RNA–Protein interactions for RNA: ENST00000589007.5

RETREG3-207, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 3

Gene RETREG3, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-207ENST00000589007 TRIM52Q96A61 297 aa13.73□□□□□ -0.21
RETREG3-207ENST00000589007 MSH6P52701 1360 aa13.72□□□□□ -0.21
RETREG3-207ENST00000589007 LAMC1P11047 1609 aa13.72□□□□□ -0.21
RETREG3-207ENST00000589007 NRXN3Q9Y4C0 1643 aa13.72□□□□□ -0.21
RETREG3-207ENST00000589007 ASXL1Q8IXJ9 1541 aa13.71□□□□□ -0.21
RETREG3-207ENST00000589007 SLC26A8Q96RN1 970 aa13.71□□□□□ -0.21
RETREG3-207ENST00000589007 SLAIN2Q9P270 581 aa13.71□□□□□ -0.21
RETREG3-207ENST00000589007 ADAMTS13Q76LX8 1427 aa13.71□□□□□ -0.22
RETREG3-207ENST00000589007 CHIC1Q5VXU3 224 aa13.7□□□□□ -0.22
RETREG3-207ENST00000589007 NCOA3Q9Y6Q9 1424 aa13.7□□□□□ -0.22
RETREG3-207ENST00000589007 PROSER2Q86WR7 435 aaPredicted RBP13.69□□□□□ -0.22
RETREG3-207ENST00000589007 IDI1Q13907 227 aa13.68□□□□□ -0.22
RETREG3-207ENST00000589007 ZNF772Q68DY9 489 aaPredicted RBP13.68□□□□□ -0.22
RETREG3-207ENST00000589007 PLEKHG1Q9ULL1 1385 aa13.68□□□□□ -0.22
RETREG3-207ENST00000589007 UNC13BO14795 1591 aa13.67□□□□□ -0.22
RETREG3-207ENST00000589007 SETD5Q9C0A6 1442 aa13.67□□□□□ -0.22
RETREG3-207ENST00000589007 KIF15Q9NS87 1388 aa13.67□□□□□ -0.22
RETREG3-207ENST00000589007 NALCNQ8IZF0 1738 aa13.67□□□□□ -0.22
RETREG3-207ENST00000589007 ABCC5O15440 1437 aa13.66□□□□□ -0.22
RETREG3-207ENST00000589007 LRP5O75197 1615 aa13.66□□□□□ -0.22
RETREG3-207ENST00000589007 EID1Q9Y6B2 187 aa13.66□□□□□ -0.22
RETREG3-207ENST00000589007 PTPRUQ92729 1446 aa13.65□□□□□ -0.22
RETREG3-207ENST00000589007 MYOM3Q5VTT5 1437 aa13.64□□□□□ -0.23
RETREG3-207ENST00000589007 TRPM2O94759 1503 aa13.64□□□□□ -0.23
RETREG3-207ENST00000589007 PTPN23Q9H3S7 1636 aa13.64□□□□□ -0.23
RETREG3-207ENST00000589007 MST1RQ04912 1400 aa13.64□□□□□ -0.23
RETREG3-207ENST00000589007 RXRBP28702 533 aa13.63□□□□□ -0.23
RETREG3-207ENST00000589007 AFF2P51816 1311 aa13.63□□□□□ -0.23
RETREG3-207ENST00000589007 MARF1Q9Y4F3 1742 aaKnown RBP13.62□□□□□ -0.23
RETREG3-207ENST00000589007 COL22A1Q8NFW1 1626 aaPredicted RBP13.62□□□□□ -0.23
RETREG3-207ENST00000589007 TSPY4P0CV99 314 aa13.62□□□□□ -0.23
RETREG3-207ENST00000589007 TSPY10P0CW01 314 aa13.62□□□□□ -0.23
RETREG3-207ENST00000589007 DCCP43146 1447 aa13.62□□□□□ -0.23
RETREG3-207ENST00000589007 E9PCH4 1651 aa13.62□□□□□ -0.23
RETREG3-207ENST00000589007 BRINP3Q76B58 766 aa13.61□□□□□ -0.23
RETREG3-207ENST00000589007 RIMS2Q9UQ26 1411 aa13.61□□□□□ -0.23
RETREG3-207ENST00000589007 RPRD2Q5VT52 1461 aaKnown RBP13.61□□□□□ -0.23
RETREG3-207ENST00000589007 PNPLA6Q8IY17 1366 aa13.6□□□□□ -0.23
RETREG3-207ENST00000589007 DAPK1P53355 1430 aa13.59□□□□□ -0.23
RETREG3-207ENST00000589007 IQGAP3Q86VI3 1631 aa13.57□□□□□ -0.24
RETREG3-207ENST00000589007 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.57□□□□□ -0.24
RETREG3-207ENST00000589007 MEX3CQ5U5Q3 659 aaKnown RBP13.57□□□□□ -0.24
RETREG3-207ENST00000589007 BRWD3Q6RI45 1802 aa13.57□□□□□ -0.24
RETREG3-207ENST00000589007 ADGRL2O95490 1459 aa13.56□□□□□ -0.24
RETREG3-207ENST00000589007 PIK3R4Q99570 1358 aa13.56□□□□□ -0.24
RETREG3-207ENST00000589007 ATRNO75882 1429 aa13.55□□□□□ -0.24
RETREG3-207ENST00000589007 SPHKAPQ2M3C7 1700 aa13.53□□□□□ -0.24
RETREG3-207ENST00000589007 RBM6P78332 1123 aaKnown RBP13.53□□□□□ -0.24
RETREG3-207ENST00000589007 KANK4Q5T7N3 995 aaPredicted RBP13.53□□□□□ -0.24
RETREG3-207ENST00000589007 TBX22Q9Y458 520 aa13.53□□□□□ -0.24
RETREG3-207ENST00000589007 ATAD2Q6PL18 1390 aa13.53□□□□□ -0.24
RETREG3-207ENST00000589007 VPS8Q8N3P4 1428 aa13.53□□□□□ -0.24
RETREG3-207ENST00000589007 GLI3P10071 1580 aa13.53□□□□□ -0.24
RETREG3-207ENST00000589007 CADPS2Q86UW7 1296 aa13.52□□□□□ -0.25
RETREG3-207ENST00000589007 NUTM2BA6NNL0 878 aaPredicted RBP13.51□□□□□ -0.25
RETREG3-207ENST00000589007 NUTM2EB1AL46 878 aaPredicted RBP13.51□□□□□ -0.25
RETREG3-207ENST00000589007 NUTM2AQ8IVF1 878 aaPredicted RBP13.51□□□□□ -0.25
RETREG3-207ENST00000589007 C19orf44Q9H6X5 657 aa13.51□□□□□ -0.25
RETREG3-207ENST00000589007 MYOM2P54296 1465 aa13.5□□□□□ -0.25
RETREG3-207ENST00000589007 BCL9LQ86UU0 1499 aa13.5□□□□□ -0.25
RETREG3-207ENST00000589007 ADGRL3Q9HAR2 1447 aa13.5□□□□□ -0.25
RETREG3-207ENST00000589007 KANK1Q14678 1352 aa13.5□□□□□ -0.25
RETREG3-207ENST00000589007 RRP7BPQ9NSQ0 103 aa13.5□□□□□ -0.25
RETREG3-207ENST00000589007 STAG3Q9UJ98 1225 aa13.5□□□□□ -0.25
RETREG3-207ENST00000589007 DDX17Q92841 729 aaKnown RBP13.49□□□□□ -0.25
RETREG3-207ENST00000589007 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.49□□□□□ -0.25
RETREG3-207ENST00000589007 QTRT2Q9H974 415 aaKnown RBP13.49□□□□□ -0.25
RETREG3-207ENST00000589007 SLC52A1Q9NWF4 448 aa13.49□□□□□ -0.25
RETREG3-207ENST00000589007 C8orf37Q96NL8 207 aa13.48□□□□□ -0.25
RETREG3-207ENST00000589007 PTCH1Q13635 1447 aa13.46□□□□□ -0.26
RETREG3-207ENST00000589007 C1orf167Q5SNV9 1468 aa13.45□□□□□ -0.26
RETREG3-207ENST00000589007 NEXMIFQ5QGS0 1516 aa13.44□□□□□ -0.26
RETREG3-207ENST00000589007 ATF3P18847 181 aa13.44□□□□□ -0.26
RETREG3-207ENST00000589007 NUTM2DQ5VT03 806 aaPredicted RBP13.44□□□□□ -0.26
RETREG3-207ENST00000589007 PRAG1Q86YV5 1406 aa13.44□□□□□ -0.26
RETREG3-207ENST00000589007 ABCA3Q99758 1704 aa13.44□□□□□ -0.26
RETREG3-207ENST00000589007 METP08581 1390 aa13.44□□□□□ -0.26
RETREG3-207ENST00000589007 FNBP4Q8N3X1 1017 aaPredicted RBP13.43□□□□□ -0.26
RETREG3-207ENST00000589007 PXDNQ92626 1479 aa13.42□□□□□ -0.26
RETREG3-207ENST00000589007 ZRANB1Q9UGI0 708 aa13.42□□□□□ -0.26
RETREG3-207ENST00000589007 AMOTL2Q9Y2J4 779 aa13.42□□□□□ -0.26
RETREG3-207ENST00000589007 ANKRD30AQ9BXX3 1397 aa13.42□□□□□ -0.26
RETREG3-207ENST00000589007 SOS2Q07890 1332 aaPredicted RBP13.41□□□□□ -0.26
RETREG3-207ENST00000589007 LRRC59Q96AG4 307 aaKnown RBP13.41□□□□□ -0.26
RETREG3-207ENST00000589007 PLCH1Q4KWH8 1693 aa13.4□□□□□ -0.26
RETREG3-207ENST00000589007 TNS1Q9HBL0 1735 aaKnown RBP13.4□□□□□ -0.26
RETREG3-207ENST00000589007 BLMP54132 1417 aaPredicted RBP13.39□□□□□ -0.27
RETREG3-207ENST00000589007 ANKRD50Q9ULJ7 1429 aa13.39□□□□□ -0.27
RETREG3-207ENST00000589007 CLTCL1P53675 1640 aa13.39□□□□□ -0.27
RETREG3-207ENST00000589007 C14orf37Q86TY3 774 aa13.39□□□□□ -0.27
RETREG3-207ENST00000589007 USP32Q8NFA0 1604 aa13.39□□□□□ -0.27
RETREG3-207ENST00000589007 SLIT2O94813 1529 aa13.39□□□□□ -0.27
RETREG3-207ENST00000589007 CDC42BPGQ6DT37 1551 aa13.38□□□□□ -0.27
RETREG3-207ENST00000589007 RALGAPBQ86X10 1494 aa13.38□□□□□ -0.27
RETREG3-207ENST00000589007 PPP1R15AO75807 674 aaPredicted RBP13.38□□□□□ -0.27
RETREG3-207ENST00000589007 NRAPQ86VF7 1730 aa13.37□□□□□ -0.27
RETREG3-207ENST00000589007 ADAMTS2O95450 1211 aa13.37□□□□□ -0.27
RETREG3-207ENST00000589007 BCANQ96GW7 911 aa13.37□□□□□ -0.27
RETREG3-207ENST00000589007 NGLY1Q96IV0 654 aa13.37□□□□□ -0.27
RETREG3-207ENST00000589007 USP21Q9UK80 565 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms