RNA–Protein interactions for RNA: ENST00000588680.1

NFIX-211, Transcript of nuclear factor I X, humanhuman

TSL 5

Gene NFIX, Length 319 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-211ENST00000588680 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.33□□□□□ -0.44
NFIX-211ENST00000588680 NOS1P29475 1434 aa12.32□□□□□ -0.44
NFIX-211ENST00000588680 IDI1Q13907 227 aa12.32□□□□□ -0.44
NFIX-211ENST00000588680 DAPK1P53355 1430 aa12.31□□□□□ -0.44
NFIX-211ENST00000588680 FGD6Q6ZV73 1430 aa12.31□□□□□ -0.44
NFIX-211ENST00000588680 RRP7BPQ9NSQ0 103 aa12.31□□□□□ -0.44
NFIX-211ENST00000588680 SLAIN2Q9P270 581 aa12.31□□□□□ -0.44
NFIX-211ENST00000588680 ZFYVE9O95405 1425 aa12.3□□□□□ -0.44
NFIX-211ENST00000588680 UPF1Q92900 1129 aaKnown RBP eCLIP12.3□□□□□ -0.44
NFIX-211ENST00000588680 TRIM52Q96A61 297 aa12.3□□□□□ -0.44
NFIX-211ENST00000588680 DIP2AQ14689 1571 aa12.3□□□□□ -0.44
NFIX-211ENST00000588680 KANK4Q5T7N3 995 aaPredicted RBP12.29□□□□□ -0.44
NFIX-211ENST00000588680 MEX3CQ5U5Q3 659 aaKnown RBP12.29□□□□□ -0.44
NFIX-211ENST00000588680 SPATA31A6Q5VVP1 1343 aa12.29□□□□□ -0.44
NFIX-211ENST00000588680 SRCAPQ6ZRS2 3230 aa12.29□□□□□ -0.44
NFIX-211ENST00000588680 TMEM131LA2VDJ0 1609 aa12.29□□□□□ -0.44
NFIX-211ENST00000588680 PLEKHG1Q9ULL1 1385 aa12.29□□□□□ -0.44
NFIX-211ENST00000588680 BCANQ96GW7 911 aa12.28□□□□□ -0.44
NFIX-211ENST00000588680 ZNF772Q68DY9 489 aaPredicted RBP12.27□□□□□ -0.45
NFIX-211ENST00000588680 RIMS2Q9UQ26 1411 aa12.27□□□□□ -0.45
NFIX-211ENST00000588680 CDK12Q9NYV4 1490 aaPredicted RBP12.27□□□□□ -0.45
NFIX-211ENST00000588680 RPRD2Q5VT52 1461 aaKnown RBP12.26□□□□□ -0.45
NFIX-211ENST00000588680 NCOA3Q9Y6Q9 1424 aa12.25□□□□□ -0.45
NFIX-211ENST00000588680 NHSL1Q5SYE7 1610 aa12.25□□□□□ -0.45
NFIX-211ENST00000588680 PPP1R15AO75807 674 aaPredicted RBP12.24□□□□□ -0.45
NFIX-211ENST00000588680 C14orf37Q86TY3 774 aa12.24□□□□□ -0.45
NFIX-211ENST00000588680 ANKRD30AQ9BXX3 1397 aa12.24□□□□□ -0.45
NFIX-211ENST00000588680 ASXL1Q8IXJ9 1541 aa12.23□□□□□ -0.45
NFIX-211ENST00000588680 ADAMTS13Q76LX8 1427 aa12.23□□□□□ -0.45
NFIX-211ENST00000588680 SLC52A1Q9NWF4 448 aa12.23□□□□□ -0.45
NFIX-211ENST00000588680 RGS12O14924 1447 aa12.22□□□□□ -0.45
NFIX-211ENST00000588680 RXRBP28702 533 aa12.22□□□□□ -0.45
NFIX-211ENST00000588680 XRN1Q8IZH2 1706 aaKnown RBP12.22□□□□□ -0.45
NFIX-211ENST00000588680 E9PCH4 1651 aa12.22□□□□□ -0.45
NFIX-211ENST00000588680 UNC13BO14795 1591 aa12.22□□□□□ -0.45
NFIX-211ENST00000588680 TRPM2O94759 1503 aa12.21□□□□□ -0.45
NFIX-211ENST00000588680 ADGRL2O95490 1459 aa12.21□□□□□ -0.45
NFIX-211ENST00000588680 CHIC2Q9UKJ5 165 aa12.21□□□□□ -0.45
NFIX-211ENST00000588680 AFF2P51816 1311 aa12.2□□□□□ -0.46
NFIX-211ENST00000588680 NUTM2BA6NNL0 878 aaPredicted RBP12.2□□□□□ -0.46
NFIX-211ENST00000588680 NUTM2EB1AL46 878 aaPredicted RBP12.2□□□□□ -0.46
NFIX-211ENST00000588680 CADPS2Q86UW7 1296 aa12.2□□□□□ -0.46
NFIX-211ENST00000588680 NUTM2AQ8IVF1 878 aaPredicted RBP12.2□□□□□ -0.46
NFIX-211ENST00000588680 NRXN3Q9Y4C0 1643 aa12.19□□□□□ -0.46
NFIX-211ENST00000588680 ATF3P18847 181 aa12.19□□□□□ -0.46
NFIX-211ENST00000588680 TBX22Q9Y458 520 aa12.19□□□□□ -0.46
NFIX-211ENST00000588680 BRINP3Q76B58 766 aa12.18□□□□□ -0.46
NFIX-211ENST00000588680 DCCP43146 1447 aa12.18□□□□□ -0.46
NFIX-211ENST00000588680 PIK3R4Q99570 1358 aa12.18□□□□□ -0.46
NFIX-211ENST00000588680 NALCNQ8IZF0 1738 aa12.17□□□□□ -0.46
NFIX-211ENST00000588680 C19orf44Q9H6X5 657 aa12.17□□□□□ -0.46
NFIX-211ENST00000588680 PTPRUQ92729 1446 aa12.17□□□□□ -0.46
NFIX-211ENST00000588680 SETD5Q9C0A6 1442 aa12.17□□□□□ -0.46
NFIX-211ENST00000588680 ANKRD50Q9ULJ7 1429 aa12.17□□□□□ -0.46
NFIX-211ENST00000588680 NUTM2DQ5VT03 806 aaPredicted RBP12.16□□□□□ -0.46
NFIX-211ENST00000588680 MST1RQ04912 1400 aa12.16□□□□□ -0.46
NFIX-211ENST00000588680 EP400Q96L91 3159 aa12.16□□□□□ -0.46
NFIX-211ENST00000588680 IQGAP3Q86VI3 1631 aa12.15□□□□□ -0.46
NFIX-211ENST00000588680 HDGFP51858 240 aaKnown RBP12.15□□□□□ -0.46
NFIX-211ENST00000588680 SETBP1Q9Y6X0 1596 aa12.14□□□□□ -0.47
NFIX-211ENST00000588680 CHGAP10645 457 aaKnown RBP12.14□□□□□ -0.47
NFIX-211ENST00000588680 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.14□□□□□ -0.47
NFIX-211ENST00000588680 PNPLA6Q8IY17 1366 aa12.14□□□□□ -0.47
NFIX-211ENST00000588680 C8orf37Q96NL8 207 aa12.13□□□□□ -0.47
NFIX-211ENST00000588680 LAMC1P11047 1609 aa12.12□□□□□ -0.47
NFIX-211ENST00000588680 AMOTL2Q9Y2J4 779 aa12.12□□□□□ -0.47
NFIX-211ENST00000588680 SPHKAPQ2M3C7 1700 aa12.11□□□□□ -0.47
NFIX-211ENST00000588680 ATAD2Q6PL18 1390 aa12.11□□□□□ -0.47
NFIX-211ENST00000588680 RBM6P78332 1123 aaKnown RBP12.11□□□□□ -0.47
NFIX-211ENST00000588680 ADGRL3Q9HAR2 1447 aa12.11□□□□□ -0.47
NFIX-211ENST00000588680 MARF1Q9Y4F3 1742 aaKnown RBP12.09□□□□□ -0.47
NFIX-211ENST00000588680 LOC105371045A0A1W2PR82 267 aa12.09□□□□□ -0.47
NFIX-211ENST00000588680 DDX17Q92841 729 aaKnown RBP12.09□□□□□ -0.47
NFIX-211ENST00000588680 QTRT2Q9H974 415 aaKnown RBP12.09□□□□□ -0.47
NFIX-211ENST00000588680 APLP2Q06481 763 aa12.08□□□□□ -0.48
NFIX-211ENST00000588680 LRRC59Q96AG4 307 aaKnown RBP12.08□□□□□ -0.48
NFIX-211ENST00000588680 COL22A1Q8NFW1 1626 aaPredicted RBP12.08□□□□□ -0.48
NFIX-211ENST00000588680 FAM50AQ14320 339 aaKnown RBP12.07□□□□□ -0.48
NFIX-211ENST00000588680 METP08581 1390 aa12.06□□□□□ -0.48
NFIX-211ENST00000588680 ADAMTS2O95450 1211 aa12.06□□□□□ -0.48
NFIX-211ENST00000588680 NGLY1Q96IV0 654 aa12.05□□□□□ -0.48
NFIX-211ENST00000588680 C1orf167Q5SNV9 1468 aa12.05□□□□□ -0.48
NFIX-211ENST00000588680 NEXMIFQ5QGS0 1516 aa12.05□□□□□ -0.48
NFIX-211ENST00000588680 ATRNO75882 1429 aa12.04□□□□□ -0.48
NFIX-211ENST00000588680 CLTCL1P53675 1640 aa12.04□□□□□ -0.48
NFIX-211ENST00000588680 KIF1BO60333 1816 aa12.03□□□□□ -0.48
NFIX-211ENST00000588680 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.03□□□□□ -0.48
NFIX-211ENST00000588680 PTCH1Q13635 1447 aa12.03□□□□□ -0.48
NFIX-211ENST00000588680 ZRANB1Q9UGI0 708 aa12.02□□□□□ -0.49
NFIX-211ENST00000588680 USP21Q9UK80 565 aa12.02□□□□□ -0.49
NFIX-211ENST00000588680 BRWD3Q6RI45 1802 aa12.02□□□□□ -0.49
NFIX-211ENST00000588680 TRPC5Q9UL62 973 aaPredicted RBP12.01□□□□□ -0.49
NFIX-211ENST00000588680 MYOM2P54296 1465 aa12.01□□□□□ -0.49
NFIX-211ENST00000588680 NUP155O75694 1391 aa12□□□□□ -0.49
NFIX-211ENST00000588680 ROCK1Q13464 1354 aa12□□□□□ -0.49
NFIX-211ENST00000588680 LRP5O75197 1615 aa12□□□□□ -0.49
NFIX-211ENST00000588680 FOXD1Q16676 465 aa11.99□□□□□ -0.49
NFIX-211ENST00000588680 ZNF326Q5BKZ1 582 aaKnown RBP11.99□□□□□ -0.49
NFIX-211ENST00000588680 SOS2Q07890 1332 aaPredicted RBP11.99□□□□□ -0.49
NFIX-211ENST00000588680 FNBP4Q8N3X1 1017 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms