RNA–Protein interactions for RNA: ENST00000588472.6

SDF2-207, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 681 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-207ENST00000588472 PPP1R15AO75807 674 aaPredicted RBP13.27□□□□□ -0.29
SDF2-207ENST00000588472 SLC26A8Q96RN1 970 aa13.27□□□□□ -0.29
SDF2-207ENST00000588472 ARHGAP23Q9P227 1491 aa13.27□□□□□ -0.29
SDF2-207ENST00000588472 ADGRB3O60242 1522 aa13.27□□□□□ -0.29
SDF2-207ENST00000588472 HFM1A2PYH4 1435 aa13.25□□□□□ -0.29
SDF2-207ENST00000588472 HDGFP51858 240 aaKnown RBP13.24□□□□□ -0.29
SDF2-207ENST00000588472 SLC4A1APQ9BWU0 796 aaKnown RBP13.24□□□□□ -0.29
SDF2-207ENST00000588472 MYO5BQ9ULV0 1848 aa13.24□□□□□ -0.29
SDF2-207ENST00000588472 RIMS2Q9UQ26 1411 aa13.23□□□□□ -0.29
SDF2-207ENST00000588472 ZNF326Q5BKZ1 582 aaKnown RBP13.23□□□□□ -0.29
SDF2-207ENST00000588472 ALKQ9UM73 1620 aa13.23□□□□□ -0.29
SDF2-207ENST00000588472 KDM5AP29375 1690 aaKnown RBP13.22□□□□□ -0.29
SDF2-207ENST00000588472 TMEM131LA2VDJ0 1609 aa13.22□□□□□ -0.29
SDF2-207ENST00000588472 FOXD1Q16676 465 aa13.22□□□□□ -0.29
SDF2-207ENST00000588472 LRRC7Q96NW7 1537 aa13.22□□□□□ -0.29
SDF2-207ENST00000588472 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.2□□□□□ -0.3
SDF2-207ENST00000588472 RBM33Q96EV2 1170 aaKnown RBP13.2□□□□□ -0.3
SDF2-207ENST00000588472 STRCP1A6NGW2 1772 aa13.2□□□□□ -0.3
SDF2-207ENST00000588472 SPHKAPQ2M3C7 1700 aa13.19□□□□□ -0.3
SDF2-207ENST00000588472 ZFYVE9O95405 1425 aa13.19□□□□□ -0.3
SDF2-207ENST00000588472 PROSER2Q86WR7 435 aaPredicted RBP13.18□□□□□ -0.3
SDF2-207ENST00000588472 RGS17Q9UGC6 210 aaPredicted RBP13.18□□□□□ -0.3
SDF2-207ENST00000588472 POTEDQ86YR6 584 aa13.17□□□□□ -0.3
SDF2-207ENST00000588472 PLEKHG1Q9ULL1 1385 aa13.17□□□□□ -0.3
SDF2-207ENST00000588472 KCNA6P17658 529 aa13.16□□□□□ -0.3
SDF2-207ENST00000588472 MPHOSPH9Q99550 1183 aa13.16□□□□□ -0.3
SDF2-207ENST00000588472 SETD5Q9C0A6 1442 aa13.15□□□□□ -0.3
SDF2-207ENST00000588472 CLTCL1P53675 1640 aa13.15□□□□□ -0.3
SDF2-207ENST00000588472 TRPM2O94759 1503 aa13.13□□□□□ -0.31
SDF2-207ENST00000588472 TBX22Q9Y458 520 aa13.13□□□□□ -0.31
SDF2-207ENST00000588472 TMEM94Q12767 1356 aa13.12□□□□□ -0.31
SDF2-207ENST00000588472 RGL3Q3MIN7 710 aa13.12□□□□□ -0.31
SDF2-207ENST00000588472 C14orf37Q86TY3 774 aa13.12□□□□□ -0.31
SDF2-207ENST00000588472 FAM135BQ49AJ0 1406 aa13.12□□□□□ -0.31
SDF2-207ENST00000588472 RAB3GAP2Q9H2M9 1393 aa13.11□□□□□ -0.31
SDF2-207ENST00000588472 POTEAQ6S8J7 498 aa13.11□□□□□ -0.31
SDF2-207ENST00000588472 KIF1BO60333 1816 aa13.11□□□□□ -0.31
SDF2-207ENST00000588472 ADAMTS13Q76LX8 1427 aa13.1□□□□□ -0.31
SDF2-207ENST00000588472 AMOTL2Q9Y2J4 779 aa13.08□□□□□ -0.32
SDF2-207ENST00000588472 XIRP1Q702N8 1843 aaKnown RBP13.08□□□□□ -0.32
SDF2-207ENST00000588472 CCDC144AA2RUR9 1427 aa13.07□□□□□ -0.32
SDF2-207ENST00000588472 VGFO15240 615 aaPredicted RBP13.07□□□□□ -0.32
SDF2-207ENST00000588472 NEXMIFQ5QGS0 1516 aa13.07□□□□□ -0.32
SDF2-207ENST00000588472 CHD2O14647 1828 aaKnown RBP13.06□□□□□ -0.32
SDF2-207ENST00000588472 ACIN1Q9UKV3 1341 aaKnown RBP13.06□□□□□ -0.32
SDF2-207ENST00000588472 MSH6P52701 1360 aa13.06□□□□□ -0.32
SDF2-207ENST00000588472 NKTRP30414 1462 aaKnown RBP13.05□□□□□ -0.32
SDF2-207ENST00000588472 NWD1Q149M9 1564 aa13.05□□□□□ -0.32
SDF2-207ENST00000588472 METP08581 1390 aa13.05□□□□□ -0.32
SDF2-207ENST00000588472 PTPRUQ92729 1446 aa13.05□□□□□ -0.32
SDF2-207ENST00000588472 DIP2AQ14689 1571 aa13.04□□□□□ -0.32
SDF2-207ENST00000588472 RPGRIP1LQ68CZ1 1315 aa13.04□□□□□ -0.32
SDF2-207ENST00000588472 PIK3R4Q99570 1358 aa13.03□□□□□ -0.32
SDF2-207ENST00000588472 SETBP1Q9Y6X0 1596 aa13.03□□□□□ -0.32
SDF2-207ENST00000588472 NRXN3Q9Y4C0 1643 aa13.02□□□□□ -0.32
SDF2-207ENST00000588472 ATF3P18847 181 aa13.02□□□□□ -0.33
SDF2-207ENST00000588472 SLAIN2Q9P270 581 aa13.02□□□□□ -0.33
SDF2-207ENST00000588472 ADGRF5Q8IZF2 1346 aa13.01□□□□□ -0.33
SDF2-207ENST00000588472 ROBO1Q9Y6N7 1651 aa13□□□□□ -0.33
SDF2-207ENST00000588472 JCADQ9P266 1359 aa13□□□□□ -0.33
SDF2-207ENST00000588472 C19orf44Q9H6X5 657 aa13□□□□□ -0.33
SDF2-207ENST00000588472 STK26Q9P289 416 aa12.99□□□□□ -0.33
SDF2-207ENST00000588472 PPLO60437 1756 aa12.99□□□□□ -0.33
SDF2-207ENST00000588472 SPATA31E1Q6ZUB1 1445 aa12.98□□□□□ -0.33
SDF2-207ENST00000588472 CADPS2Q86UW7 1296 aa12.98□□□□□ -0.33
SDF2-207ENST00000588472 HRCP23327 699 aa12.97□□□□□ -0.33
SDF2-207ENST00000588472 MEX3CQ5U5Q3 659 aaKnown RBP12.97□□□□□ -0.33
SDF2-207ENST00000588472 TMEM132EQ6IEE7 984 aa12.97□□□□□ -0.33
SDF2-207ENST00000588472 KDM2AQ9Y2K7 1162 aa12.97□□□□□ -0.33
SDF2-207ENST00000588472 XRN1Q8IZH2 1706 aaKnown RBP12.96□□□□□ -0.34
SDF2-207ENST00000588472 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.96□□□□□ -0.34
SDF2-207ENST00000588472 NCOA3Q9Y6Q9 1424 aa12.96□□□□□ -0.34
SDF2-207ENST00000588472 ANKRD30BQ9BXX2 1392 aa12.95□□□□□ -0.34
SDF2-207ENST00000588472 ZNF772Q68DY9 489 aaPredicted RBP12.95□□□□□ -0.34
SDF2-207ENST00000588472 SETD1AO15047 1707 aaKnown RBP12.94□□□□□ -0.34
SDF2-207ENST00000588472 ROBO2Q9HCK4 1378 aa12.94□□□□□ -0.34
SDF2-207ENST00000588472 SPATA31A6Q5VVP1 1343 aa12.93□□□□□ -0.34
SDF2-207ENST00000588472 UPF1Q92900 1129 aaKnown RBP eCLIP12.93□□□□□ -0.34
SDF2-207ENST00000588472 PHLPP1O60346 1717 aa12.93□□□□□ -0.34
SDF2-207ENST00000588472 CFAP70Q5T0N1 1121 aa12.92□□□□□ -0.34
SDF2-207ENST00000588472 DCAF11Q8TEB1 546 aa12.92□□□□□ -0.34
SDF2-207ENST00000588472 IFT172Q9UG01 1749 aa12.91□□□□□ -0.34
SDF2-207ENST00000588472 WAPLQ7Z5K2 1190 aa12.91□□□□□ -0.34
SDF2-207ENST00000588472 BRINP3Q76B58 766 aa12.9□□□□□ -0.34
SDF2-207ENST00000588472 PIK3C2GO75747 1445 aa12.89□□□□□ -0.35
SDF2-207ENST00000588472 ADGRL3Q9HAR2 1447 aa12.89□□□□□ -0.35
SDF2-207ENST00000588472 RXRBP28702 533 aa12.89□□□□□ -0.35
SDF2-207ENST00000588472 C14orf93Q9H972 538 aaKnown RBP12.89□□□□□ -0.35
SDF2-207ENST00000588472 PTCH1Q13635 1447 aa12.88□□□□□ -0.35
SDF2-207ENST00000588472 LRP6O75581 1613 aa12.88□□□□□ -0.35
SDF2-207ENST00000588472 NALCNQ8IZF0 1738 aa12.88□□□□□ -0.35
SDF2-207ENST00000588472 NUTM2FA1L443 756 aa12.88□□□□□ -0.35
SDF2-207ENST00000588472 SAFB2Q14151 953 aaKnown RBP eCLIP12.88□□□□□ -0.35
SDF2-207ENST00000588472 DDX17Q92841 729 aaKnown RBP12.88□□□□□ -0.35
SDF2-207ENST00000588472 COL16A1Q07092 1604 aaPredicted RBP12.88□□□□□ -0.35
SDF2-207ENST00000588472 LRPPRCP42704 1394 aaKnown RBP12.87□□□□□ -0.35
SDF2-207ENST00000588472 DCCP43146 1447 aa12.87□□□□□ -0.35
SDF2-207ENST00000588472 MST1RQ04912 1400 aa12.87□□□□□ -0.35
SDF2-207ENST00000588472 DHX57Q6P158 1386 aaKnown RBP12.86□□□□□ -0.35
SDF2-207ENST00000588472 PLEKHH1Q9ULM0 1364 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms