RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 CD109Q6YHK3 1445 aa9.59□□□□□ -0.87
SPIDR-228ENST00000588781 SCAF11Q99590 1463 aaKnown RBP9.59□□□□□ -0.87
SPIDR-228ENST00000588781 VWDEQ8N2E2 1590 aa9.58□□□□□ -0.88
SPIDR-228ENST00000588781 RNF123Q5XPI4 1314 aa9.58□□□□□ -0.88
SPIDR-228ENST00000588781 MADDQ8WXG6 1647 aa9.58□□□□□ -0.88
SPIDR-228ENST00000588781 RBM19Q9Y4C8 960 aaKnown RBP9.58□□□□□ -0.88
SPIDR-228ENST00000588781 MYT1LQ9UL68 1186 aa9.57□□□□□ -0.88
SPIDR-228ENST00000588781 IQGAP1P46940 1657 aa9.56□□□□□ -0.88
SPIDR-228ENST00000588781 SPATA31D1Q6ZQQ2 1576 aa9.56□□□□□ -0.88
SPIDR-228ENST00000588781 MYOM2P54296 1465 aa9.56□□□□□ -0.88
SPIDR-228ENST00000588781 ZNF518AQ6AHZ1 1483 aa9.56□□□□□ -0.88
SPIDR-228ENST00000588781 NBPF1Q3BBV0 1214 aa9.56□□□□□ -0.88
SPIDR-228ENST00000588781 TESK2Q96S53 571 aa9.56□□□□□ -0.88
SPIDR-228ENST00000588781 LMTK2Q8IWU2 1503 aa9.56□□□□□ -0.88
SPIDR-228ENST00000588781 FANCIQ9NVI1 1328 aa9.56□□□□□ -0.88
SPIDR-228ENST00000588781 SYNMO15061 1565 aa9.55□□□□□ -0.88
SPIDR-228ENST00000588781 ANP32EQ9BTT0 268 aa9.55□□□□□ -0.88
SPIDR-228ENST00000588781 KNSTRNQ9Y448 316 aa9.55□□□□□ -0.88
SPIDR-228ENST00000588781 NPC1L1Q9UHC9 1359 aa9.54□□□□□ -0.88
SPIDR-228ENST00000588781 CLTCL1P53675 1640 aa9.54□□□□□ -0.88
SPIDR-228ENST00000588781 PER1O15534 1290 aaPredicted RBP9.54□□□□□ -0.88
SPIDR-228ENST00000588781 IRX6P78412 446 aaPredicted RBP9.54□□□□□ -0.88
SPIDR-228ENST00000588781 AFAP1Q8N556 730 aa9.54□□□□□ -0.88
SPIDR-228ENST00000588781 EFCAB6Q5THR3 1501 aa9.53□□□□□ -0.88
SPIDR-228ENST00000588781 KIF3BO15066 747 aa9.53□□□□□ -0.88
SPIDR-228ENST00000588781 PANK3Q9H999 370 aa9.53□□□□□ -0.88
SPIDR-228ENST00000588781 KIF1BO60333 1816 aa9.52□□□□□ -0.89
SPIDR-228ENST00000588781 BLMP54132 1417 aaPredicted RBP9.52□□□□□ -0.89
SPIDR-228ENST00000588781 CNGB1Q14028 1251 aaPredicted RBP9.52□□□□□ -0.89
SPIDR-228ENST00000588781 ERICH6Q7L0X2 663 aa9.52□□□□□ -0.89
SPIDR-228ENST00000588781 NGEFQ8N5V2 710 aa9.52□□□□□ -0.89
SPIDR-228ENST00000588781 CCDC136Q96JN2 1154 aa9.52□□□□□ -0.89
SPIDR-228ENST00000588781 HSPA2P54652 639 aa9.51□□□□□ -0.89
SPIDR-228ENST00000588781 RIMS1Q86UR5 1692 aaKnown RBP9.51□□□□□ -0.89
SPIDR-228ENST00000588781 RPGRIP1LQ68CZ1 1315 aa9.51□□□□□ -0.89
SPIDR-228ENST00000588781 WDR43Q15061 677 aaKnown RBP eCLIP9.5□□□□□ -0.89
SPIDR-228ENST00000588781 RCAN3Q9UKA8 241 aa9.5□□□□□ -0.89
SPIDR-228ENST00000588781 MLH3Q9UHC1 1453 aa9.5□□□□□ -0.89
SPIDR-228ENST00000588781 KDM5AP29375 1690 aaKnown RBP9.5□□□□□ -0.89
SPIDR-228ENST00000588781 ASXL1Q8IXJ9 1541 aa9.5□□□□□ -0.89
SPIDR-228ENST00000588781 SBNO2Q9Y2G9 1366 aa9.5□□□□□ -0.89
SPIDR-228ENST00000588781 PIK3C2GO75747 1445 aa9.49□□□□□ -0.89
SPIDR-228ENST00000588781 NEO1Q92859 1461 aa9.49□□□□□ -0.89
SPIDR-228ENST00000588781 RRP1P56182 461 aaKnown RBP9.49□□□□□ -0.89
SPIDR-228ENST00000588781 SETBP1Q9Y6X0 1596 aa9.49□□□□□ -0.89
SPIDR-228ENST00000588781 MROH1Q8NDA8 1641 aa9.49□□□□□ -0.89
SPIDR-228ENST00000588781 POGZQ7Z3K3 1410 aa9.48□□□□□ -0.89
SPIDR-228ENST00000588781 KIDINS220Q9ULH0 1771 aa9.48□□□□□ -0.89
SPIDR-228ENST00000588781 CC2D1BQ5T0F9 858 aaKnown RBP9.48□□□□□ -0.89
SPIDR-228ENST00000588781 B4GALNT3Q6L9W6 998 aa9.48□□□□□ -0.89
SPIDR-228ENST00000588781 FRMPD1Q5SYB0 1578 aa9.47□□□□□ -0.89
SPIDR-228ENST00000588781 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.47□□□□□ -0.89
SPIDR-228ENST00000588781 NRXN1Q9ULB1 1477 aa9.47□□□□□ -0.89
SPIDR-228ENST00000588781 MYO3AQ8NEV4 1616 aa9.46□□□□□ -0.89
SPIDR-228ENST00000588781 IFT172Q9UG01 1749 aa9.46□□□□□ -0.89
SPIDR-228ENST00000588781 PUS7Q96PZ0 661 aaKnown RBP9.46□□□□□ -0.9
SPIDR-228ENST00000588781 ADGRB3O60242 1522 aa9.46□□□□□ -0.9
SPIDR-228ENST00000588781 RAPGEF3O95398 923 aa9.45□□□□□ -0.9
SPIDR-228ENST00000588781 PPP2R1AP30153 589 aa9.45□□□□□ -0.9
SPIDR-228ENST00000588781 ABCA6Q8N139 1617 aa9.45□□□□□ -0.9
SPIDR-228ENST00000588781 TCERG1O14776 1098 aaKnown RBP9.44□□□□□ -0.9
SPIDR-228ENST00000588781 AMER1Q5JTC6 1135 aaPredicted RBP9.44□□□□□ -0.9
SPIDR-228ENST00000588781 ARHGEF40Q8TER5 1519 aa9.44□□□□□ -0.9
SPIDR-228ENST00000588781 STRCQ7RTU9 1775 aa9.44□□□□□ -0.9
SPIDR-228ENST00000588781 ZC3H13Q5T200 1668 aaKnown RBP9.43□□□□□ -0.9
SPIDR-228ENST00000588781 CENPJQ9HC77 1338 aaPredicted RBP9.43□□□□□ -0.9
SPIDR-228ENST00000588781 MS4A1P11836 297 aa9.42□□□□□ -0.9
SPIDR-228ENST00000588781 ANP32AP39687 249 aaKnown RBP9.42□□□□□ -0.9
SPIDR-228ENST00000588781 MYOM1P52179 1685 aa9.42□□□□□ -0.9
SPIDR-228ENST00000588781 ERVK-7P63135 1459 aa9.41□□□□□ -0.9
SPIDR-228ENST00000588781 ARHGAP31Q2M1Z3 1444 aa9.41□□□□□ -0.9
SPIDR-228ENST00000588781 YEATS2Q9ULM3 1422 aa9.41□□□□□ -0.9
SPIDR-228ENST00000588781 VGFO15240 615 aaPredicted RBP9.41□□□□□ -0.9
SPIDR-228ENST00000588781 GOLGA2Q08379 1002 aa9.41□□□□□ -0.9
SPIDR-228ENST00000588781 CFAP70Q5T0N1 1121 aa9.41□□□□□ -0.9
SPIDR-228ENST00000588781 RICTORQ6R327 1708 aa9.41□□□□□ -0.9
SPIDR-228ENST00000588781 SIGLEC1Q9BZZ2 1709 aa9.41□□□□□ -0.9
SPIDR-228ENST00000588781 PREX1Q8TCU6 1659 aa9.41□□□□□ -0.9
SPIDR-228ENST00000588781 ABCC3O15438 1527 aa9.41□□□□□ -0.9
SPIDR-228ENST00000588781 NOS1P29475 1434 aa9.4□□□□□ -0.9
SPIDR-228ENST00000588781 PPLO60437 1756 aa9.4□□□□□ -0.9
SPIDR-228ENST00000588781 CHGAP10645 457 aaKnown RBP9.4□□□□□ -0.9
SPIDR-228ENST00000588781 C14orf93Q9H972 538 aaKnown RBP9.4□□□□□ -0.9
SPIDR-228ENST00000588781 DMRT2Q9Y5R5 561 aa9.4□□□□□ -0.9
SPIDR-228ENST00000588781 NPATQ14207 1427 aa9.39□□□□□ -0.91
SPIDR-228ENST00000588781 NSD2O96028 1365 aa9.39□□□□□ -0.91
SPIDR-228ENST00000588781 NINLQ9Y2I6 1382 aa9.39□□□□□ -0.91
SPIDR-228ENST00000588781 MROH2AA6NES4 1674 aa9.39□□□□□ -0.91
SPIDR-228ENST00000588781 CAMSAP1Q5T5Y3 1602 aa9.39□□□□□ -0.91
SPIDR-228ENST00000588781 ADGRF5Q8IZF2 1346 aa9.39□□□□□ -0.91
SPIDR-228ENST00000588781 SLC52A1Q9NWF4 448 aa9.39□□□□□ -0.91
SPIDR-228ENST00000588781 ADAMTS8Q9UP79 889 aa9.39□□□□□ -0.91
SPIDR-228ENST00000588781 FER1L4A9Z1Z3 1794 aa9.39□□□□□ -0.91
SPIDR-228ENST00000588781 IQSEC2Q5JU85 1478 aa9.39□□□□□ -0.91
SPIDR-228ENST00000588781 POLR3AO14802 1390 aaPredicted RBP9.38□□□□□ -0.91
SPIDR-228ENST00000588781 USP32Q8NFA0 1604 aa9.38□□□□□ -0.91
SPIDR-228ENST00000588781 NCBP3Q53F19 620 aaKnown RBP9.38□□□□□ -0.91
SPIDR-228ENST00000588781 GGT6Q6P531 493 aa9.38□□□□□ -0.91
SPIDR-228ENST00000588781 CFAP53Q96M91 514 aa9.38□□□□□ -0.91
SPIDR-228ENST00000588781 SALL2Q9Y467 1007 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms