RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 FAM161AQ3B820 660 aa10.87□□□□□ -0.67
VMP1-205ENST00000587470 NECTIN2Q92692 538 aa10.87□□□□□ -0.67
VMP1-205ENST00000587470 RNF40O75150 1001 aa10.86□□□□□ -0.67
VMP1-205ENST00000587470 PPP1R18Q6NYC8 613 aa10.86□□□□□ -0.67
VMP1-205ENST00000587470 SLF2Q8IX21 1173 aa10.86□□□□□ -0.67
VMP1-205ENST00000587470 NKX2-3Q8TAU0 364 aa10.86□□□□□ -0.67
VMP1-205ENST00000587470 FECHP22830 423 aa10.85□□□□□ -0.67
VMP1-205ENST00000587470 RCCD1A6NED2 376 aa10.84□□□□□ -0.67
VMP1-205ENST00000587470 TMEM134Q9H6X4 195 aa10.84□□□□□ -0.67
VMP1-205ENST00000587470 PXYLP1Q8TE99 480 aa10.83□□□□□ -0.68
VMP1-205ENST00000587470 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.82□□□□□ -0.68
VMP1-205ENST00000587470 METTL3Q86U44 580 aaKnown RBP10.8□□□□□ -0.68
VMP1-205ENST00000587470 PRKD2Q9BZL6 878 aa10.8□□□□□ -0.68
VMP1-205ENST00000587470 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.8□□□□□ -0.68
VMP1-205ENST00000587470 COPS2P61201 443 aa10.79□□□□□ -0.68
VMP1-205ENST00000587470 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.79□□□□□ -0.68
VMP1-205ENST00000587470 Q6ZNB5 142 aa10.78□□□□□ -0.68
VMP1-205ENST00000587470 V9GY48 417 aaPredicted RBP10.78□□□□□ -0.68
VMP1-205ENST00000587470 ZPR1O75312 459 aa10.76□□□□□ -0.69
VMP1-205ENST00000587470 EMID1Q96A84 441 aaPredicted RBP10.76□□□□□ -0.69
VMP1-205ENST00000587470 PRR14Q9BWN1 585 aa10.76□□□□□ -0.69
VMP1-205ENST00000587470 GFRA3O60609 400 aa10.74□□□□□ -0.69
VMP1-205ENST00000587470 LAPTM4AQ15012 233 aa10.74□□□□□ -0.69
VMP1-205ENST00000587470 BLOC1S3Q6QNY0 202 aa10.74□□□□□ -0.69
VMP1-205ENST00000587470 SLC10A3P09131 477 aa10.73□□□□□ -0.69
VMP1-205ENST00000587470 MAP2K5Q13163 448 aa10.72□□□□□ -0.69
VMP1-205ENST00000587470 LMOD2Q6P5Q4 547 aa10.72□□□□□ -0.69
VMP1-205ENST00000587470 DAXXQ9UER7 740 aaPredicted RBP10.72□□□□□ -0.69
VMP1-205ENST00000587470 RSPH4AQ5TD94 716 aa10.71□□□□□ -0.69
VMP1-205ENST00000587470 PCDHB3Q9Y5E6 796 aa10.71□□□□□ -0.69
VMP1-205ENST00000587470 MINK1Q8N4C8 1332 aaPredicted RBP10.7□□□□□ -0.7
VMP1-205ENST00000587470 IRF6O14896 467 aa10.7□□□□□ -0.7
VMP1-205ENST00000587470 KMT5BQ4FZB7 885 aa10.7□□□□□ -0.7
VMP1-205ENST00000587470 TMUB1Q9BVT8 246 aa10.7□□□□□ -0.7
VMP1-205ENST00000587470 NRG2O14511 850 aaPredicted RBP10.69□□□□□ -0.7
VMP1-205ENST00000587470 ACTN4O43707 911 aaKnown RBP10.69□□□□□ -0.7
VMP1-205ENST00000587470 TLL1O43897 1013 aa10.69□□□□□ -0.7
VMP1-205ENST00000587470 PHOX2BQ99453 314 aa10.69□□□□□ -0.7
VMP1-205ENST00000587470 RNF223E7ERA6 249 aa10.68□□□□□ -0.7
VMP1-205ENST00000587470 CFHP08603 1231 aa10.67□□□□□ -0.7
VMP1-205ENST00000587470 TRIM67Q6ZTA4 783 aa10.67□□□□□ -0.7
VMP1-205ENST00000587470 NLRP7Q8WX94 980 aa10.67□□□□□ -0.7
VMP1-205ENST00000587470 TRAF7Q6Q0C0 670 aa10.66□□□□□ -0.7
VMP1-205ENST00000587470 DDX11L8A8MPP1 907 aa10.64□□□□□ -0.71
VMP1-205ENST00000587470 SULF1Q8IWU6 871 aa10.64□□□□□ -0.71
VMP1-205ENST00000587470 GGCXP38435 758 aa10.63□□□□□ -0.71
VMP1-205ENST00000587470 RDH13Q8NBN7 331 aa10.63□□□□□ -0.71
VMP1-205ENST00000587470 SLC24A1O60721 1099 aa10.61□□□□□ -0.71
VMP1-205ENST00000587470 ZC3H15Q8WU90 426 aaKnown RBP10.61□□□□□ -0.71
VMP1-205ENST00000587470 CCDC102AQ96A19 550 aa10.61□□□□□ -0.71
VMP1-205ENST00000587470 ZMYND10O75800 440 aa10.6□□□□□ -0.71
VMP1-205ENST00000587470 BARGINQ6ZT62 677 aa10.6□□□□□ -0.71
VMP1-205ENST00000587470 KRI1Q8N9T8 703 aaKnown RBP10.6□□□□□ -0.71
VMP1-205ENST00000587470 PDZRN3Q9UPQ7 1066 aa10.6□□□□□ -0.71
VMP1-205ENST00000587470 PPEF1O14829 653 aaPredicted RBP10.59□□□□□ -0.71
VMP1-205ENST00000587470 S1PR4O95977 384 aa10.59□□□□□ -0.71
VMP1-205ENST00000587470 ANKLE1Q8NAG6 615 aa10.59□□□□□ -0.71
VMP1-205ENST00000587470 ADH1BP00325 375 aa10.58□□□□□ -0.72
VMP1-205ENST00000587470 SLC19A1P41440 591 aa10.58□□□□□ -0.72
VMP1-205ENST00000587470 GCGRP47871 477 aa10.58□□□□□ -0.72
VMP1-205ENST00000587470 LIAT1Q6ZQX7 453 aa10.58□□□□□ -0.72
VMP1-205ENST00000587470 NR1I2O75469 434 aa10.57□□□□□ -0.72
VMP1-205ENST00000587470 MDM2Q00987 491 aaPredicted RBP10.57□□□□□ -0.72
VMP1-205ENST00000587470 PLA2G2CQ5R387 149 aa10.57□□□□□ -0.72
VMP1-205ENST00000587470 SPRYD7Q5W111 196 aa10.57□□□□□ -0.72
VMP1-205ENST00000587470 SCUBE3Q8IX30 993 aa10.55□□□□□ -0.72
VMP1-205ENST00000587470 CLCN1P35523 988 aa10.54□□□□□ -0.72
VMP1-205ENST00000587470 ATP6V1AP38606 617 aa10.54□□□□□ -0.72
VMP1-205ENST00000587470 FUT2Q10981 343 aa10.54□□□□□ -0.72
VMP1-205ENST00000587470 PUS10Q3MIT2 529 aaKnown RBP10.54□□□□□ -0.72
VMP1-205ENST00000587470 CD46P15529 392 aa10.53□□□□□ -0.72
VMP1-205ENST00000587470 ZNF598Q86UK7 904 aaKnown RBP10.53□□□□□ -0.72
VMP1-205ENST00000587470 GPCPD1Q9NPB8 672 aa10.53□□□□□ -0.72
VMP1-205ENST00000587470 PRR20EP86478 221 aa10.52□□□□□ -0.73
VMP1-205ENST00000587470 PRR20CP86479 221 aa10.52□□□□□ -0.73
VMP1-205ENST00000587470 PRR20DP86480 221 aa10.52□□□□□ -0.73
VMP1-205ENST00000587470 PRR20BP86481 221 aa10.52□□□□□ -0.73
VMP1-205ENST00000587470 PRR20AP86496 221 aa10.52□□□□□ -0.73
VMP1-205ENST00000587470 THAP11Q96EK4 314 aa10.52□□□□□ -0.73
VMP1-205ENST00000587470 GDF9O60383 454 aa10.51□□□□□ -0.73
VMP1-205ENST00000587470 MORN1Q5T089 497 aa10.51□□□□□ -0.73
VMP1-205ENST00000587470 GRIPAP1Q4V328 841 aa10.5□□□□□ -0.73
VMP1-205ENST00000587470 SLC6A16Q9GZN6 736 aa10.5□□□□□ -0.73
VMP1-205ENST00000587470 FAM217BQ9NTX9 383 aaPredicted RBP10.49□□□□□ -0.73
VMP1-205ENST00000587470 BCANQ96GW7 911 aa10.48□□□□□ -0.73
VMP1-205ENST00000587470 ZNF697Q5TEC3 545 aa10.47□□□□□ -0.73
VMP1-205ENST00000587470 SPSB2Q99619 263 aa10.47□□□□□ -0.73
VMP1-205ENST00000587470 SLC27A5Q9Y2P5 690 aa10.47□□□□□ -0.73
VMP1-205ENST00000587470 KDM4AO75164 1064 aa10.46□□□□□ -0.73
VMP1-205ENST00000587470 MYT1Q01538 1121 aa10.46□□□□□ -0.73
VMP1-205ENST00000587470 AMHR2Q16671 573 aa10.46□□□□□ -0.73
VMP1-205ENST00000587470 REPIN1Q9BWE0 567 aaKnown RBP10.46□□□□□ -0.73
VMP1-205ENST00000587470 SALL2Q9Y467 1007 aaPredicted RBP10.46□□□□□ -0.73
VMP1-205ENST00000587470 FAM160A2Q8N612 972 aaPredicted RBP10.45□□□□□ -0.74
VMP1-205ENST00000587470 AK7Q96M32 723 aa10.45□□□□□ -0.74
VMP1-205ENST00000587470 FMNL1O95466 1100 aaPredicted RBP10.44□□□□□ -0.74
VMP1-205ENST00000587470 USP46P62068 366 aa10.44□□□□□ -0.74
VMP1-205ENST00000587470 TTLL12Q14166 644 aaPredicted RBP10.44□□□□□ -0.74
VMP1-205ENST00000587470 PKD2L1Q9P0L9 805 aa10.44□□□□□ -0.74
VMP1-205ENST00000587470 SSTR3P32745 418 aaPredicted RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms