RNA–Protein interactions for RNA: ENST00000588629.1

ATP6V0A1-218, Transcript of ATPase H+ transporting V0 subunit a1, humanhuman

TSL 2

Gene ATP6V0A1, Length 1,797 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1-218ENST00000588629 TRPM1Q7Z4N2 1603 aa27.66■■■□□ 2.02
ATP6V0A1-218ENST00000588629 ADGRF5Q8IZF2 1346 aa27.66■■■□□ 2.02
ATP6V0A1-218ENST00000588629 MYO3AQ8NEV4 1616 aa27.65■■■□□ 2.02
ATP6V0A1-218ENST00000588629 NRXN1Q9ULB1 1477 aa27.65■■■□□ 2.02
ATP6V0A1-218ENST00000588629 UBR1Q8IWV7 1749 aa27.65■■■□□ 2.02
ATP6V0A1-218ENST00000588629 NUTM2DQ5VT03 806 aaPredicted RBP27.61■■■□□ 2.01
ATP6V0A1-218ENST00000588629 PIK3C2GO75747 1445 aa27.58■■■□□ 2.01
ATP6V0A1-218ENST00000588629 ZFYVE9O95405 1425 aa27.58■■■□□ 2.01
ATP6V0A1-218ENST00000588629 VGFO15240 615 aaPredicted RBP27.58■■■□□ 2
ATP6V0A1-218ENST00000588629 ROCK2O75116 1388 aaKnown RBP27.58■■■□□ 2
ATP6V0A1-218ENST00000588629 NBPF1Q3BBV0 1214 aa27.57■■■□□ 2
ATP6V0A1-218ENST00000588629 RIMS2Q9UQ26 1411 aa27.57■■■□□ 2
ATP6V0A1-218ENST00000588629 KDM4FA0A1W2PPD8 638 aa27.56■■■□□ 2
ATP6V0A1-218ENST00000588629 CEP170BQ9Y4F5 1589 aaPredicted RBP27.56■■■□□ 2
ATP6V0A1-218ENST00000588629 GPRASP1Q5JY77 1395 aa27.54■■■□□ 2
ATP6V0A1-218ENST00000588629 ZNF316A6NFI3 1004 aaPredicted RBP27.54■■■□□ 2
ATP6V0A1-218ENST00000588629 TMEM2Q9UHN6 1383 aa27.54■■■□□ 2
ATP6V0A1-218ENST00000588629 KIAA1210Q9ULL0 1709 aa27.53■■■□□ 2
ATP6V0A1-218ENST00000588629 CARD11Q9BXL7 1154 aa27.53■■■□□ 2
ATP6V0A1-218ENST00000588629 CFAP70Q5T0N1 1121 aa27.51■■□□□ 1.99
ATP6V0A1-218ENST00000588629 ZNF142P52746 1687 aaPredicted RBP27.51■■□□□ 1.99
ATP6V0A1-218ENST00000588629 HIRIP3Q9BW71 556 aaPredicted RBP27.5■■□□□ 1.99
ATP6V0A1-218ENST00000588629 SETD1BQ9UPS6 1966 aaKnown RBP27.5■■□□□ 1.99
ATP6V0A1-218ENST00000588629 EIF4G2P78344 907 aaKnown RBP eCLIP27.5■■□□□ 1.99
ATP6V0A1-218ENST00000588629 LAMC1P11047 1609 aa27.49■■□□□ 1.99
ATP6V0A1-218ENST00000588629 HSPA5P11021 654 aaKnown RBP27.48■■□□□ 1.99
ATP6V0A1-218ENST00000588629 SLIT1O75093 1534 aa27.48■■□□□ 1.99
ATP6V0A1-218ENST00000588629 USP47Q96K76 1375 aa27.48■■□□□ 1.99
ATP6V0A1-218ENST00000588629 ARHGAP23Q9P227 1491 aa27.47■■□□□ 1.99
ATP6V0A1-218ENST00000588629 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.47■■□□□ 1.99
ATP6V0A1-218ENST00000588629 C14orf93Q9H972 538 aaKnown RBP27.47■■□□□ 1.99
ATP6V0A1-218ENST00000588629 THEMISQ8N1K5 641 aaPredicted RBP27.46■■□□□ 1.99
ATP6V0A1-218ENST00000588629 SENP3Q9H4L4 574 aaPredicted RBP27.44■■□□□ 1.98
ATP6V0A1-218ENST00000588629 HDGFP51858 240 aaKnown RBP27.43■■□□□ 1.98
ATP6V0A1-218ENST00000588629 SETBP1Q9Y6X0 1596 aa27.43■■□□□ 1.98
ATP6V0A1-218ENST00000588629 LTKP29376 864 aa27.42■■□□□ 1.98
ATP6V0A1-218ENST00000588629 ADGRB1O14514 1584 aa27.42■■□□□ 1.98
ATP6V0A1-218ENST00000588629 NRXN3Q9Y4C0 1643 aa27.4■■□□□ 1.98
ATP6V0A1-218ENST00000588629 ALKQ9UM73 1620 aa27.39■■□□□ 1.98
ATP6V0A1-218ENST00000588629 TXNDC2Q86VQ3 553 aa27.39■■□□□ 1.98
ATP6V0A1-218ENST00000588629 IQGAP1P46940 1657 aa27.39■■□□□ 1.97
ATP6V0A1-218ENST00000588629 SCAF11Q99590 1463 aaKnown RBP27.37■■□□□ 1.97
ATP6V0A1-218ENST00000588629 EID1Q9Y6B2 187 aa27.37■■□□□ 1.97
ATP6V0A1-218ENST00000588629 ASXL1Q8IXJ9 1541 aa27.37■■□□□ 1.97
ATP6V0A1-218ENST00000588629 TMEM132EQ6IEE7 984 aa27.36■■□□□ 1.97
ATP6V0A1-218ENST00000588629 PLEKHG1Q9ULL1 1385 aa27.35■■□□□ 1.97
ATP6V0A1-218ENST00000588629 SETD1AO15047 1707 aaKnown RBP27.34■■□□□ 1.97
ATP6V0A1-218ENST00000588629 ST20-MTHFSA0A0A6YYL1 179 aa27.34■■□□□ 1.97
ATP6V0A1-218ENST00000588629 ADAMTS13Q76LX8 1427 aa27.3■■□□□ 1.96
ATP6V0A1-218ENST00000588629 BCANQ96GW7 911 aa27.27■■□□□ 1.96
ATP6V0A1-218ENST00000588629 ANKLE2Q86XL3 938 aa27.26■■□□□ 1.95
ATP6V0A1-218ENST00000588629 EIF3AQ14152 1382 aaKnown RBP27.26■■□□□ 1.95
ATP6V0A1-218ENST00000588629 C11orf95C9JLR9 678 aaPredicted RBP27.25■■□□□ 1.95
ATP6V0A1-218ENST00000588629 TRAK1Q9UPV9 953 aa27.25■■□□□ 1.95
ATP6V0A1-218ENST00000588629 MED14O60244 1454 aa27.25■■□□□ 1.95
ATP6V0A1-218ENST00000588629 METP08581 1390 aa27.25■■□□□ 1.95
ATP6V0A1-218ENST00000588629 YTHDC2Q9H6S0 1430 aaKnown RBP27.24■■□□□ 1.95
ATP6V0A1-218ENST00000588629 TESK2Q96S53 571 aa27.23■■□□□ 1.95
ATP6V0A1-218ENST00000588629 WASHC2AQ641Q2 1341 aa27.21■■□□□ 1.95
ATP6V0A1-218ENST00000588629 ARHGEF28Q8N1W1 1705 aaKnown RBP27.21■■□□□ 1.95
ATP6V0A1-218ENST00000588629 SLC26A8Q96RN1 970 aa27.21■■□□□ 1.95
ATP6V0A1-218ENST00000588629 LMTK3Q96Q04 1460 aa27.21■■□□□ 1.95
ATP6V0A1-218ENST00000588629 STK26Q9P289 416 aa27.2■■□□□ 1.95
ATP6V0A1-218ENST00000588629 POLR1AO95602 1720 aaPredicted RBP27.19■■□□□ 1.94
ATP6V0A1-218ENST00000588629 DIP2AQ14689 1571 aa27.18■■□□□ 1.94
ATP6V0A1-218ENST00000588629 LRPPRCP42704 1394 aaKnown RBP27.18■■□□□ 1.94
ATP6V0A1-218ENST00000588629 KIF7Q2M1P5 1343 aa27.17■■□□□ 1.94
ATP6V0A1-218ENST00000588629 CCDC7Q96M83 1385 aa27.17■■□□□ 1.94
ATP6V0A1-218ENST00000588629 TBX22Q9Y458 520 aa27.17■■□□□ 1.94
ATP6V0A1-218ENST00000588629 CENPJQ9HC77 1338 aaPredicted RBP27.16■■□□□ 1.94
ATP6V0A1-218ENST00000588629 HSPA2P54652 639 aa27.15■■□□□ 1.94
ATP6V0A1-218ENST00000588629 NCKAP5LQ9HCH0 1330 aa27.15■■□□□ 1.94
ATP6V0A1-218ENST00000588629 ABCC11Q96J66 1382 aa27.14■■□□□ 1.94
ATP6V0A1-218ENST00000588629 NPHP4O75161 1426 aaPredicted RBP27.14■■□□□ 1.94
ATP6V0A1-218ENST00000588629 DISP3Q9P2K9 1392 aa27.13■■□□□ 1.93
ATP6V0A1-218ENST00000588629 DLC1Q96QB1 1528 aa27.13■■□□□ 1.93
ATP6V0A1-218ENST00000588629 QRICH2Q9H0J4 1663 aa27.13■■□□□ 1.93
ATP6V0A1-218ENST00000588629 SBNO2Q9Y2G9 1366 aa27.12■■□□□ 1.93
ATP6V0A1-218ENST00000588629 PTPRUQ92729 1446 aa27.12■■□□□ 1.93
ATP6V0A1-218ENST00000588629 KNDC1Q76NI1 1749 aa27.11■■□□□ 1.93
ATP6V0A1-218ENST00000588629 TECPR2O15040 1411 aa27.11■■□□□ 1.93
ATP6V0A1-218ENST00000588629 DIEXFQ68CQ4 756 aaKnown RBP27.1■■□□□ 1.93
ATP6V0A1-218ENST00000588629 TMF1P82094 1093 aa27.09■■□□□ 1.93
ATP6V0A1-218ENST00000588629 PRAM1Q96QH2 718 aa27.09■■□□□ 1.93
ATP6V0A1-218ENST00000588629 DDX10Q13206 875 aaKnown RBP27.09■■□□□ 1.93
ATP6V0A1-218ENST00000588629 CPS1P31327 1500 aa27.08■■□□□ 1.93
ATP6V0A1-218ENST00000588629 SAFB2Q14151 953 aaKnown RBP eCLIP27.06■■□□□ 1.92
ATP6V0A1-218ENST00000588629 PIK3R4Q99570 1358 aa27.05■■□□□ 1.92
ATP6V0A1-218ENST00000588629 PLEKHH1Q9ULM0 1364 aa27.05■■□□□ 1.92
ATP6V0A1-218ENST00000588629 POLR3GLQ9BT43 218 aa27.04■■□□□ 1.92
ATP6V0A1-218ENST00000588629 POGKQ9P215 609 aa27.04■■□□□ 1.92
ATP6V0A1-218ENST00000588629 WAPLQ7Z5K2 1190 aa27.04■■□□□ 1.92
ATP6V0A1-218ENST00000588629 ROBO2Q9HCK4 1378 aa27.04■■□□□ 1.92
ATP6V0A1-218ENST00000588629 FAM135BQ49AJ0 1406 aa27.03■■□□□ 1.92
ATP6V0A1-218ENST00000588629 AMOTL2Q9Y2J4 779 aa27.03■■□□□ 1.92
ATP6V0A1-218ENST00000588629 XRN1Q8IZH2 1706 aaKnown RBP27.03■■□□□ 1.92
ATP6V0A1-218ENST00000588629 SLC24A1O60721 1099 aa27.02■■□□□ 1.92
ATP6V0A1-218ENST00000588629 SIRT1Q96EB6 747 aa27.02■■□□□ 1.92
ATP6V0A1-218ENST00000588629 STRCQ7RTU9 1775 aa27■■□□□ 1.91
ATP6V0A1-218ENST00000588629 TULP4Q9NRJ4 1543 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms