RNA–Protein interactions for RNA: ENST00000588276.5

BECN1-208, Transcript of beclin 1, humanhuman

TSL 3

Gene BECN1, Length 769 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-208ENST00000588276 CCDC102AQ96A19 550 aa13.34□□□□□ -0.27
BECN1-208ENST00000588276 OATP04181 439 aa13.33□□□□□ -0.28
BECN1-208ENST00000588276 SMAPO00193 183 aa13.32□□□□□ -0.28
BECN1-208ENST00000588276 LAPTM4BQ86VI4 370 aa13.32□□□□□ -0.28
BECN1-208ENST00000588276 RBM46Q8TBY0 533 aaKnown RBP13.32□□□□□ -0.28
BECN1-208ENST00000588276 EYA1Q99502 592 aa13.32□□□□□ -0.28
BECN1-208ENST00000588276 SEPT9Q9UHD8 586 aaPredicted RBP13.32□□□□□ -0.28
BECN1-208ENST00000588276 CUX2O14529 1486 aa13.31□□□□□ -0.28
BECN1-208ENST00000588276 MRPL50Q8N5N7 158 aaKnown RBP13.31□□□□□ -0.28
BECN1-208ENST00000588276 BAZ1BQ9UIG0 1483 aaKnown RBP13.3□□□□□ -0.28
BECN1-208ENST00000588276 METTL3Q86U44 580 aaKnown RBP13.3□□□□□ -0.28
BECN1-208ENST00000588276 PXYLP1Q8TE99 480 aa13.3□□□□□ -0.28
BECN1-208ENST00000588276 FAM98CQ17RN3 349 aaKnown RBP13.29□□□□□ -0.28
BECN1-208ENST00000588276 STAC3Q96MF2 364 aa13.29□□□□□ -0.28
BECN1-208ENST00000588276 AK7Q96M32 723 aa13.28□□□□□ -0.28
BECN1-208ENST00000588276 GPBP1L1Q9HC44 474 aaPredicted RBP13.27□□□□□ -0.29
BECN1-208ENST00000588276 PEG3Q9GZU2 1588 aa13.26□□□□□ -0.29
BECN1-208ENST00000588276 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.24□□□□□ -0.29
BECN1-208ENST00000588276 RCCD1A6NED2 376 aa13.24□□□□□ -0.29
BECN1-208ENST00000588276 DNAJB2P25686 324 aa13.24□□□□□ -0.29
BECN1-208ENST00000588276 PHOX2BQ99453 314 aa13.24□□□□□ -0.29
BECN1-208ENST00000588276 SPNS2Q8IVW8 549 aa13.23□□□□□ -0.29
BECN1-208ENST00000588276 ZFRQ96KR1 1074 aaKnown RBP13.23□□□□□ -0.29
BECN1-208ENST00000588276 GOLGA8CPA6NN73 597 aa13.22□□□□□ -0.29
BECN1-208ENST00000588276 TRIM66O15016 1216 aa13.21□□□□□ -0.29
BECN1-208ENST00000588276 IL27Q8NEV9 243 aa13.21□□□□□ -0.29
BECN1-208ENST00000588276 TMEM134Q9H6X4 195 aa13.2□□□□□ -0.3
BECN1-208ENST00000588276 LAMC3Q9Y6N6 1575 aa13.2□□□□□ -0.3
BECN1-208ENST00000588276 AMHR2Q16671 573 aa13.19□□□□□ -0.3
BECN1-208ENST00000588276 ZMYND15Q9H091 742 aa13.19□□□□□ -0.3
BECN1-208ENST00000588276 PLSCR2Q9NRY7 297 aa13.19□□□□□ -0.3
BECN1-208ENST00000588276 PDS5BQ9NTI5 1447 aa13.19□□□□□ -0.3
BECN1-208ENST00000588276 NLRP7Q8WX94 980 aa13.18□□□□□ -0.3
BECN1-208ENST00000588276 KDM4CQ9H3R0 1056 aa13.18□□□□□ -0.3
BECN1-208ENST00000588276 MYT1LQ9UL68 1186 aa13.18□□□□□ -0.3
BECN1-208ENST00000588276 ANKK1Q8NFD2 765 aa13.17□□□□□ -0.3
BECN1-208ENST00000588276 SWT1Q5T5J6 900 aaKnown RBP13.16□□□□□ -0.3
BECN1-208ENST00000588276 SAMD7Q7Z3H4 446 aa13.16□□□□□ -0.3
BECN1-208ENST00000588276 WNT2BQ93097 391 aa13.16□□□□□ -0.3
BECN1-208ENST00000588276 UBTFP17480 764 aaKnown RBP13.15□□□□□ -0.3
BECN1-208ENST00000588276 HDGFP51858 240 aaKnown RBP13.15□□□□□ -0.3
BECN1-208ENST00000588276 MDM2Q00987 491 aaPredicted RBP13.15□□□□□ -0.3
BECN1-208ENST00000588276 MROH2BQ7Z745 1585 aa13.15□□□□□ -0.3
BECN1-208ENST00000588276 LRCH3Q96II8 777 aa13.14□□□□□ -0.31
BECN1-208ENST00000588276 PODXL2Q9NZ53 605 aa13.14□□□□□ -0.31
BECN1-208ENST00000588276 CLCN1P35523 988 aa13.13□□□□□ -0.31
BECN1-208ENST00000588276 PDE4DQ08499 809 aa13.13□□□□□ -0.31
BECN1-208ENST00000588276 KCTD12Q96CX2 325 aaKnown RBP13.13□□□□□ -0.31
BECN1-208ENST00000588276 RSPH6AQ9H0K4 717 aa13.13□□□□□ -0.31
BECN1-208ENST00000588276 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.13□□□□□ -0.31
BECN1-208ENST00000588276 SOWAHBA6NEL2 793 aa13.12□□□□□ -0.31
BECN1-208ENST00000588276 TMUB1Q9BVT8 246 aa13.12□□□□□ -0.31
BECN1-208ENST00000588276 GPCPD1Q9NPB8 672 aa13.12□□□□□ -0.31
BECN1-208ENST00000588276 TTLL12Q14166 644 aaPredicted RBP13.11□□□□□ -0.31
BECN1-208ENST00000588276 RNF166Q96A37 237 aaPredicted RBP13.11□□□□□ -0.31
BECN1-208ENST00000588276 BCAMP50895 628 aa13.1□□□□□ -0.31
BECN1-208ENST00000588276 THSD4Q6ZMP0 1018 aa13.1□□□□□ -0.31
BECN1-208ENST00000588276 SLF2Q8IX21 1173 aa13.1□□□□□ -0.31
BECN1-208ENST00000588276 PARP9Q8IXQ6 854 aa13.1□□□□□ -0.31
BECN1-208ENST00000588276 NESP48681 1621 aa13.1□□□□□ -0.31
BECN1-208ENST00000588276 CADPSQ9ULU8 1353 aa13.09□□□□□ -0.31
BECN1-208ENST00000588276 SLC4A3P48751 1232 aa13.09□□□□□ -0.31
BECN1-208ENST00000588276 REPIN1Q9BWE0 567 aaKnown RBP13.09□□□□□ -0.31
BECN1-208ENST00000588276 MMRN1Q13201 1228 aa13.08□□□□□ -0.32
BECN1-208ENST00000588276 RNF40O75150 1001 aa13.06□□□□□ -0.32
BECN1-208ENST00000588276 GIGYF2Q6Y7W6 1299 aaKnown RBP13.05□□□□□ -0.32
BECN1-208ENST00000588276 SULF1Q8IWU6 871 aa13.05□□□□□ -0.32
BECN1-208ENST00000588276 FAM217BQ9NTX9 383 aaPredicted RBP13.04□□□□□ -0.32
BECN1-208ENST00000588276 TSR3Q9UJK0 312 aaKnown RBP13.04□□□□□ -0.32
BECN1-208ENST00000588276 HPS5Q9UPZ3 1129 aa13.04□□□□□ -0.32
BECN1-208ENST00000588276 DDX11L8A8MPP1 907 aa13.03□□□□□ -0.32
BECN1-208ENST00000588276 NECTIN2Q92692 538 aa13.03□□□□□ -0.32
BECN1-208ENST00000588276 SLC10A3P09131 477 aa13.01□□□□□ -0.33
BECN1-208ENST00000588276 PPP4CP60510 307 aa13.01□□□□□ -0.33
BECN1-208ENST00000588276 WIZO95785 1651 aa13□□□□□ -0.33
BECN1-208ENST00000588276 RSPH4AQ5TD94 716 aa13□□□□□ -0.33
BECN1-208ENST00000588276 RDH13Q8NBN7 331 aa13□□□□□ -0.33
BECN1-208ENST00000588276 CD46P15529 392 aa12.99□□□□□ -0.33
BECN1-208ENST00000588276 SSTR3P32745 418 aaPredicted RBP12.99□□□□□ -0.33
BECN1-208ENST00000588276 FAM117AQ9C073 453 aa12.99□□□□□ -0.33
BECN1-208ENST00000588276 WBP1LQ9NX94 342 aa12.99□□□□□ -0.33
BECN1-208ENST00000588276 PTPN5P54829 565 aa12.98□□□□□ -0.33
BECN1-208ENST00000588276 KIF21AQ7Z4S6 1674 aa12.97□□□□□ -0.33
BECN1-208ENST00000588276 MS4A1P11836 297 aa12.97□□□□□ -0.33
BECN1-208ENST00000588276 ARID3AQ99856 593 aa12.97□□□□□ -0.33
BECN1-208ENST00000588276 THOC2Q8NI27 1593 aaKnown RBP12.97□□□□□ -0.33
BECN1-208ENST00000588276 HCSTQ9UBK5 93 aa12.96□□□□□ -0.33
BECN1-208ENST00000588276 CFHP08603 1231 aa12.95□□□□□ -0.34
BECN1-208ENST00000588276 TRIM26Q12899 539 aaPredicted RBP12.95□□□□□ -0.34
BECN1-208ENST00000588276 NYAP1Q6ZVC0 841 aa12.95□□□□□ -0.34
BECN1-208ENST00000588276 MRC2Q9UBG0 1479 aa12.95□□□□□ -0.34
BECN1-208ENST00000588276 RSF1Q96T23 1441 aaPredicted RBP12.94□□□□□ -0.34
BECN1-208ENST00000588276 CEP164Q9UPV0 1460 aa12.93□□□□□ -0.34
BECN1-208ENST00000588276 KMT5BQ4FZB7 885 aa12.93□□□□□ -0.34
BECN1-208ENST00000588276 PRR14Q9BWN1 585 aa12.93□□□□□ -0.34
BECN1-208ENST00000588276 C1orf115Q9H7X2 142 aa12.93□□□□□ -0.34
BECN1-208ENST00000588276 GCGRP47871 477 aa12.92□□□□□ -0.34
BECN1-208ENST00000588276 PLEKHG3A1L390 1219 aa12.91□□□□□ -0.34
BECN1-208ENST00000588276 APLP1P51693 650 aa12.91□□□□□ -0.34
BECN1-208ENST00000588276 BEGAINQ9BUH8 593 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms