RNA–Protein interactions for RNA: ENST00000588858.5

C19orf53-204, Transcript of chromosome 19 open reading frame 53, humanhuman

TSL 3

Gene C19orf53, Length 666 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf53-204ENST00000588858 SCAF11Q99590 1463 aaKnown RBP11.75□□□□□ -0.53
C19orf53-204ENST00000588858 ANKLE2Q86XL3 938 aa11.74□□□□□ -0.53
C19orf53-204ENST00000588858 PLEKHG1Q9ULL1 1385 aa11.74□□□□□ -0.53
C19orf53-204ENST00000588858 IFT172Q9UG01 1749 aa11.74□□□□□ -0.53
C19orf53-204ENST00000588858 VGFO15240 615 aaPredicted RBP11.73□□□□□ -0.53
C19orf53-204ENST00000588858 CCER1Q8TC90 406 aaPredicted RBP11.73□□□□□ -0.53
C19orf53-204ENST00000588858 EID1Q9Y6B2 187 aa11.73□□□□□ -0.53
C19orf53-204ENST00000588858 MYO5BQ9ULV0 1848 aa11.72□□□□□ -0.53
C19orf53-204ENST00000588858 PPLO60437 1756 aa11.72□□□□□ -0.53
C19orf53-204ENST00000588858 LTKP29376 864 aa11.72□□□□□ -0.53
C19orf53-204ENST00000588858 SETBP1Q9Y6X0 1596 aa11.71□□□□□ -0.53
C19orf53-204ENST00000588858 CHGAP10645 457 aaKnown RBP11.71□□□□□ -0.53
C19orf53-204ENST00000588858 TXNDC2Q86VQ3 553 aa11.71□□□□□ -0.53
C19orf53-204ENST00000588858 SIN3AQ96ST3 1273 aa11.71□□□□□ -0.53
C19orf53-204ENST00000588858 DMRT2Q9Y5R5 561 aa11.71□□□□□ -0.53
C19orf53-204ENST00000588858 POLR1AO95602 1720 aaPredicted RBP11.71□□□□□ -0.54
C19orf53-204ENST00000588858 STRCQ7RTU9 1775 aa11.7□□□□□ -0.54
C19orf53-204ENST00000588858 HSPA2P54652 639 aa11.7□□□□□ -0.54
C19orf53-204ENST00000588858 ZNF326Q5BKZ1 582 aaKnown RBP11.7□□□□□ -0.54
C19orf53-204ENST00000588858 DIP2AQ14689 1571 aa11.7□□□□□ -0.54
C19orf53-204ENST00000588858 NPHP4O75161 1426 aaPredicted RBP11.69□□□□□ -0.54
C19orf53-204ENST00000588858 PIK3C2GO75747 1445 aa11.69□□□□□ -0.54
C19orf53-204ENST00000588858 PIK3R4Q99570 1358 aa11.68□□□□□ -0.54
C19orf53-204ENST00000588858 RGL3Q3MIN7 710 aa11.68□□□□□ -0.54
C19orf53-204ENST00000588858 L3MBTL2Q969R5 705 aa11.68□□□□□ -0.54
C19orf53-204ENST00000588858 TBX22Q9Y458 520 aa11.68□□□□□ -0.54
C19orf53-204ENST00000588858 ADAMTS13Q76LX8 1427 aa11.68□□□□□ -0.54
C19orf53-204ENST00000588858 PRAG1Q86YV5 1406 aa11.68□□□□□ -0.54
C19orf53-204ENST00000588858 TONSLQ96HA7 1378 aa11.67□□□□□ -0.54
C19orf53-204ENST00000588858 NRXN3Q9Y4C0 1643 aa11.67□□□□□ -0.54
C19orf53-204ENST00000588858 ADGRF5Q8IZF2 1346 aa11.66□□□□□ -0.54
C19orf53-204ENST00000588858 IQGAP1P46940 1657 aa11.66□□□□□ -0.54
C19orf53-204ENST00000588858 DCAF11Q8TEB1 546 aa11.66□□□□□ -0.54
C19orf53-204ENST00000588858 LAMC1P11047 1609 aa11.66□□□□□ -0.54
C19orf53-204ENST00000588858 NCKAP5LQ9HCH0 1330 aa11.65□□□□□ -0.54
C19orf53-204ENST00000588858 PPP1R15AO75807 674 aaPredicted RBP11.65□□□□□ -0.54
C19orf53-204ENST00000588858 NEUROD1Q13562 356 aa11.65□□□□□ -0.54
C19orf53-204ENST00000588858 C14orf93Q9H972 538 aaKnown RBP11.65□□□□□ -0.54
C19orf53-204ENST00000588858 KIAA1210Q9ULL0 1709 aa11.65□□□□□ -0.54
C19orf53-204ENST00000588858 GPRASP1Q5JY77 1395 aa11.63□□□□□ -0.55
C19orf53-204ENST00000588858 ALKQ9UM73 1620 aa11.63□□□□□ -0.55
C19orf53-204ENST00000588858 SETD1AO15047 1707 aaKnown RBP11.63□□□□□ -0.55
C19orf53-204ENST00000588858 TECPR2O15040 1411 aa11.61□□□□□ -0.55
C19orf53-204ENST00000588858 ADGRB1O14514 1584 aa11.61□□□□□ -0.55
C19orf53-204ENST00000588858 NWD1Q149M9 1564 aa11.61□□□□□ -0.55
C19orf53-204ENST00000588858 SIRT1Q96EB6 747 aa11.6□□□□□ -0.55
C19orf53-204ENST00000588858 NKTRP30414 1462 aaKnown RBP11.59□□□□□ -0.55
C19orf53-204ENST00000588858 RALGAPBQ86X10 1494 aa11.59□□□□□ -0.55
C19orf53-204ENST00000588858 ABCC11Q96J66 1382 aa11.59□□□□□ -0.55
C19orf53-204ENST00000588858 KCNA6P17658 529 aa11.59□□□□□ -0.55
C19orf53-204ENST00000588858 NUTM2DQ5VT03 806 aaPredicted RBP11.59□□□□□ -0.55
C19orf53-204ENST00000588858 ASXL1Q8IXJ9 1541 aa11.59□□□□□ -0.55
C19orf53-204ENST00000588858 METP08581 1390 aa11.58□□□□□ -0.56
C19orf53-204ENST00000588858 LRPPRCP42704 1394 aaKnown RBP11.58□□□□□ -0.56
C19orf53-204ENST00000588858 NBPF8Q3BBV2 869 aa11.58□□□□□ -0.56
C19orf53-204ENST00000588858 KDM2AQ9Y2K7 1162 aa11.58□□□□□ -0.56
C19orf53-204ENST00000588858 PTCH1Q13635 1447 aa11.58□□□□□ -0.56
C19orf53-204ENST00000588858 NCOA3Q9Y6Q9 1424 aa11.58□□□□□ -0.56
C19orf53-204ENST00000588858 TRPM1Q7Z4N2 1603 aa11.57□□□□□ -0.56
C19orf53-204ENST00000588858 DLC1Q96QB1 1528 aa11.57□□□□□ -0.56
C19orf53-204ENST00000588858 CFAP70Q5T0N1 1121 aa11.57□□□□□ -0.56
C19orf53-204ENST00000588858 SLC26A8Q96RN1 970 aa11.57□□□□□ -0.56
C19orf53-204ENST00000588858 CHD2O14647 1828 aaKnown RBP11.57□□□□□ -0.56
C19orf53-204ENST00000588858 PTPRUQ92729 1446 aa11.57□□□□□ -0.56
C19orf53-204ENST00000588858 XRN1Q8IZH2 1706 aaKnown RBP11.57□□□□□ -0.56
C19orf53-204ENST00000588858 CPS1P31327 1500 aa11.56□□□□□ -0.56
C19orf53-204ENST00000588858 FAM135BQ49AJ0 1406 aa11.56□□□□□ -0.56
C19orf53-204ENST00000588858 YTHDC2Q9H6S0 1430 aaKnown RBP11.56□□□□□ -0.56
C19orf53-204ENST00000588858 KNDC1Q76NI1 1749 aa11.55□□□□□ -0.56
C19orf53-204ENST00000588858 ZEB1P37275 1124 aaPredicted RBP11.55□□□□□ -0.56
C19orf53-204ENST00000588858 LTBP4Q8N2S1 1624 aa11.55□□□□□ -0.56
C19orf53-204ENST00000588858 BCANQ96GW7 911 aa11.54□□□□□ -0.56
C19orf53-204ENST00000588858 IQSEC2Q5JU85 1478 aa11.53□□□□□ -0.56
C19orf53-204ENST00000588858 AMOTL2Q9Y2J4 779 aa11.53□□□□□ -0.56
C19orf53-204ENST00000588858 NBPF1Q3BBV0 1214 aa11.52□□□□□ -0.57
C19orf53-204ENST00000588858 ZNF335Q9H4Z2 1342 aaPredicted RBP11.52□□□□□ -0.57
C19orf53-204ENST00000588858 ROCK2O75116 1388 aaKnown RBP11.52□□□□□ -0.57
C19orf53-204ENST00000588858 SBNO2Q9Y2G9 1366 aa11.51□□□□□ -0.57
C19orf53-204ENST00000588858 LRRC7Q96NW7 1537 aa11.5□□□□□ -0.57
C19orf53-204ENST00000588858 STRCP1A6NGW2 1772 aa11.5□□□□□ -0.57
C19orf53-204ENST00000588858 TMEM132EQ6IEE7 984 aa11.5□□□□□ -0.57
C19orf53-204ENST00000588858 ROBO2Q9HCK4 1378 aa11.5□□□□□ -0.57
C19orf53-204ENST00000588858 EIF3AQ14152 1382 aaKnown RBP11.49□□□□□ -0.57
C19orf53-204ENST00000588858 DCCP43146 1447 aa11.49□□□□□ -0.57
C19orf53-204ENST00000588858 SLC24A1O60721 1099 aa11.48□□□□□ -0.57
C19orf53-204ENST00000588858 CARD11Q9BXL7 1154 aa11.48□□□□□ -0.57
C19orf53-204ENST00000588858 ARHGEF28Q8N1W1 1705 aaKnown RBP11.47□□□□□ -0.57
C19orf53-204ENST00000588858 ADGRL3Q9HAR2 1447 aa11.47□□□□□ -0.57
C19orf53-204ENST00000588858 TMEM94Q12767 1356 aa11.47□□□□□ -0.57
C19orf53-204ENST00000588858 ADGRB2O60241 1585 aa11.46□□□□□ -0.57
C19orf53-204ENST00000588858 CENPJQ9HC77 1338 aaPredicted RBP11.45□□□□□ -0.58
C19orf53-204ENST00000588858 PROSER2Q86WR7 435 aaPredicted RBP11.45□□□□□ -0.58
C19orf53-204ENST00000588858 TRAK1Q9UPV9 953 aa11.45□□□□□ -0.58
C19orf53-204ENST00000588858 PRAM1Q96QH2 718 aa11.44□□□□□ -0.58
C19orf53-204ENST00000588858 C19orf44Q9H6X5 657 aa11.44□□□□□ -0.58
C19orf53-204ENST00000588858 STK26Q9P289 416 aa11.44□□□□□ -0.58
C19orf53-204ENST00000588858 CDC42BPGQ6DT37 1551 aa11.44□□□□□ -0.58
C19orf53-204ENST00000588858 USP47Q96K76 1375 aa11.43□□□□□ -0.58
C19orf53-204ENST00000588858 PUS7Q96PZ0 661 aaKnown RBP11.43□□□□□ -0.58
C19orf53-204ENST00000588858 SENP3Q9H4L4 574 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms