RNA–Protein interactions for RNA: ENST00000588606.5

SMIM22-204, Transcript of small integral membrane protein 22, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SMIM22, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM22-204ENST00000588606 ADGRB3O60242 1522 aa17.13■□□□□ 0.33
SMIM22-204ENST00000588606 RPRD2Q5VT52 1461 aaKnown RBP17.12■□□□□ 0.33
SMIM22-204ENST00000588606 ITGAEP38570 1179 aa17.12■□□□□ 0.33
SMIM22-204ENST00000588606 RBM33Q96EV2 1170 aaKnown RBP17.12■□□□□ 0.33
SMIM22-204ENST00000588606 TET3O43151 1660 aa17.12■□□□□ 0.33
SMIM22-204ENST00000588606 NKTRP30414 1462 aaKnown RBP17.12■□□□□ 0.33
SMIM22-204ENST00000588606 SLC52A1Q9NWF4 448 aa17.11■□□□□ 0.33
SMIM22-204ENST00000588606 TMEM2Q9UHN6 1383 aa17.11■□□□□ 0.33
SMIM22-204ENST00000588606 SHPRHQ149N8 1683 aa17.1■□□□□ 0.33
SMIM22-204ENST00000588606 NOS1P29475 1434 aa17.09■□□□□ 0.33
SMIM22-204ENST00000588606 IDI1Q13907 227 aa17.07■□□□□ 0.32
SMIM22-204ENST00000588606 LRP6O75581 1613 aa17.07■□□□□ 0.32
SMIM22-204ENST00000588606 MSH6P52701 1360 aa17.06■□□□□ 0.32
SMIM22-204ENST00000588606 PROSER2Q86WR7 435 aaPredicted RBP17.06■□□□□ 0.32
SMIM22-204ENST00000588606 SLC26A8Q96RN1 970 aa17.06■□□□□ 0.32
SMIM22-204ENST00000588606 UNC13BO14795 1591 aa17.06■□□□□ 0.32
SMIM22-204ENST00000588606 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.05■□□□□ 0.32
SMIM22-204ENST00000588606 HDGFP51858 240 aaKnown RBP17.04■□□□□ 0.32
SMIM22-204ENST00000588606 RRBP1Q9P2E9 1410 aaKnown RBP17.04■□□□□ 0.32
SMIM22-204ENST00000588606 NUP155O75694 1391 aa17.03■□□□□ 0.32
SMIM22-204ENST00000588606 JCADQ9P266 1359 aa17.03■□□□□ 0.32
SMIM22-204ENST00000588606 KCNA6P17658 529 aa17.03■□□□□ 0.32
SMIM22-204ENST00000588606 BCANQ96GW7 911 aa17.01■□□□□ 0.31
SMIM22-204ENST00000588606 AHDC1Q5TGY3 1603 aaPredicted RBP17■□□□□ 0.31
SMIM22-204ENST00000588606 TRIM52Q96A61 297 aa17■□□□□ 0.31
SMIM22-204ENST00000588606 PPP1R15AO75807 674 aaPredicted RBP16.99■□□□□ 0.31
SMIM22-204ENST00000588606 MEX3CQ5U5Q3 659 aaKnown RBP16.99■□□□□ 0.31
SMIM22-204ENST00000588606 TMEM131LA2VDJ0 1609 aa16.98■□□□□ 0.31
SMIM22-204ENST00000588606 IQGAP3Q86VI3 1631 aa16.98■□□□□ 0.31
SMIM22-204ENST00000588606 CHGAP10645 457 aaKnown RBP16.97■□□□□ 0.31
SMIM22-204ENST00000588606 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.97■□□□□ 0.31
SMIM22-204ENST00000588606 SLAIN2Q9P270 581 aa16.96■□□□□ 0.31
SMIM22-204ENST00000588606 DIP2AQ14689 1571 aa16.95■□□□□ 0.3
SMIM22-204ENST00000588606 NHSL1Q5SYE7 1610 aa16.95■□□□□ 0.3
SMIM22-204ENST00000588606 UPF1Q92900 1129 aaKnown RBP eCLIP16.94■□□□□ 0.3
SMIM22-204ENST00000588606 C14orf37Q86TY3 774 aa16.93■□□□□ 0.3
SMIM22-204ENST00000588606 ZFYVE9O95405 1425 aa16.93■□□□□ 0.3
SMIM22-204ENST00000588606 RIMS2Q9UQ26 1411 aa16.93■□□□□ 0.3
SMIM22-204ENST00000588606 PLEKHG1Q9ULL1 1385 aa16.92■□□□□ 0.3
SMIM22-204ENST00000588606 E9PCH4 1651 aa16.92■□□□□ 0.3
SMIM22-204ENST00000588606 SPATA31A6Q5VVP1 1343 aa16.92■□□□□ 0.3
SMIM22-204ENST00000588606 NAIPQ13075 1403 aa16.91■□□□□ 0.3
SMIM22-204ENST00000588606 ZNF772Q68DY9 489 aaPredicted RBP16.9■□□□□ 0.3
SMIM22-204ENST00000588606 HFM1A2PYH4 1435 aa16.89■□□□□ 0.29
SMIM22-204ENST00000588606 TRPM2O94759 1503 aa16.88■□□□□ 0.29
SMIM22-204ENST00000588606 NALCNQ8IZF0 1738 aa16.87■□□□□ 0.29
SMIM22-204ENST00000588606 XRN1Q8IZH2 1706 aaKnown RBP16.87■□□□□ 0.29
SMIM22-204ENST00000588606 CDK12Q9NYV4 1490 aaPredicted RBP16.86■□□□□ 0.29
SMIM22-204ENST00000588606 ASXL1Q8IXJ9 1541 aa16.86■□□□□ 0.29
SMIM22-204ENST00000588606 NUTM2BA6NNL0 878 aaPredicted RBP16.86■□□□□ 0.29
SMIM22-204ENST00000588606 NUTM2EB1AL46 878 aaPredicted RBP16.86■□□□□ 0.29
SMIM22-204ENST00000588606 NUTM2AQ8IVF1 878 aaPredicted RBP16.86■□□□□ 0.29
SMIM22-204ENST00000588606 TBX22Q9Y458 520 aa16.85■□□□□ 0.29
SMIM22-204ENST00000588606 RXRBP28702 533 aa16.84■□□□□ 0.29
SMIM22-204ENST00000588606 ZNF326Q5BKZ1 582 aaKnown RBP16.84■□□□□ 0.29
SMIM22-204ENST00000588606 RGS12O14924 1447 aa16.84■□□□□ 0.29
SMIM22-204ENST00000588606 NRXN3Q9Y4C0 1643 aa16.84■□□□□ 0.29
SMIM22-204ENST00000588606 ADAMTS13Q76LX8 1427 aa16.83■□□□□ 0.28
SMIM22-204ENST00000588606 NCOA3Q9Y6Q9 1424 aa16.82■□□□□ 0.28
SMIM22-204ENST00000588606 PIK3R4Q99570 1358 aa16.82■□□□□ 0.28
SMIM22-204ENST00000588606 ACIN1Q9UKV3 1341 aaKnown RBP16.82■□□□□ 0.28
SMIM22-204ENST00000588606 ATF3P18847 181 aa16.82■□□□□ 0.28
SMIM22-204ENST00000588606 NUTM2DQ5VT03 806 aaPredicted RBP16.82■□□□□ 0.28
SMIM22-204ENST00000588606 SLC4A1APQ9BWU0 796 aaKnown RBP16.82■□□□□ 0.28
SMIM22-204ENST00000588606 AFF2P51816 1311 aa16.81■□□□□ 0.28
SMIM22-204ENST00000588606 SPHKAPQ2M3C7 1700 aa16.81■□□□□ 0.28
SMIM22-204ENST00000588606 CADPS2Q86UW7 1296 aa16.8■□□□□ 0.28
SMIM22-204ENST00000588606 MARF1Q9Y4F3 1742 aaKnown RBP16.78■□□□□ 0.28
SMIM22-204ENST00000588606 BRINP3Q76B58 766 aa16.77■□□□□ 0.28
SMIM22-204ENST00000588606 C19orf44Q9H6X5 657 aa16.77■□□□□ 0.28
SMIM22-204ENST00000588606 DCCP43146 1447 aa16.76■□□□□ 0.27
SMIM22-204ENST00000588606 PTPRUQ92729 1446 aa16.76■□□□□ 0.27
SMIM22-204ENST00000588606 C8orf37Q96NL8 207 aa16.75■□□□□ 0.27
SMIM22-204ENST00000588606 MST1RQ04912 1400 aa16.75■□□□□ 0.27
SMIM22-204ENST00000588606 SRCAPQ6ZRS2 3230 aa16.74■□□□□ 0.27
SMIM22-204ENST00000588606 SETBP1Q9Y6X0 1596 aa16.74■□□□□ 0.27
SMIM22-204ENST00000588606 SETD5Q9C0A6 1442 aa16.74■□□□□ 0.27
SMIM22-204ENST00000588606 VGFO15240 615 aaPredicted RBP16.73■□□□□ 0.27
SMIM22-204ENST00000588606 CLTCL1P53675 1640 aa16.73■□□□□ 0.27
SMIM22-204ENST00000588606 RPGRIP1LQ68CZ1 1315 aa16.72■□□□□ 0.27
SMIM22-204ENST00000588606 AMOTL2Q9Y2J4 779 aa16.72■□□□□ 0.27
SMIM22-204ENST00000588606 KIF1BO60333 1816 aa16.72■□□□□ 0.27
SMIM22-204ENST00000588606 LAMC1P11047 1609 aa16.71■□□□□ 0.27
SMIM22-204ENST00000588606 EP400Q96L91 3159 aa16.7■□□□□ 0.26
SMIM22-204ENST00000588606 PNPLA6Q8IY17 1366 aa16.7■□□□□ 0.26
SMIM22-204ENST00000588606 CCDC144AA2RUR9 1427 aa16.7■□□□□ 0.26
SMIM22-204ENST00000588606 DDX17Q92841 729 aaKnown RBP16.69■□□□□ 0.26
SMIM22-204ENST00000588606 NEXMIFQ5QGS0 1516 aa16.69■□□□□ 0.26
SMIM22-204ENST00000588606 ATAD2Q6PL18 1390 aa16.68■□□□□ 0.26
SMIM22-204ENST00000588606 RBM6P78332 1123 aaKnown RBP16.68■□□□□ 0.26
SMIM22-204ENST00000588606 QTRT2Q9H974 415 aaKnown RBP16.68■□□□□ 0.26
SMIM22-204ENST00000588606 COL22A1Q8NFW1 1626 aaPredicted RBP16.67■□□□□ 0.26
SMIM22-204ENST00000588606 MPHOSPH9Q99550 1183 aa16.67■□□□□ 0.26
SMIM22-204ENST00000588606 ADGRL3Q9HAR2 1447 aa16.67■□□□□ 0.26
SMIM22-204ENST00000588606 ADAMTS2O95450 1211 aa16.66■□□□□ 0.26
SMIM22-204ENST00000588606 BRWD3Q6RI45 1802 aa16.66■□□□□ 0.26
SMIM22-204ENST00000588606 LRRC59Q96AG4 307 aaKnown RBP16.65■□□□□ 0.26
SMIM22-204ENST00000588606 METP08581 1390 aa16.64■□□□□ 0.26
SMIM22-204ENST00000588606 FOXD1Q16676 465 aa16.64■□□□□ 0.25
SMIM22-204ENST00000588606 NGLY1Q96IV0 654 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms