDP1-205ENST00000590599 NCKAP5LQ9HCH0 1330 aa25.52■■□□□ 1.68
CTDP1-205ENST00000590599 ROCK2O75116 1388 aaKnown RBP25.52■■□□□ 1.68
CTDP1-205ENST00000590599 A2ML1A8K2U0 1454 aa25.49■■□□□ 1.67
CTDP1-205ENST00000590599 PPLO60437 1756 aa25.49■■□□□ 1.67
CTDP1-205ENST00000590599 IDI1Q13907 227 aa25.49■■□□□ 1.67
CTDP1-205ENST00000590599 CARD11Q9BXL7 1154 aa25.49■■□□□ 1.67
CTDP1-205ENST00000590599 USP47Q96K76 1375 aa25.48■■□□□ 1.67
CTDP1-205ENST00000590599 ILDR1Q86SU0 546 aaPredicted RBP25.48■■□□□ 1.67
CTDP1-205ENST00000590599 LAMC1P11047 1609 aa25.47■■□□□ 1.67
CTDP1-205ENST00000590599 RPGRIP1LQ68CZ1 1315 aa25.46■■□□□ 1.67
CTDP1-205ENST00000590599 TMEM131LA2VDJ0 1609 aa25.46■■□□□ 1.67
CTDP1-205ENST00000590599 GPRASP1Q5JY77 1395 aa25.45■■□□□ 1.66
CTDP1-205ENST00000590599 MYO5BQ9ULV0 1848 aa25.45■■□□□ 1.66
CTDP1-205ENST00000590599 KIAA1210Q9ULL0 1709 aa25.44■■□□□ 1.66
CTDP1-205ENST00000590599 NRXN1Q9ULB1 1477 aa25.42■■□□□ 1.66
CTDP1-205ENST00000590599 NEXMIFQ5QGS0 1516 aa25.42■■□□□ 1.66
CTDP1-205ENST00000590599 NBPF1Q3BBV0 1214 aa25.41■■□□□ 1.66
CTDP1-205ENST00000590599 POLR1AO95602 1720 aaPredicted RBP25.4■■□□□ 1.66
CTDP1-205ENST00000590599 ADGRF5Q8IZF2 1346 aa25.39■■□□□ 1.66
CTDP1-205ENST00000590599 STAG3Q9UJ98 1225 aa25.39■■□□□ 1.66
CTDP1-205ENST00000590599 NLRP1Q9C000 1473 aa25.39■■□□□ 1.65
CTDP1-205ENST00000590599 UBR1Q8IWV7 1749 aa25.38■■□□□ 1.65
CTDP1-205ENST00000590599 DMRT2Q9Y5R5 561 aa25.38■■□□□ 1.65
CTDP1-205ENST00000590599 PIK3C2GO75747 1445 aa25.35■■□□□ 1.65
CTDP1-205ENST00000590599 VGFO15240 615 aaPredicted RBP25.33■■□□□ 1.65
CTDP1-205ENST00000590599 ZFYVE9O95405 1425 aa25.32■■□□□ 1.64
CTDP1-205ENST00000590599 IQGAP1P46940 1657 aa25.32■■□□□ 1.64
CTDP1-205ENST00000590599 KDM5AP29375 1690 aaKnown RBP25.31■■□□□ 1.64
CTDP1-205ENST00000590599 DDX10Q13206 875 aaKnown RBP25.31■■□□□ 1.64
CTDP1-205ENST00000590599 THEMISQ8N1K5 641 aaPredicted RBP25.31■■□□□ 1.64
CTDP1-205ENST00000590599 CERKQ8TCT0 537 aa25.31■■□□□ 1.64
CTDP1-205ENST00000590599 CFAP70Q5T0N1 1121 aa25.3■■□□□ 1.64
CTDP1-205ENST00000590599 WASHC2AQ641Q2 1341 aa25.3■■□□□ 1.64
CTDP1-205ENST00000590599 ZNF335Q9H4Z2 1342 aaPredicted RBP25.3■■□□□ 1.64
CTDP1-205ENST00000590599 LTBP4Q8N2S1 1624 aa25.29■■□□□ 1.64
CTDP1-205ENST00000590599 ST20-MTHFSA0A0A6YYL1 179 aa25.29■■□□□ 1.64
CTDP1-205ENST00000590599 NUTM2DQ5VT03 806 aaPredicted RBP25.28■■□□□ 1.64
CTDP1-205ENST00000590599 SETBP1Q9Y6X0 1596 aa25.28■■□□□ 1.64
CTDP1-205ENST00000590599 CCDC7Q96M83 1385 aa25.28■■□□□ 1.64
CTDP1-205ENST00000590599 SCAF11Q99590 1463 aaKnown RBP25.28■■□□□ 1.64
CTDP1-205ENST00000590599 C11orf95C9JLR9 678 aaPredicted RBP25.25■■□□□ 1.63
CTDP1-205ENST00000590599 C14orf93Q9H972 538 aaKnown RBP25.25■■□□□ 1.63
CTDP1-205ENST00000590599 ANKLE2Q86XL3 938 aa25.24■■□□□ 1.63
CTDP1-205ENST00000590599 RIMS2Q9UQ26 1411 aa25.24■■□□□ 1.63
CTDP1-205ENST00000590599 FBXO41Q8TF61 875 aa25.23■■□□□ 1.63
CTDP1-205ENST00000590599 EIF3AQ14152 1382 aaKnown RBP25.23■■□□□ 1.63
CTDP1-205ENST00000590599 KIF7Q2M1P5 1343 aa25.23■■□□□ 1.63
CTDP1-205ENST00000590599 LTKP29376 864 aa25.22■■□□□ 1.63
CTDP1-205ENST00000590599 ADGRB1O14514 1584 aa25.2■■□□□ 1.62
CTDP1-205ENST00000590599 NPHP4O75161 1426 aaPredicted RBP25.19■■□□□ 1.62
CTDP1-205ENST00000590599 SENP3Q9H4L4 574 aaPredicted RBP25.18■■□□□ 1.62
CTDP1-205ENST00000590599 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.18■■□□□ 1.62
CTDP1-205ENST00000590599 MED14O60244 1454 aa25.17■■□□□ 1.62
CTDP1-205ENST00000590599 ARHGAP23Q9P227 1491 aa25.17■■□□□ 1.62
CTDP1-205ENST00000590599 STRCP1A6NGW2 1772 aa25.16■■□□□ 1.62
CTDP1-205ENST00000590599 SLIT1O75093 1534 aa25.16■■□□□ 1.62
CTDP1-205ENST00000590599 MIER1Q8N108 512 aa25.16■■□□□ 1.62
CTDP1-205ENST00000590599 HDGFP51858 240 aaKnown RBP25.16■■□□□ 1.62
CTDP1-205ENST00000590599 TMEM2Q9UHN6 1383 aa25.15■■□□□ 1.62
CTDP1-205ENST00000590599 TXNDC2Q86VQ3 553 aa25.15■■□□□ 1.62
CTDP1-205ENST00000590599 TESK2Q96S53 571 aa25.14■■□□□ 1.62
CTDP1-205ENST00000590599 POLR3GLQ9BT43 218 aa25.13■■□□□ 1.61
CTDP1-205ENST00000590599 ALKQ9UM73 1620 aa25.13■■□□□ 1.61
CTDP1-205ENST00000590599 TMEM132EQ6IEE7 984 aa25.12■■□□□ 1.61
CTDP1-205ENST00000590599 ASXL1Q8IXJ9 1541 aa25.1■■□□□ 1.61
CTDP1-205ENST00000590599 TMF1P82094 1093 aa25.1■■□□□ 1.61
CTDP1-205ENST00000590599 DISP3Q9P2K9 1392 aa25.08■■□□□ 1.61
CTDP1-205ENST00000590599 TRAK1Q9UPV9 953 aa25.08■■□□□ 1.6
CTDP1-205ENST00000590599 NRXN3Q9Y4C0 1643 aa25.07■■□□□ 1.6
CTDP1-205ENST00000590599 SETD1AO15047 1707 aaKnown RBP25.07■■□□□ 1.6
CTDP1-205ENST00000590599 ARHGEF28Q8N1W1 1705 aaKnown RBP25.07■■□□□ 1.6
CTDP1-205ENST00000590599 QRICH2Q9H0J4 1663 aa25.05■■□□□ 1.6
CTDP1-205ENST00000590599 SLC24A1O60721 1099 aa25.05■■□□□ 1.6
CTDP1-205ENST00000590599 EID1Q9Y6B2 187 aa25.05■■□□□ 1.6
CTDP1-205ENST00000590599 CENPJQ9HC77 1338 aaPredicted RBP25.04■■□□□ 1.6
CTDP1-205ENST00000590599 SBNO2Q9Y2G9 1366 aa25.02■■□□□ 1.6
CTDP1-205ENST00000590599 YTHDC2Q9H6S0 1430 aaKnown RBP25.02■■□□□ 1.6
CTDP1-205ENST00000590599 ANP32CO43423 234 aa25.02■■□□□ 1.6
CTDP1-205ENST00000590599 CDCA8Q53HL2 280 aa25.01■■□□□ 1.59
CTDP1-205ENST00000590599 SLC26A8Q96RN1 970 aa25.01■■□□□ 1.59
CTDP1-205ENST00000590599 BCANQ96GW7 911 aa25■■□□□ 1.59
CTDP1-205ENST00000590599 PLEKHG1Q9ULL1 1385 aa25■■□□□ 1.59
CTDP1-205ENST00000590599 STK26Q9P289 416 aa24.99■■□□□ 1.59
CTDP1-205ENST00000590599 CPS1P31327 1500 aa24.97■■□□□ 1.59
CTDP1-205ENST00000590599 XIRP1Q702N8 1843 aaKnown RBP24.96■■□□□ 1.59
CTDP1-205ENST00000590599 IQSEC2Q5JU85 1478 aa24.95■■□□□ 1.59
CTDP1-205ENST00000590599 LRPPRCP42704 1394 aaKnown RBP24.94■■□□□ 1.58
CTDP1-205ENST00000590599 UBAP1LF5GYI3 381 aa24.94■■□□□ 1.58
CTDP1-205ENST00000590599 DLC1Q96QB1 1528 aa24.94■■□□□ 1.58
CTDP1-205ENST00000590599 ADAMTS13Q76LX8 1427 aa24.93■■□□□ 1.58
CTDP1-205ENST00000590599 LRRC7Q96NW7 1537 aa24.93■■□□□ 1.58
CTDP1-205ENST00000590599 METP08581 1390 aa24.92■■□□□ 1.58
CTDP1-205ENST00000590599 RBM33Q96EV2 1170 aaKnown RBP24.91■■□□□ 1.58
CTDP1-205ENST00000590599 KNDC1Q76NI1 1749 aa24.91■■□□□ 1.58
CTDP1-205ENST00000590599 ABCC11Q96J66 1382 aa24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms