RNA–Protein interactions for RNA: ENST00000588582.3

LSM14A-206, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2

Gene LSM14A, Length 3,601 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-206ENST00000588582 C17orf53Q8N3J3 647 aaPredicted RBP12.94□□□□□ -0.34
LSM14A-206ENST00000588582 NAIPQ13075 1403 aa12.94□□□□□ -0.34
LSM14A-206ENST00000588582 SMC4Q9NTJ3 1288 aa12.94□□□□□ -0.34
LSM14A-206ENST00000588582 STAC3Q96MF2 364 aa12.93□□□□□ -0.34
LSM14A-206ENST00000588582 PEG3Q9GZU2 1588 aa12.93□□□□□ -0.34
LSM14A-206ENST00000588582 DHX29Q7Z478 1369 aaKnown RBP12.93□□□□□ -0.34
LSM14A-206ENST00000588582 GTF2E1P29083 439 aaPredicted RBP12.93□□□□□ -0.34
LSM14A-206ENST00000588582 ANKRD45Q5TZF3 282 aa12.93□□□□□ -0.34
LSM14A-206ENST00000588582 TAF7LQ5H9L4 462 aa12.93□□□□□ -0.34
LSM14A-206ENST00000588582 HFM1A2PYH4 1435 aa12.92□□□□□ -0.34
LSM14A-206ENST00000588582 NCOA2Q15596 1464 aa12.92□□□□□ -0.34
LSM14A-206ENST00000588582 DMTNQ08495 405 aa12.92□□□□□ -0.34
LSM14A-206ENST00000588582 SPC24Q8NBT2 197 aa12.92□□□□□ -0.34
LSM14A-206ENST00000588582 PRIM1P49642 420 aaKnown RBP12.92□□□□□ -0.34
LSM14A-206ENST00000588582 RBM42Q9BTD8 480 aaKnown RBP12.92□□□□□ -0.34
LSM14A-206ENST00000588582 TNNQ9UQP3 1299 aa12.92□□□□□ -0.34
LSM14A-206ENST00000588582 NCAPD3P42695 1498 aa12.92□□□□□ -0.34
LSM14A-206ENST00000588582 TIAM1Q13009 1591 aa12.91□□□□□ -0.34
LSM14A-206ENST00000588582 ZKSCAN5Q9Y2L8 839 aa12.91□□□□□ -0.34
LSM14A-206ENST00000588582 USP19O94966 1318 aa12.91□□□□□ -0.34
LSM14A-206ENST00000588582 HMGN5P82970 282 aaKnown RBP12.91□□□□□ -0.34
LSM14A-206ENST00000588582 U2AF2P26368 475 aaKnown RBP eCLIP12.9□□□□□ -0.342e-6■■■□□ 15.8
LSM14A-206ENST00000588582 PCDHB15Q9Y5E8 787 aa12.9□□□□□ -0.34
LSM14A-206ENST00000588582 PTPRKQ15262 1439 aa12.9□□□□□ -0.34
LSM14A-206ENST00000588582 RBSNQ9H1K0 784 aa12.9□□□□□ -0.34
LSM14A-206ENST00000588582 CHMP3Q9Y3E7 222 aa12.9□□□□□ -0.34
LSM14A-206ENST00000588582 LETM1O95202 739 aaPredicted RBP12.89□□□□□ -0.35
LSM14A-206ENST00000588582 APPP05067 770 aa12.89□□□□□ -0.35
LSM14A-206ENST00000588582 TTC12Q9H892 705 aaPredicted RBP12.89□□□□□ -0.35
LSM14A-206ENST00000588582 ZNF644Q9H582 1327 aaPredicted RBP12.89□□□□□ -0.35
LSM14A-206ENST00000588582 ZSCAN23Q3MJ62 389 aa12.89□□□□□ -0.35
LSM14A-206ENST00000588582 PRXQ9BXM0 1461 aa12.88□□□□□ -0.35
LSM14A-206ENST00000588582 BAG4O95429 457 aaKnown RBP12.88□□□□□ -0.35
LSM14A-206ENST00000588582 ZBTB9Q96C00 473 aa12.88□□□□□ -0.35
LSM14A-206ENST00000588582 CFDP1Q9UEE9 299 aaPredicted RBP12.88□□□□□ -0.35
LSM14A-206ENST00000588582 SLFN5Q08AF3 891 aa12.88□□□□□ -0.35
LSM14A-206ENST00000588582 K7ELQ4 463 aaPredicted RBP12.88□□□□□ -0.35
LSM14A-206ENST00000588582 GTPBP4Q9BZE4 634 aaKnown RBP12.88□□□□□ -0.35
LSM14A-206ENST00000588582 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.87□□□□□ -0.35
LSM14A-206ENST00000588582 CCDC66A2RUB6 948 aa12.87□□□□□ -0.35
LSM14A-206ENST00000588582 NBPF1Q3BBV0 1214 aa12.87□□□□□ -0.35
LSM14A-206ENST00000588582 ZFP91Q96JP5 570 aaPredicted RBP12.87□□□□□ -0.35
LSM14A-206ENST00000588582 SYAP1Q96A49 352 aaPredicted RBP12.87□□□□□ -0.35
LSM14A-206ENST00000588582 SPINK5Q9NQ38 1064 aaPredicted RBP12.87□□□□□ -0.35
LSM14A-206ENST00000588582 USP25Q9UHP3 1055 aa12.87□□□□□ -0.35
LSM14A-206ENST00000588582 NOL7Q9UMY1 257 aaKnown RBP12.87□□□□□ -0.35
LSM14A-206ENST00000588582 KIF20AO95235 890 aa12.86□□□□□ -0.35
LSM14A-206ENST00000588582 IFT57Q9NWB7 429 aa12.86□□□□□ -0.35
LSM14A-206ENST00000588582 DIAPH3Q9NSV4 1193 aa12.86□□□□□ -0.35
LSM14A-206ENST00000588582 PDE3AQ14432 1141 aa12.86□□□□□ -0.35
LSM14A-206ENST00000588582 CHAMP1Q96JM3 812 aa12.86□□□□□ -0.35
LSM14A-206ENST00000588582 EIF4G1Q04637 1599 aaKnown RBP12.85□□□□□ -0.35
LSM14A-206ENST00000588582 TSPY4P0CV99 314 aa12.85□□□□□ -0.35
LSM14A-206ENST00000588582 TSPY10P0CW01 314 aa12.85□□□□□ -0.35
LSM14A-206ENST00000588582 PPP2R1AP30153 589 aa12.85□□□□□ -0.35
LSM14A-206ENST00000588582 KLHL40Q2TBA0 621 aa12.85□□□□□ -0.35
LSM14A-206ENST00000588582 IPO4Q8TEX9 1081 aaKnown RBP12.85□□□□□ -0.35
LSM14A-206ENST00000588582 NUCB2P80303 420 aa12.85□□□□□ -0.35
LSM14A-206ENST00000588582 DZIP1LQ8IYY4 767 aaKnown RBP12.85□□□□□ -0.35
LSM14A-206ENST00000588582 NUP155O75694 1391 aa12.84□□□□□ -0.35
LSM14A-206ENST00000588582 TRIM6-TRIM34B2RNG4 842 aa12.84□□□□□ -0.35
LSM14A-206ENST00000588582 ZKSCAN2Q63HK3 967 aa12.84□□□□□ -0.35
LSM14A-206ENST00000588582 TRIM34Q9BYJ4 488 aa12.84□□□□□ -0.35
LSM14A-206ENST00000588582 TSPY26PQ9H489 355 aa12.84□□□□□ -0.35
LSM14A-206ENST00000588582 GDPD2Q9HCC8 539 aa12.84□□□□□ -0.35
LSM14A-206ENST00000588582 CIZ1Q9ULV3 898 aaPredicted RBP12.83□□□□□ -0.35
LSM14A-206ENST00000588582 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.83□□□□□ -0.35
LSM14A-206ENST00000588582 U2AF1L5P0DN76 240 aaPredicted RBP12.83□□□□□ -0.36
LSM14A-206ENST00000588582 U2AF1Q01081 240 aaKnown RBP eCLIP12.83□□□□□ -0.36
LSM14A-206ENST00000588582 GAS2L2Q8NHY3 880 aa12.83□□□□□ -0.36
LSM14A-206ENST00000588582 CASC1Q6TDU7 716 aa12.83□□□□□ -0.36
LSM14A-206ENST00000588582 CFTRP13569 1480 aa12.83□□□□□ -0.36
LSM14A-206ENST00000588582 PLEKHH1Q9ULM0 1364 aa12.82□□□□□ -0.36
LSM14A-206ENST00000588582 IRX3P78415 501 aaPredicted RBP12.82□□□□□ -0.36
LSM14A-206ENST00000588582 C1orf115Q9H7X2 142 aa12.82□□□□□ -0.36
LSM14A-206ENST00000588582 ZSCAN20P17040 1043 aaPredicted RBP12.82□□□□□ -0.36
LSM14A-206ENST00000588582 NOLC1Q14978 699 aaKnown RBP eCLIP12.82□□□□□ -0.36
LSM14A-206ENST00000588582 LRPPRCP42704 1394 aaKnown RBP12.82□□□□□ -0.36
LSM14A-206ENST00000588582 ELL2O00472 640 aaPredicted RBP12.82□□□□□ -0.36
LSM14A-206ENST00000588582 ST18O60284 1047 aa12.82□□□□□ -0.36
LSM14A-206ENST00000588582 ATP2B3Q16720 1220 aa12.82□□□□□ -0.36
LSM14A-206ENST00000588582 TAF3Q5VWG9 929 aa12.82□□□□□ -0.36
LSM14A-206ENST00000588582 PPP1R9BQ96SB3 815 aa12.81□□□□□ -0.36
LSM14A-206ENST00000588582 RLBP1P12271 317 aa12.81□□□□□ -0.36
LSM14A-206ENST00000588582 RAB3GAP1Q15042 981 aa12.81□□□□□ -0.36
LSM14A-206ENST00000588582 TMX1Q9H3N1 280 aa12.81□□□□□ -0.36
LSM14A-206ENST00000588582 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.81□□□□□ -0.36
LSM14A-206ENST00000588582 V9GYY5 206 aaPredicted RBP12.81□□□□□ -0.36
LSM14A-206ENST00000588582 CHGAP10645 457 aaKnown RBP12.8□□□□□ -0.36
LSM14A-206ENST00000588582 MYOM3Q5VTT5 1437 aa12.8□□□□□ -0.36
LSM14A-206ENST00000588582 KIF16BQ96L93 1317 aa12.8□□□□□ -0.36
LSM14A-206ENST00000588582 UTP14CQ5TAP6 766 aaKnown RBP12.8□□□□□ -0.36
LSM14A-206ENST00000588582 MORC1Q86VD1 984 aa12.8□□□□□ -0.36
LSM14A-206ENST00000588582 TERF1P54274 439 aa12.79□□□□□ -0.36
LSM14A-206ENST00000588582 EIF3AQ14152 1382 aaKnown RBP12.79□□□□□ -0.36
LSM14A-206ENST00000588582 TSR2Q969E8 191 aaKnown RBP12.79□□□□□ -0.36
LSM14A-206ENST00000588582 C16orf45Q96MC5 204 aaPredicted RBP12.79□□□□□ -0.36
LSM14A-206ENST00000588582 TIGD1Q96MW7 591 aa12.79□□□□□ -0.36
LSM14A-206ENST00000588582 BCL2L12Q9HB09 334 aa12.79□□□□□ -0.36
LSM14A-206ENST00000588582 PHF14O94880 888 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms