RNA–Protein interactions for RNA: ENST00000588408.5

CNTD1-204, Transcript of cyclin N-terminal domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTD1, Length 2,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTD1-204ENST00000588408 IFT172Q9UG01 1749 aa18.67■□□□□ 0.58
CNTD1-204ENST00000588408 RBM19Q9Y4C8 960 aaKnown RBP18.67■□□□□ 0.58
CNTD1-204ENST00000588408 HECW2Q9P2P5 1572 aa18.66■□□□□ 0.58
CNTD1-204ENST00000588408 CFAP74Q9C0B2 1584 aa18.66■□□□□ 0.58
CNTD1-204ENST00000588408 CHGAP10645 457 aaKnown RBP18.66■□□□□ 0.58
CNTD1-204ENST00000588408 MYOM1P52179 1685 aa18.65■□□□□ 0.58
CNTD1-204ENST00000588408 KIAA1210Q9ULL0 1709 aa18.65■□□□□ 0.58
CNTD1-204ENST00000588408 MLH3Q9UHC1 1453 aa18.65■□□□□ 0.58
CNTD1-204ENST00000588408 LMTK2Q8IWU2 1503 aa18.64■□□□□ 0.58
CNTD1-204ENST00000588408 ERICH6BQ5W0A0 696 aa18.64■□□□□ 0.58
CNTD1-204ENST00000588408 NPATQ14207 1427 aa18.64■□□□□ 0.57
CNTD1-204ENST00000588408 WASHC2CQ9Y4E1 1318 aa18.63■□□□□ 0.57
CNTD1-204ENST00000588408 NEURL4Q96JN8 1562 aa18.63■□□□□ 0.57
CNTD1-204ENST00000588408 STAC3Q96MF2 364 aa18.63■□□□□ 0.57
CNTD1-204ENST00000588408 MYOM2P54296 1465 aa18.63■□□□□ 0.57
CNTD1-204ENST00000588408 NOS1P29475 1434 aa18.62■□□□□ 0.57
CNTD1-204ENST00000588408 RNF123Q5XPI4 1314 aa18.62■□□□□ 0.57
CNTD1-204ENST00000588408 AMER1Q5JTC6 1135 aaPredicted RBP18.6■□□□□ 0.57
CNTD1-204ENST00000588408 SYNMO15061 1565 aa18.6■□□□□ 0.57
CNTD1-204ENST00000588408 ADGRB3O60242 1522 aa18.6■□□□□ 0.57
CNTD1-204ENST00000588408 KNSTRNQ9Y448 316 aa18.6■□□□□ 0.57
CNTD1-204ENST00000588408 SIGLEC1Q9BZZ2 1709 aa18.59■□□□□ 0.57
CNTD1-204ENST00000588408 CDCA7LQ96GN5 454 aa18.59■□□□□ 0.57
CNTD1-204ENST00000588408 ABCC3O15438 1527 aa18.58■□□□□ 0.56
CNTD1-204ENST00000588408 KDM5AP29375 1690 aaKnown RBP18.58■□□□□ 0.56
CNTD1-204ENST00000588408 ERVK-7P63135 1459 aa18.58■□□□□ 0.56
CNTD1-204ENST00000588408 EIF3AQ14152 1382 aaKnown RBP18.57■□□□□ 0.56
CNTD1-204ENST00000588408 NRXN1Q9ULB1 1477 aa18.57■□□□□ 0.56
CNTD1-204ENST00000588408 PPP2R1AP30153 589 aa18.57■□□□□ 0.56
CNTD1-204ENST00000588408 NUTM2DQ5VT03 806 aaPredicted RBP18.56■□□□□ 0.56
CNTD1-204ENST00000588408 PPLO60437 1756 aa18.56■□□□□ 0.56
CNTD1-204ENST00000588408 CYB5RLQ6IPT4 315 aa18.56■□□□□ 0.56
CNTD1-204ENST00000588408 DIP2CQ9Y2E4 1556 aa18.56■□□□□ 0.56
CNTD1-204ENST00000588408 BLMP54132 1417 aaPredicted RBP18.55■□□□□ 0.56
CNTD1-204ENST00000588408 CAMSAP1Q5T5Y3 1602 aa18.55■□□□□ 0.56
CNTD1-204ENST00000588408 CDCA8Q53HL2 280 aa18.55■□□□□ 0.56
CNTD1-204ENST00000588408 ADAMTS8Q9UP79 889 aa18.55■□□□□ 0.56
CNTD1-204ENST00000588408 NEO1Q92859 1461 aa18.54■□□□□ 0.56
CNTD1-204ENST00000588408 RICTORQ6R327 1708 aa18.54■□□□□ 0.56
CNTD1-204ENST00000588408 TMEM132EQ6IEE7 984 aa18.54■□□□□ 0.56
CNTD1-204ENST00000588408 ASXL1Q8IXJ9 1541 aa18.53■□□□□ 0.56
CNTD1-204ENST00000588408 SENP3Q9H4L4 574 aaPredicted RBP18.53■□□□□ 0.56
CNTD1-204ENST00000588408 YEATS2Q9ULM3 1422 aa18.53■□□□□ 0.56
CNTD1-204ENST00000588408 TRAK1Q9UPV9 953 aa18.53■□□□□ 0.56
CNTD1-204ENST00000588408 CARD14Q9BXL6 1004 aa18.52■□□□□ 0.55
CNTD1-204ENST00000588408 PIK3C2GO75747 1445 aa18.51■□□□□ 0.55
CNTD1-204ENST00000588408 MYO3AQ8NEV4 1616 aa18.5■□□□□ 0.55
CNTD1-204ENST00000588408 RCAN3Q9UKA8 241 aa18.49■□□□□ 0.55
CNTD1-204ENST00000588408 RRP1P56182 461 aaKnown RBP18.48■□□□□ 0.55
CNTD1-204ENST00000588408 BCL11AQ9H165 835 aa18.48■□□□□ 0.55
CNTD1-204ENST00000588408 C14orf93Q9H972 538 aaKnown RBP18.48■□□□□ 0.55
CNTD1-204ENST00000588408 ADGRB1O14514 1584 aa18.47■□□□□ 0.55
CNTD1-204ENST00000588408 SETBP1Q9Y6X0 1596 aa18.47■□□□□ 0.55
CNTD1-204ENST00000588408 CENPJQ9HC77 1338 aaPredicted RBP18.47■□□□□ 0.55
CNTD1-204ENST00000588408 ZC3H13Q5T200 1668 aaKnown RBP18.46■□□□□ 0.55
CNTD1-204ENST00000588408 QRICH2Q9H0J4 1663 aa18.46■□□□□ 0.55
CNTD1-204ENST00000588408 CCDC136Q96JN2 1154 aa18.46■□□□□ 0.55
CNTD1-204ENST00000588408 PIK3C2BO00750 1634 aa18.46■□□□□ 0.55
CNTD1-204ENST00000588408 PDE3BQ13370 1112 aa18.46■□□□□ 0.55
CNTD1-204ENST00000588408 ZMYM4Q5VZL5 1548 aa18.46■□□□□ 0.55
CNTD1-204ENST00000588408 MYO5BQ9ULV0 1848 aa18.45■□□□□ 0.54
CNTD1-204ENST00000588408 EXOC6Q8TAG9 804 aa18.45■□□□□ 0.54
CNTD1-204ENST00000588408 PLEKHH1Q9ULM0 1364 aa18.44■□□□□ 0.54
CNTD1-204ENST00000588408 INSRP06213 1382 aa18.44■□□□□ 0.54
CNTD1-204ENST00000588408 TSPOAP1O95153 1857 aa18.44■□□□□ 0.54
CNTD1-204ENST00000588408 IDI1Q13907 227 aa18.44■□□□□ 0.54
CNTD1-204ENST00000588408 WDR43Q15061 677 aaKnown RBP eCLIP18.44■□□□□ 0.54
CNTD1-204ENST00000588408 PLIN1O60240 522 aa18.43■□□□□ 0.54
CNTD1-204ENST00000588408 NEXMIFQ5QGS0 1516 aa18.42■□□□□ 0.54
CNTD1-204ENST00000588408 CCDC146Q8IYE0 955 aa18.42■□□□□ 0.54
CNTD1-204ENST00000588408 SLC12A5Q9H2X9 1139 aa18.42■□□□□ 0.54
CNTD1-204ENST00000588408 NPC1L1Q9UHC9 1359 aa18.42■□□□□ 0.54
CNTD1-204ENST00000588408 RIMBP3CA6NJZ7 1639 aa18.41■□□□□ 0.54
CNTD1-204ENST00000588408 RIMBP3BA6NNM3 1639 aa18.41■□□□□ 0.54
CNTD1-204ENST00000588408 RIMBP3Q9UFD9 1639 aa18.41■□□□□ 0.54
CNTD1-204ENST00000588408 SBNO2Q9Y2G9 1366 aa18.41■□□□□ 0.54
CNTD1-204ENST00000588408 GLI2P10070 1586 aa18.4■□□□□ 0.54
CNTD1-204ENST00000588408 MSH5O43196 834 aa18.4■□□□□ 0.54
CNTD1-204ENST00000588408 FAM69CQ0P6D2 419 aa18.4■□□□□ 0.54
CNTD1-204ENST00000588408 RPGRIP1LQ68CZ1 1315 aa18.4■□□□□ 0.54
CNTD1-204ENST00000588408 SAFB2Q14151 953 aaKnown RBP eCLIP18.38■□□□□ 0.53
CNTD1-204ENST00000588408 FBXO31Q5XUX0 539 aaPredicted RBP18.38■□□□□ 0.53
CNTD1-204ENST00000588408 ARHGEF28Q8N1W1 1705 aaKnown RBP18.38■□□□□ 0.53
CNTD1-204ENST00000588408 TNNT2P45379 298 aaPredicted RBP18.37■□□□□ 0.53
CNTD1-204ENST00000588408 PREX1Q8TCU6 1659 aa18.37■□□□□ 0.53
CNTD1-204ENST00000588408 ARHGAP31Q2M1Z3 1444 aa18.37■□□□□ 0.53
CNTD1-204ENST00000588408 NSD3Q9BZ95 1437 aa18.37■□□□□ 0.53
CNTD1-204ENST00000588408 SLC24A1O60721 1099 aa18.35■□□□□ 0.53
CNTD1-204ENST00000588408 DIP2BQ9P265 1576 aa18.35■□□□□ 0.53
CNTD1-204ENST00000588408 VGFO15240 615 aaPredicted RBP18.35■□□□□ 0.53
CNTD1-204ENST00000588408 ZNF521Q96K83 1311 aa18.35■□□□□ 0.53
CNTD1-204ENST00000588408 STK26Q9P289 416 aa18.34■□□□□ 0.53
CNTD1-204ENST00000588408 TULP4Q9NRJ4 1543 aa18.34■□□□□ 0.53
CNTD1-204ENST00000588408 APAF1O14727 1248 aa18.33■□□□□ 0.53
CNTD1-204ENST00000588408 DUSP27Q5VZP5 1158 aa18.33■□□□□ 0.53
CNTD1-204ENST00000588408 SPINK5Q9NQ38 1064 aaPredicted RBP18.33■□□□□ 0.52
CNTD1-204ENST00000588408 TMEM131LA2VDJ0 1609 aa18.33■□□□□ 0.52
CNTD1-204ENST00000588408 C20orf194Q5TEA3 1177 aa18.32■□□□□ 0.52
CNTD1-204ENST00000588408 CABP2Q9NPB3 220 aa18.32■□□□□ 0.52
CNTD1-204ENST00000588408 ANP32EQ9BTT0 268 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms