RNA–Protein interactions for RNA: ENST00000587987.5

U2AF1L4-208, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 1 (best)

Gene U2AF1L4, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-208	ENST00000587987	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	14.03	□□□□□ -0.16
U2AF1L4-208	ENST00000587987	EFCAB6	Q5THR3	1501 aa		14.03	□□□□□ -0.16
U2AF1L4-208	ENST00000587987	RBM33	Q96EV2	1170 aa	Known RBP	14.02	□□□□□ -0.17
U2AF1L4-208	ENST00000587987	KANK1	Q14678	1352 aa		14.01	□□□□□ -0.17
U2AF1L4-208	ENST00000587987	KCNA6	P17658	529 aa		14.01	□□□□□ -0.17
U2AF1L4-208	ENST00000587987	PROSER2	Q86WR7	435 aa	Predicted RBP	14.01	□□□□□ -0.17
U2AF1L4-208	ENST00000587987	RAB3GAP2	Q9H2M9	1393 aa		14	□□□□□ -0.17
U2AF1L4-208	ENST00000587987	SLC26A8	Q96RN1	970 aa		14	□□□□□ -0.17
U2AF1L4-208	ENST00000587987	TRIM52	Q96A61	297 aa		13.99	□□□□□ -0.17
U2AF1L4-208	ENST00000587987	NKTR	P30414	1462 aa	Known RBP	13.99	□□□□□ -0.17
U2AF1L4-208	ENST00000587987	PHLPP1	O60346	1717 aa		13.98	□□□□□ -0.17
U2AF1L4-208	ENST00000587987	KDM5A	P29375	1690 aa	Known RBP	13.98	□□□□□ -0.17
U2AF1L4-208	ENST00000587987	NWD1	Q149M9	1564 aa		13.98	□□□□□ -0.17
U2AF1L4-208	ENST00000587987	TET3	O43151	1660 aa		13.98	□□□□□ -0.17
U2AF1L4-208	ENST00000587987	NUP155	O75694	1391 aa		13.97	□□□□□ -0.17
U2AF1L4-208	ENST00000587987	MSH6	P52701	1360 aa		13.97	□□□□□ -0.17
U2AF1L4-208	ENST00000587987	ADGRB3	O60242	1522 aa		13.97	□□□□□ -0.17
U2AF1L4-208	ENST00000587987	BCAN	Q96GW7	911 aa		13.97	□□□□□ -0.17
U2AF1L4-208	ENST00000587987	IDI1	Q13907	227 aa		13.96	□□□□□ -0.17
U2AF1L4-208	ENST00000587987	JCAD	Q9P266	1359 aa		13.96	□□□□□ -0.18
U2AF1L4-208	ENST00000587987	UNC13B	O14795	1591 aa		13.95	□□□□□ -0.18
U2AF1L4-208	ENST00000587987	LMTK2	Q8IWU2	1503 aa		13.95	□□□□□ -0.18
U2AF1L4-208	ENST00000587987	SLAIN2	Q9P270	581 aa		13.93	□□□□□ -0.18
U2AF1L4-208	ENST00000587987	MPHOSPH9	Q99550	1183 aa		13.92	□□□□□ -0.18
U2AF1L4-208	ENST00000587987	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.92	□□□□□ -0.18
U2AF1L4-208	ENST00000587987	COL16A1	Q07092	1604 aa	Predicted RBP	13.92	□□□□□ -0.18
U2AF1L4-208	ENST00000587987	NOS1	P29475	1434 aa		13.91	□□□□□ -0.18
U2AF1L4-208	ENST00000587987	LRP6	O75581	1613 aa		13.91	□□□□□ -0.18
U2AF1L4-208	ENST00000587987	MEX3C	Q5U5Q3	659 aa	Known RBP	13.91	□□□□□ -0.18
U2AF1L4-208	ENST00000587987	IQGAP3	Q86VI3	1631 aa		13.9	□□□□□ -0.19
U2AF1L4-208	ENST00000587987	PPP1R15A	O75807	674 aa	Predicted RBP	13.89	□□□□□ -0.19
U2AF1L4-208	ENST00000587987	C14orf37	Q86TY3	774 aa		13.89	□□□□□ -0.19
U2AF1L4-208	ENST00000587987	PLEKHG1	Q9ULL1	1385 aa		13.88	□□□□□ -0.19
U2AF1L4-208	ENST00000587987	CHD2	O14647	1828 aa	Known RBP	13.87	□□□□□ -0.19
U2AF1L4-208	ENST00000587987	MYO5B	Q9ULV0	1848 aa		13.87	□□□□□ -0.19
U2AF1L4-208	ENST00000587987	UPF1	Q92900	1129 aa	Known RBP eCLIP	13.87	□□□□□ -0.19
U2AF1L4-208	ENST00000587987	SLC52A1	Q9NWF4	448 aa		13.87	□□□□□ -0.19
U2AF1L4-208	ENST00000587987	ZFYVE9	O95405	1425 aa		13.87	□□□□□ -0.19
U2AF1L4-208	ENST00000587987	RIMS2	Q9UQ26	1411 aa		13.87	□□□□□ -0.19
U2AF1L4-208	ENST00000587987	SPATA31A6	Q5VVP1	1343 aa		13.87	□□□□□ -0.19
U2AF1L4-208	ENST00000587987	ZNF772	Q68DY9	489 aa	Predicted RBP	13.86	□□□□□ -0.19
U2AF1L4-208	ENST00000587987	RPRD2	Q5VT52	1461 aa	Known RBP	13.86	□□□□□ -0.19
U2AF1L4-208	ENST00000587987	AHDC1	Q5TGY3	1603 aa	Predicted RBP	13.85	□□□□□ -0.19
U2AF1L4-208	ENST00000587987	SHPRH	Q149N8	1683 aa		13.85	□□□□□ -0.19
U2AF1L4-208	ENST00000587987	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	13.83	□□□□□ -0.2
U2AF1L4-208	ENST00000587987	CLSPN	Q9HAW4	1339 aa		13.83	□□□□□ -0.2
U2AF1L4-208	ENST00000587987	TMEM131L	A2VDJ0	1609 aa		13.82	□□□□□ -0.2
U2AF1L4-208	ENST00000587987	NCOA3	Q9Y6Q9	1424 aa		13.82	□□□□□ -0.2
U2AF1L4-208	ENST00000587987	CHGA	P10645	457 aa	Known RBP	13.82	□□□□□ -0.2
U2AF1L4-208	ENST00000587987	ATF3	P18847	181 aa		13.82	□□□□□ -0.2
U2AF1L4-208	ENST00000587987	HDGF	P51858	240 aa	Known RBP	13.82	□□□□□ -0.2
U2AF1L4-208	ENST00000587987	DHX57	Q6P158	1386 aa	Known RBP	13.82	□□□□□ -0.2
U2AF1L4-208	ENST00000587987	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.81	□□□□□ -0.2
U2AF1L4-208	ENST00000587987	NUTM2E	B1AL46	878 aa	Predicted RBP	13.81	□□□□□ -0.2
U2AF1L4-208	ENST00000587987	RXRB	P28702	533 aa		13.81	□□□□□ -0.2
U2AF1L4-208	ENST00000587987	NUTM2D	Q5VT03	806 aa	Predicted RBP	13.81	□□□□□ -0.2
U2AF1L4-208	ENST00000587987	CADPS2	Q86UW7	1296 aa		13.81	□□□□□ -0.2
U2AF1L4-208	ENST00000587987	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.81	□□□□□ -0.2
U2AF1L4-208	ENST00000587987	TBX22	Q9Y458	520 aa		13.81	□□□□□ -0.2
U2AF1L4-208	ENST00000587987	ADAMTS13	Q76LX8	1427 aa		13.8	□□□□□ -0.2
U2AF1L4-208	ENST00000587987	DIP2A	Q14689	1571 aa		13.79	□□□□□ -0.2
U2AF1L4-208	ENST00000587987	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	13.79	□□□□□ -0.2
U2AF1L4-208	ENST00000587987	CCER1	Q8TC90	406 aa	Predicted RBP	13.79	□□□□□ -0.2
U2AF1L4-208	ENST00000587987	C19orf44	Q9H6X5	657 aa		13.79	□□□□□ -0.2
U2AF1L4-208	ENST00000587987		E9PCH4	1651 aa		13.78	□□□□□ -0.2
U2AF1L4-208	ENST00000587987	TRPM2	O94759	1503 aa		13.77	□□□□□ -0.21
U2AF1L4-208	ENST00000587987	AFF2	P51816	1311 aa		13.77	□□□□□ -0.21
U2AF1L4-208	ENST00000587987	BRINP3	Q76B58	766 aa		13.77	□□□□□ -0.21
U2AF1L4-208	ENST00000587987	ANKRD30B	Q9BXX2	1392 aa		13.77	□□□□□ -0.21
U2AF1L4-208	ENST00000587987	CDK12	Q9NYV4	1490 aa	Predicted RBP	13.77	□□□□□ -0.21
U2AF1L4-208	ENST00000587987	ASXL1	Q8IXJ9	1541 aa		13.76	□□□□□ -0.21
U2AF1L4-208	ENST00000587987	PIK3R4	Q99570	1358 aa		13.76	□□□□□ -0.21
U2AF1L4-208	ENST00000587987	FOXD1	Q16676	465 aa		13.76	□□□□□ -0.21
U2AF1L4-208	ENST00000587987	AMOTL2	Q9Y2J4	779 aa		13.74	□□□□□ -0.21
U2AF1L4-208	ENST00000587987	CCDC144A	A2RUR9	1427 aa		13.73	□□□□□ -0.21
U2AF1L4-208	ENST00000587987	RGS12	O14924	1447 aa		13.73	□□□□□ -0.21
U2AF1L4-208	ENST00000587987	PTPRU	Q92729	1446 aa		13.73	□□□□□ -0.21
U2AF1L4-208	ENST00000587987	SPHKAP	Q2M3C7	1700 aa		13.73	□□□□□ -0.21
U2AF1L4-208	ENST00000587987	DCC	P43146	1447 aa		13.73	□□□□□ -0.21
U2AF1L4-208	ENST00000587987	NHSL1	Q5SYE7	1610 aa		13.72	□□□□□ -0.21
U2AF1L4-208	ENST00000587987	C8orf37	Q96NL8	207 aa		13.72	□□□□□ -0.21
U2AF1L4-208	ENST00000587987	XRN1	Q8IZH2	1706 aa	Known RBP	13.71	□□□□□ -0.21
U2AF1L4-208	ENST00000587987	MST1R	Q04912	1400 aa		13.71	□□□□□ -0.22
U2AF1L4-208	ENST00000587987	TIMELESS	Q9UNS1	1208 aa		13.7	□□□□□ -0.22
U2AF1L4-208	ENST00000587987	PNPLA6	Q8IY17	1366 aa		13.69	□□□□□ -0.22
U2AF1L4-208	ENST00000587987	NRXN3	Q9Y4C0	1643 aa		13.68	□□□□□ -0.22
U2AF1L4-208	ENST00000587987	RBM6	P78332	1123 aa	Known RBP	13.68	□□□□□ -0.22
U2AF1L4-208	ENST00000587987	DDX17	Q92841	729 aa	Known RBP	13.68	□□□□□ -0.22
U2AF1L4-208	ENST00000587987	LRRC59	Q96AG4	307 aa	Known RBP	13.68	□□□□□ -0.22
U2AF1L4-208	ENST00000587987	STAC3	Q96MF2	364 aa		13.68	□□□□□ -0.22
U2AF1L4-208	ENST00000587987	QTRT2	Q9H974	415 aa	Known RBP	13.68	□□□□□ -0.22
U2AF1L4-208	ENST00000587987	SETBP1	Q9Y6X0	1596 aa		13.66	□□□□□ -0.22
U2AF1L4-208	ENST00000587987	RPGRIP1L	Q68CZ1	1315 aa		13.66	□□□□□ -0.22
U2AF1L4-208	ENST00000587987	ADAMTS2	O95450	1211 aa		13.66	□□□□□ -0.22
U2AF1L4-208	ENST00000587987	NEUROD1	Q13562	356 aa		13.66	□□□□□ -0.22
U2AF1L4-208	ENST00000587987	ADGRL3	Q9HAR2	1447 aa		13.65	□□□□□ -0.22
U2AF1L4-208	ENST00000587987	KIF1B	O60333	1816 aa		13.65	□□□□□ -0.22
U2AF1L4-208	ENST00000587987	SIN3A	Q96ST3	1273 aa		13.65	□□□□□ -0.22
U2AF1L4-208	ENST00000587987	NALCN	Q8IZF0	1738 aa		13.64	□□□□□ -0.23
U2AF1L4-208	ENST00000587987	MET	P08581	1390 aa		13.64	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms