RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 MAGI2Q86UL8 1455 aa21.35■■□□□ 1.01
RANBP3-209ENST00000587411 PIK3C2GO75747 1445 aa21.35■■□□□ 1.01
RANBP3-209ENST00000587411 TRMT2AQ8IZ69 625 aaKnown RBP21.33■■□□□ 1.01
RANBP3-209ENST00000587411 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.33■■□□□ 1.01
RANBP3-209ENST00000587411 FRAT2O75474 233 aaPredicted RBP21.33■■□□□ 1.01
RANBP3-209ENST00000587411 CDCA8Q53HL2 280 aa21.32■■□□□ 1
RANBP3-209ENST00000587411 RGS3P49796 1198 aa21.32■■□□□ 1
RANBP3-209ENST00000587411 AMER1Q5JTC6 1135 aaPredicted RBP21.32■■□□□ 1
RANBP3-209ENST00000587411 SYNMO15061 1565 aa21.31■■□□□ 1
RANBP3-209ENST00000587411 NKTRP30414 1462 aaKnown RBP21.3■■□□□ 1
RANBP3-209ENST00000587411 NPC1L1Q9UHC9 1359 aa21.3■■□□□ 1
RANBP3-209ENST00000587411 CDC42BPBQ9Y5S2 1711 aa21.3■■□□□ 1
RANBP3-209ENST00000587411 ABCC2Q92887 1545 aa21.3■■□□□ 1
RANBP3-209ENST00000587411 ASXL1Q8IXJ9 1541 aa21.29■■□□□ 1
RANBP3-209ENST00000587411 PLXNC1O60486 1568 aa21.29■■□□□ 1
RANBP3-209ENST00000587411 FAM43AQ8N2R8 423 aa21.29■■□□□ 1
RANBP3-209ENST00000587411 NGEFQ8N5V2 710 aa21.27■■□□□ 1
RANBP3-209ENST00000587411 ERCC6Q03468 1493 aa21.27■■□□□ 1
RANBP3-209ENST00000587411 NINLQ9Y2I6 1382 aa21.27■■□□□ 1
RANBP3-209ENST00000587411 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.27■■□□□ 19e-8■□□□□ 8.3
RANBP3-209ENST00000587411 SYCP2Q9BX26 1530 aa21.26■□□□□ 0.99
RANBP3-209ENST00000587411 VIRMAQ69YN4 1812 aaKnown RBP21.26■□□□□ 0.99
RANBP3-209ENST00000587411 IQGAP1P46940 1657 aa21.26■□□□□ 0.99
RANBP3-209ENST00000587411 MAPK8IP3Q9UPT6 1336 aa21.25■□□□□ 0.99
RANBP3-209ENST00000587411 CGNL1Q0VF96 1302 aa21.25■□□□□ 0.99
RANBP3-209ENST00000587411 E9PSI1 815 aa21.25■□□□□ 0.99
RANBP3-209ENST00000587411 BECN1Q14457 450 aa21.24■□□□□ 0.99
RANBP3-209ENST00000587411 FBLN2P98095 1184 aa21.23■□□□□ 0.99
RANBP3-209ENST00000587411 DUOX2Q9NRD8 1548 aa21.23■□□□□ 0.99
RANBP3-209ENST00000587411 PDE3AQ14432 1141 aa21.22■□□□□ 0.99
RANBP3-209ENST00000587411 USP19O94966 1318 aa21.22■□□□□ 0.99
RANBP3-209ENST00000587411 RSPH6AQ9H0K4 717 aa21.22■□□□□ 0.99
RANBP3-209ENST00000587411 MADDQ8WXG6 1647 aa21.22■□□□□ 0.99
RANBP3-209ENST00000587411 STAC3Q96MF2 364 aa21.22■□□□□ 0.99
RANBP3-209ENST00000587411 SCAF11Q99590 1463 aaKnown RBP21.21■□□□□ 0.99
RANBP3-209ENST00000587411 SCAPERQ9BY12 1400 aa21.2■□□□□ 0.98
RANBP3-209ENST00000587411 ARHGAP5Q13017 1502 aa21.19■□□□□ 0.98
RANBP3-209ENST00000587411 APAF1O14727 1248 aa21.18■□□□□ 0.98
RANBP3-209ENST00000587411 BCAR3O75815 825 aa21.18■□□□□ 0.98
RANBP3-209ENST00000587411 IGHDP01880 384 aa21.18■□□□□ 0.98
RANBP3-209ENST00000587411 CCDC146Q8IYE0 955 aa21.17■□□□□ 0.98
RANBP3-209ENST00000587411 UBE2Q2Q8WVN8 375 aa21.17■□□□□ 0.98
RANBP3-209ENST00000587411 SPINK5Q9NQ38 1064 aaPredicted RBP21.17■□□□□ 0.98
RANBP3-209ENST00000587411 ZMYM3Q14202 1370 aa21.17■□□□□ 0.98
RANBP3-209ENST00000587411 CLUAP1Q96AJ1 413 aa21.16■□□□□ 0.98
RANBP3-209ENST00000587411 AAMPQ13685 434 aa21.16■□□□□ 0.98
RANBP3-209ENST00000587411 MYOM1P52179 1685 aa21.15■□□□□ 0.98
RANBP3-209ENST00000587411 L1TD1Q5T7N2 865 aaKnown RBP21.15■□□□□ 0.98
RANBP3-209ENST00000587411 CENPJQ9HC77 1338 aaPredicted RBP21.13■□□□□ 0.97
RANBP3-209ENST00000587411 NLRP1Q9C000 1473 aa21.13■□□□□ 0.97
RANBP3-209ENST00000587411 TTC37Q6PGP7 1564 aa21.13■□□□□ 0.97
RANBP3-209ENST00000587411 SPHKAPQ2M3C7 1700 aa21.12■□□□□ 0.97
RANBP3-209ENST00000587411 EIF5BO60841 1220 aaKnown RBP21.12■□□□□ 0.97
RANBP3-209ENST00000587411 UPF2Q9HAU5 1272 aaKnown RBP21.11■□□□□ 0.97
RANBP3-209ENST00000587411 POGKQ9P215 609 aa21.11■□□□□ 0.97
RANBP3-209ENST00000587411 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.1■□□□□ 0.97
RANBP3-209ENST00000587411 KDM5AP29375 1690 aaKnown RBP21.1■□□□□ 0.97
RANBP3-209ENST00000587411 CANXP27824 592 aaKnown RBP21.1■□□□□ 0.97
RANBP3-209ENST00000587411 TRPM2O94759 1503 aa21.1■□□□□ 0.97
RANBP3-209ENST00000587411 PMFBP1Q8TBY8 1022 aa21.1■□□□□ 0.97
RANBP3-209ENST00000587411 SEC24BO95487 1268 aa21.09■□□□□ 0.97
RANBP3-209ENST00000587411 ANTXR1Q9H6X2 564 aa21.08■□□□□ 0.97
RANBP3-209ENST00000587411 COG6Q9Y2V7 657 aa21.06■□□□□ 0.96
RANBP3-209ENST00000587411 CEP152O94986 1710 aa21.05■□□□□ 0.96
RANBP3-209ENST00000587411 KIAA1210Q9ULL0 1709 aa21.05■□□□□ 0.96
RANBP3-209ENST00000587411 PANK1Q8TE04 598 aa21.05■□□□□ 0.96
RANBP3-209ENST00000587411 TBC1D32Q96NH3 1257 aa21.05■□□□□ 0.96
RANBP3-209ENST00000587411 SLKQ9H2G2 1235 aaPredicted RBP21.05■□□□□ 0.96
RANBP3-209ENST00000587411 POLR3AO14802 1390 aaPredicted RBP21.05■□□□□ 0.96
RANBP3-209ENST00000587411 DMRT2Q9Y5R5 561 aa21.05■□□□□ 0.96
RANBP3-209ENST00000587411 WWC1Q8IX03 1113 aa21.04■□□□□ 0.96
RANBP3-209ENST00000587411 PTPRTO14522 1441 aa21.04■□□□□ 0.96
RANBP3-209ENST00000587411 NEURL4Q96JN8 1562 aa20.99■□□□□ 0.95
RANBP3-209ENST00000587411 ERVK-7P63135 1459 aa20.99■□□□□ 0.95
RANBP3-209ENST00000587411 RARSP54136 660 aaKnown RBP20.99■□□□□ 0.95
RANBP3-209ENST00000587411 TBC1D2Q9BYX2 928 aa20.99■□□□□ 0.95
RANBP3-209ENST00000587411 CLTCL1P53675 1640 aa20.99■□□□□ 0.95
RANBP3-209ENST00000587411 RWDD1Q9H446 243 aaPredicted RBP20.97■□□□□ 0.95
RANBP3-209ENST00000587411 RRAGDQ9NQL2 400 aaPredicted RBP20.97■□□□□ 0.95
RANBP3-209ENST00000587411 CARD14Q9BXL6 1004 aa20.96■□□□□ 0.95
RANBP3-209ENST00000587411 PDZRN3Q9UPQ7 1066 aa20.96■□□□□ 0.95
RANBP3-209ENST00000587411 PLCH2O75038 1416 aa20.96■□□□□ 0.95
RANBP3-209ENST00000587411 GOLGA6L3A6NEY3 463 aa20.95■□□□□ 0.94
RANBP3-209ENST00000587411 WDR63Q8IWG1 891 aa20.95■□□□□ 0.94
RANBP3-209ENST00000587411 PCDHB15Q9Y5E8 787 aa20.95■□□□□ 0.94
RANBP3-209ENST00000587411 RUNDC1Q96C34 613 aa20.95■□□□□ 0.94
RANBP3-209ENST00000587411 ABCC1P33527 1531 aa20.95■□□□□ 0.94
RANBP3-209ENST00000587411 FSD2A1L4K1 749 aa20.94■□□□□ 0.94
RANBP3-209ENST00000587411 PHF23Q9BUL5 403 aaPredicted RBP20.94■□□□□ 0.94
RANBP3-209ENST00000587411 SHROOM2Q13796 1616 aa20.94■□□□□ 0.94
RANBP3-209ENST00000587411 EFCAB2Q5VUJ9 269 aa20.94■□□□□ 0.94
RANBP3-209ENST00000587411 IQSEC2Q5JU85 1478 aa20.94■□□□□ 0.94
RANBP3-209ENST00000587411 MYOM2P54296 1465 aa20.93■□□□□ 0.94
RANBP3-209ENST00000587411 MCM4P33991 863 aa20.93■□□□□ 0.94
RANBP3-209ENST00000587411 SBNO2Q9Y2G9 1366 aa20.93■□□□□ 0.94
RANBP3-209ENST00000587411 KANK1Q14678 1352 aa20.92■□□□□ 0.94
RANBP3-209ENST00000587411 RTEL1-TNFRSF6BF6WH68 1400 aa20.92■□□□□ 0.94
RANBP3-209ENST00000587411 TET3O43151 1660 aa20.92■□□□□ 0.94
RANBP3-209ENST00000587411 NCBP3Q53F19 620 aaKnown RBP20.91■□□□□ 0.94
RANBP3-209ENST00000587411 SHPRHQ149N8 1683 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms