RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 ZNF598Q86UK7 904 aaKnown RBP11.13□□□□□ -0.63
ZNF540-204ENST00000586792 MYT1Q01538 1121 aa11.12□□□□□ -0.63
ZNF540-204ENST00000586792 SPRYD7Q5W111 196 aa11.12□□□□□ -0.63
ZNF540-204ENST00000586792 EYA1Q99502 592 aa11.12□□□□□ -0.63
ZNF540-204ENST00000586792 NPDC1Q9NQX5 325 aaPredicted RBP11.12□□□□□ -0.63
ZNF540-204ENST00000586792 ANKLE1Q8NAG6 615 aa11.11□□□□□ -0.63
ZNF540-204ENST00000586792 BLOC1S3Q6QNY0 202 aa11.09□□□□□ -0.63
ZNF540-204ENST00000586792 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.08□□□□□ -0.64
ZNF540-204ENST00000586792 KMT5BQ4FZB7 885 aa11.06□□□□□ -0.64
ZNF540-204ENST00000586792 DNAJB2P25686 324 aa11.05□□□□□ -0.64
ZNF540-204ENST00000586792 ZNF697Q5TEC3 545 aa11.05□□□□□ -0.64
ZNF540-204ENST00000586792 EMID1Q96A84 441 aaPredicted RBP11.05□□□□□ -0.64
ZNF540-204ENST00000586792 FAM187AA6NFU0 413 aa11.03□□□□□ -0.64
ZNF540-204ENST00000586792 RBM46Q8TBY0 533 aaKnown RBP11.03□□□□□ -0.64
ZNF540-204ENST00000586792 ACTN4O43707 911 aaKnown RBP11.02□□□□□ -0.65
ZNF540-204ENST00000586792 TLL1O43897 1013 aa11.01□□□□□ -0.65
ZNF540-204ENST00000586792 S1PR4O95977 384 aa11.01□□□□□ -0.65
ZNF540-204ENST00000586792 LIAT1Q6ZQX7 453 aa11.01□□□□□ -0.65
ZNF540-204ENST00000586792 PPEF1O14829 653 aaPredicted RBP11□□□□□ -0.65
ZNF540-204ENST00000586792 GDF9O60383 454 aa11□□□□□ -0.65
ZNF540-204ENST00000586792 POTECB2RU33 542 aa10.99□□□□□ -0.65
ZNF540-204ENST00000586792 TMEM134Q9H6X4 195 aa10.99□□□□□ -0.65
ZNF540-204ENST00000586792 TNFRSF10AO00220 468 aa10.98□□□□□ -0.65
ZNF540-204ENST00000586792 NR1I2O75469 434 aa10.98□□□□□ -0.65
ZNF540-204ENST00000586792 ADH1BP00325 375 aa10.98□□□□□ -0.65
ZNF540-204ENST00000586792 NISCHQ9Y2I1 1504 aa10.98□□□□□ -0.65
ZNF540-204ENST00000586792 TREML4Q6UXN2 200 aa10.97□□□□□ -0.65
ZNF540-204ENST00000586792 LMOD2Q6P5Q4 547 aa10.96□□□□□ -0.65
ZNF540-204ENST00000586792 SLC6A16Q9GZN6 736 aa10.96□□□□□ -0.65
ZNF540-204ENST00000586792 CFHP08603 1231 aa10.95□□□□□ -0.66
ZNF540-204ENST00000586792 PTGDRQ13258 359 aa10.94□□□□□ -0.66
ZNF540-204ENST00000586792 AAASQ9NRG9 546 aa10.94□□□□□ -0.66
ZNF540-204ENST00000586792 RCCD1A6NED2 376 aa10.92□□□□□ -0.66
ZNF540-204ENST00000586792 CFAP44Q96MT7 982 aa10.92□□□□□ -0.66
ZNF540-204ENST00000586792 ADGRG1Q9Y653 693 aa10.92□□□□□ -0.66
ZNF540-204ENST00000586792 ST8SIA5O15466 376 aa10.9□□□□□ -0.66
ZNF540-204ENST00000586792 RSPH4AQ5TD94 716 aa10.9□□□□□ -0.66
ZNF540-204ENST00000586792 PAXIP1Q6ZW49 1069 aaPredicted RBP10.9□□□□□ -0.66
ZNF540-204ENST00000586792 CRIPAKQ8N1N5 446 aa10.89□□□□□ -0.67
ZNF540-204ENST00000586792 ARHGEF1Q92888 912 aaKnown RBP10.89□□□□□ -0.67
ZNF540-204ENST00000586792 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.88□□□□□ -0.67
ZNF540-204ENST00000586792 LCE2AQ5TA79 106 aaPredicted RBP10.88□□□□□ -0.67
ZNF540-204ENST00000586792 SCUBE3Q8IX30 993 aa10.88□□□□□ -0.67
ZNF540-204ENST00000586792 FOXC1Q12948 553 aa10.87□□□□□ -0.67
ZNF540-204ENST00000586792 SLC10A3P09131 477 aa10.86□□□□□ -0.67
ZNF540-204ENST00000586792 MLLT3P42568 568 aaPredicted RBP10.86□□□□□ -0.67
ZNF540-204ENST00000586792 RPIAP49247 311 aa10.86□□□□□ -0.67
ZNF540-204ENST00000586792 PLA2G2CQ5R387 149 aa10.86□□□□□ -0.67
ZNF540-204ENST00000586792 SPSB2Q99619 263 aa10.86□□□□□ -0.67
ZNF540-204ENST00000586792 CD2BP2O95400 341 aaKnown RBP10.85□□□□□ -0.67
ZNF540-204ENST00000586792 PKD2L1Q9P0L9 805 aa10.85□□□□□ -0.67
ZNF540-204ENST00000586792 NUTM2FA1L443 756 aa10.83□□□□□ -0.68
ZNF540-204ENST00000586792 AVPP01185 164 aa10.83□□□□□ -0.68
ZNF540-204ENST00000586792 OATP04181 439 aa10.83□□□□□ -0.68
ZNF540-204ENST00000586792 AXIN1O15169 862 aa10.82□□□□□ -0.68
ZNF540-204ENST00000586792 WFS1O76024 890 aa10.82□□□□□ -0.68
ZNF540-204ENST00000586792 CTC1Q2NKJ3 1217 aa10.82□□□□□ -0.68
ZNF540-204ENST00000586792 CYP4X1Q8N118 509 aa10.81□□□□□ -0.68
ZNF540-204ENST00000586792 C11orf95C9JLR9 678 aaPredicted RBP10.8□□□□□ -0.68
ZNF540-204ENST00000586792 FCHSD2O94868 740 aa10.8□□□□□ -0.68
ZNF540-204ENST00000586792 FAM161AQ3B820 660 aa10.8□□□□□ -0.68
ZNF540-204ENST00000586792 TOR4AQ9NXH8 423 aa10.8□□□□□ -0.68
ZNF540-204ENST00000586792 PUS10Q3MIT2 529 aaKnown RBP10.78□□□□□ -0.68
ZNF540-204ENST00000586792 PXYLP1Q8TE99 480 aa10.78□□□□□ -0.68
ZNF540-204ENST00000586792 STK17AQ9UEE5 414 aa10.78□□□□□ -0.68
ZNF540-204ENST00000586792 SMCPP49901 116 aaPredicted RBP10.77□□□□□ -0.69
ZNF540-204ENST00000586792 GMPR2Q9P2T1 348 aaKnown RBP10.77□□□□□ -0.69
ZNF540-204ENST00000586792 INSM1Q01101 510 aaPredicted RBP10.76□□□□□ -0.69
ZNF540-204ENST00000586792 DACH1Q9UI36 760 aa10.76□□□□□ -0.69
ZNF540-204ENST00000586792 FCF1Q9Y324 198 aaKnown RBP10.75□□□□□ -0.69
ZNF540-204ENST00000586792 ZBTB24O43167 697 aaPredicted RBP10.73□□□□□ -0.69
ZNF540-204ENST00000586792 WIPF1O43516 503 aa10.73□□□□□ -0.69
ZNF540-204ENST00000586792 TTC24A2A3L6 582 aaPredicted RBP10.72□□□□□ -0.69
ZNF540-204ENST00000586792 FMNL1O95466 1100 aaPredicted RBP10.72□□□□□ -0.69
ZNF540-204ENST00000586792 NFX1Q12986 1120 aaKnown RBP10.71□□□□□ -0.69
ZNF540-204ENST00000586792 MORN1Q5T089 497 aa10.71□□□□□ -0.69
ZNF540-204ENST00000586792 KCNV2Q8TDN2 545 aa10.71□□□□□ -0.69
ZNF540-204ENST00000586792 ATP6V1AP38606 617 aa10.7□□□□□ -0.7
ZNF540-204ENST00000586792 METTL3Q86U44 580 aaKnown RBP10.7□□□□□ -0.7
ZNF540-204ENST00000586792 RDH13Q8NBN7 331 aa10.7□□□□□ -0.7
ZNF540-204ENST00000586792 SALL2Q9Y467 1007 aaPredicted RBP10.7□□□□□ -0.7
ZNF540-204ENST00000586792 HIC1Q14526 733 aa10.69□□□□□ -0.7
ZNF540-204ENST00000586792 THAP11Q96EK4 314 aa10.69□□□□□ -0.7
ZNF540-204ENST00000586792 DAXXQ9UER7 740 aaPredicted RBP10.68□□□□□ -0.7
ZNF540-204ENST00000586792 FUT2Q10981 343 aa10.67□□□□□ -0.7
ZNF540-204ENST00000586792 FAM160A2Q8N612 972 aaPredicted RBP10.67□□□□□ -0.7
ZNF540-204ENST00000586792 SENP2Q9HC62 589 aa10.67□□□□□ -0.7
ZNF540-204ENST00000586792 SNIP1Q8TAD8 396 aaKnown RBP10.66□□□□□ -0.7
ZNF540-204ENST00000586792 WNT7AO00755 349 aa10.65□□□□□ -0.7
ZNF540-204ENST00000586792 SLC27A5Q9Y2P5 690 aa10.65□□□□□ -0.7
ZNF540-204ENST00000586792 P3H3Q8IVL6 736 aa10.64□□□□□ -0.71
ZNF540-204ENST00000586792 SULF1Q8IWU6 871 aa10.64□□□□□ -0.71
ZNF540-204ENST00000586792 ATP13A2Q9NQ11 1180 aa10.64□□□□□ -0.71
ZNF540-204ENST00000586792 DDX11L8A8MPP1 907 aa10.63□□□□□ -0.71
ZNF540-204ENST00000586792 GRIPAP1Q4V328 841 aa10.63□□□□□ -0.71
ZNF540-204ENST00000586792 MSS51Q4VC12 460 aa10.63□□□□□ -0.71
ZNF540-204ENST00000586792 BRICD5Q6PL45 260 aa10.63□□□□□ -0.71
ZNF540-204ENST00000586792 TERTO14746 1132 aaKnown RBP10.62□□□□□ -0.71
ZNF540-204ENST00000586792 SMPD1P17405 629 aa10.61□□□□□ -0.71
ZNF540-204ENST00000586792 GCGRP47871 477 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms