RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 MYO3AQ8NEV4 1616 aa20.6■□□□□ 0.89
NPC1-207ENST00000588867 SETD1BQ9UPS6 1966 aaKnown RBP20.6■□□□□ 0.89
NPC1-207ENST00000588867 NEXMIFQ5QGS0 1516 aa20.6■□□□□ 0.89
NPC1-207ENST00000588867 UBR1Q8IWV7 1749 aa20.6■□□□□ 0.89
NPC1-207ENST00000588867 MYOM2P54296 1465 aa20.59■□□□□ 0.89
NPC1-207ENST00000588867 SENP3Q9H4L4 574 aaPredicted RBP20.58■□□□□ 0.89
NPC1-207ENST00000588867 KDM5AP29375 1690 aaKnown RBP20.57■□□□□ 0.88
NPC1-207ENST00000588867 THEMISQ8N1K5 641 aaPredicted RBP20.57■□□□□ 0.88
NPC1-207ENST00000588867 RIMS2Q9UQ26 1411 aa20.57■□□□□ 0.88
NPC1-207ENST00000588867 HDGFP51858 240 aaKnown RBP20.56■□□□□ 0.88
NPC1-207ENST00000588867 NBPF1Q3BBV0 1214 aa20.55■□□□□ 0.88
NPC1-207ENST00000588867 CEP170BQ9Y4F5 1589 aaPredicted RBP20.55■□□□□ 0.88
NPC1-207ENST00000588867 ROCK2O75116 1388 aaKnown RBP20.55■□□□□ 0.88
NPC1-207ENST00000588867 RALGAPBQ86X10 1494 aa20.54■□□□□ 0.88
NPC1-207ENST00000588867 TMEM2Q9UHN6 1383 aa20.54■□□□□ 0.88
NPC1-207ENST00000588867 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.54■□□□□ 0.88
NPC1-207ENST00000588867 TRPM1Q7Z4N2 1603 aa20.54■□□□□ 0.88
NPC1-207ENST00000588867 CFAP70Q5T0N1 1121 aa20.53■□□□□ 0.88
NPC1-207ENST00000588867 CARD11Q9BXL7 1154 aa20.53■□□□□ 0.88
NPC1-207ENST00000588867 NRXN1Q9ULB1 1477 aa20.52■□□□□ 0.88
NPC1-207ENST00000588867 ZFYVE9O95405 1425 aa20.52■□□□□ 0.88
NPC1-207ENST00000588867 TXNDC2Q86VQ3 553 aa20.51■□□□□ 0.87
NPC1-207ENST00000588867 HIRIP3Q9BW71 556 aaPredicted RBP20.51■□□□□ 0.87
NPC1-207ENST00000588867 EID1Q9Y6B2 187 aa20.51■□□□□ 0.87
NPC1-207ENST00000588867 PIK3C2GO75747 1445 aa20.51■□□□□ 0.87
NPC1-207ENST00000588867 BCANQ96GW7 911 aa20.49■□□□□ 0.87
NPC1-207ENST00000588867 EIF4G2P78344 907 aaKnown RBP eCLIP20.49■□□□□ 0.87
NPC1-207ENST00000588867 C14orf93Q9H972 538 aaKnown RBP20.49■□□□□ 0.87
NPC1-207ENST00000588867 ZNF142P52746 1687 aaPredicted RBP20.48■□□□□ 0.87
NPC1-207ENST00000588867 ZNF316A6NFI3 1004 aaPredicted RBP20.48■□□□□ 0.87
NPC1-207ENST00000588867 LTKP29376 864 aa20.48■□□□□ 0.87
NPC1-207ENST00000588867 HSPA5P11021 654 aaKnown RBP20.46■□□□□ 0.87
NPC1-207ENST00000588867 KIAA1210Q9ULL0 1709 aa20.46■□□□□ 0.87
NPC1-207ENST00000588867 SLIT1O75093 1534 aa20.46■□□□□ 0.87
NPC1-207ENST00000588867 ARHGAP23Q9P227 1491 aa20.45■□□□□ 0.86
NPC1-207ENST00000588867 TMEM132EQ6IEE7 984 aa20.44■□□□□ 0.86
NPC1-207ENST00000588867 GPRASP1Q5JY77 1395 aa20.44■□□□□ 0.86
NPC1-207ENST00000588867 USP47Q96K76 1375 aa20.43■□□□□ 0.86
NPC1-207ENST00000588867 ANKLE2Q86XL3 938 aa20.43■□□□□ 0.86
NPC1-207ENST00000588867 SCAF11Q99590 1463 aaKnown RBP20.4■□□□□ 0.86
NPC1-207ENST00000588867 LAMC1P11047 1609 aa20.4■□□□□ 0.86
NPC1-207ENST00000588867 ALKQ9UM73 1620 aa20.4■□□□□ 0.86
NPC1-207ENST00000588867 PLEKHG1Q9ULL1 1385 aa20.39■□□□□ 0.86
NPC1-207ENST00000588867 SETBP1Q9Y6X0 1596 aa20.38■□□□□ 0.85
NPC1-207ENST00000588867 ST20-MTHFSA0A0A6YYL1 179 aa20.37■□□□□ 0.85
NPC1-207ENST00000588867 IQGAP1P46940 1657 aa20.37■□□□□ 0.85
NPC1-207ENST00000588867 NRXN3Q9Y4C0 1643 aa20.36■□□□□ 0.85
NPC1-207ENST00000588867 SLC26A8Q96RN1 970 aa20.36■□□□□ 0.85
NPC1-207ENST00000588867 STK26Q9P289 416 aa20.36■□□□□ 0.85
NPC1-207ENST00000588867 TRAK1Q9UPV9 953 aa20.36■□□□□ 0.85
NPC1-207ENST00000588867 ADGRB1O14514 1584 aa20.36■□□□□ 0.85
NPC1-207ENST00000588867 HSPA2P54652 639 aa20.36■□□□□ 0.85
NPC1-207ENST00000588867 NCKAP5LQ9HCH0 1330 aa20.34■□□□□ 0.85
NPC1-207ENST00000588867 ADAMTS13Q76LX8 1427 aa20.33■□□□□ 0.84
NPC1-207ENST00000588867 ASXL1Q8IXJ9 1541 aa20.32■□□□□ 0.84
NPC1-207ENST00000588867 METP08581 1390 aa20.32■□□□□ 0.84
NPC1-207ENST00000588867 EIF3AQ14152 1382 aaKnown RBP20.32■□□□□ 0.84
NPC1-207ENST00000588867 SETD1AO15047 1707 aaKnown RBP20.31■□□□□ 0.84
NPC1-207ENST00000588867 LMTK3Q96Q04 1460 aa20.31■□□□□ 0.84
NPC1-207ENST00000588867 YTHDC2Q9H6S0 1430 aaKnown RBP20.3■□□□□ 0.84
NPC1-207ENST00000588867 TBX22Q9Y458 520 aa20.3■□□□□ 0.84
NPC1-207ENST00000588867 POLR1AO95602 1720 aaPredicted RBP20.29■□□□□ 0.84
NPC1-207ENST00000588867 NPHP4O75161 1426 aaPredicted RBP20.28■□□□□ 0.84
NPC1-207ENST00000588867 MED14O60244 1454 aa20.27■□□□□ 0.84
NPC1-207ENST00000588867 C11orf95C9JLR9 678 aaPredicted RBP20.26■□□□□ 0.83
NPC1-207ENST00000588867 LRPPRCP42704 1394 aaKnown RBP20.26■□□□□ 0.83
NPC1-207ENST00000588867 CENPJQ9HC77 1338 aaPredicted RBP20.25■□□□□ 0.83
NPC1-207ENST00000588867 TESK2Q96S53 571 aa20.25■□□□□ 0.83
NPC1-207ENST00000588867 SAFB2Q14151 953 aaKnown RBP eCLIP20.24■□□□□ 0.83
NPC1-207ENST00000588867 POLR3GLQ9BT43 218 aa20.24■□□□□ 0.83
NPC1-207ENST00000588867 POGKQ9P215 609 aa20.24■□□□□ 0.83
NPC1-207ENST00000588867 DIP2AQ14689 1571 aa20.24■□□□□ 0.83
NPC1-207ENST00000588867 ABCC11Q96J66 1382 aa20.23■□□□□ 0.83
NPC1-207ENST00000588867 PRAM1Q96QH2 718 aa20.23■□□□□ 0.83
NPC1-207ENST00000588867 ARHGEF28Q8N1W1 1705 aaKnown RBP20.23■□□□□ 0.83
NPC1-207ENST00000588867 WASHC2AQ641Q2 1341 aa20.22■□□□□ 0.83
NPC1-207ENST00000588867 TMF1P82094 1093 aa20.22■□□□□ 0.83
NPC1-207ENST00000588867 AMOTL2Q9Y2J4 779 aa20.22■□□□□ 0.83
NPC1-207ENST00000588867 WAPLQ7Z5K2 1190 aa20.2■□□□□ 0.83
NPC1-207ENST00000588867 KIF7Q2M1P5 1343 aa20.2■□□□□ 0.82
NPC1-207ENST00000588867 PTPRUQ92729 1446 aa20.2■□□□□ 0.82
NPC1-207ENST00000588867 CCDC7Q96M83 1385 aa20.19■□□□□ 0.82
NPC1-207ENST00000588867 DDX10Q13206 875 aaKnown RBP20.19■□□□□ 0.82
NPC1-207ENST00000588867 QRICH2Q9H0J4 1663 aa20.18■□□□□ 0.82
NPC1-207ENST00000588867 SLC24A1O60721 1099 aa20.17■□□□□ 0.82
NPC1-207ENST00000588867 DLC1Q96QB1 1528 aa20.17■□□□□ 0.82
NPC1-207ENST00000588867 PIK3R4Q99570 1358 aa20.17■□□□□ 0.82
NPC1-207ENST00000588867 DISP3Q9P2K9 1392 aa20.17■□□□□ 0.82
NPC1-207ENST00000588867 PLEKHH1Q9ULM0 1364 aa20.16■□□□□ 0.82
NPC1-207ENST00000588867 MINK1Q8N4C8 1332 aaPredicted RBP20.16■□□□□ 0.82
NPC1-207ENST00000588867 TECPR2O15040 1411 aa20.16■□□□□ 0.82
NPC1-207ENST00000588867 KNDC1Q76NI1 1749 aa20.16■□□□□ 0.82
NPC1-207ENST00000588867 SIRT1Q96EB6 747 aa20.15■□□□□ 0.82
NPC1-207ENST00000588867 STRCQ7RTU9 1775 aa20.15■□□□□ 0.82
NPC1-207ENST00000588867 ROBO2Q9HCK4 1378 aa20.15■□□□□ 0.82
NPC1-207ENST00000588867 KCNA6P17658 529 aa20.15■□□□□ 0.82
NPC1-207ENST00000588867 SBNO2Q9Y2G9 1366 aa20.14■□□□□ 0.82
NPC1-207ENST00000588867 DIEXFQ68CQ4 756 aaKnown RBP20.14■□□□□ 0.81
NPC1-207ENST00000588867 CPS1P31327 1500 aa20.13■□□□□ 0.81
NPC1-207ENST00000588867 CDCA8Q53HL2 280 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms