RNA–Protein interactions for RNA: ENST00000586709.1

LAMA3-205, Transcript of laminin subunit alpha 3, humanhuman

TSL 3

Gene LAMA3, Length 637 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-205ENST00000586709 MED14O60244 1454 aa15.18■□□□□ 0.02
LAMA3-205ENST00000586709 ANKLE2Q86XL3 938 aa15.17■□□□□ 0.02
LAMA3-205ENST00000586709 SLIT1O75093 1534 aa15.17■□□□□ 0.02
LAMA3-205ENST00000586709 ARHGAP23Q9P227 1491 aa15.15■□□□□ 0.02
LAMA3-205ENST00000586709 ADGRB3O60242 1522 aa15.15■□□□□ 0.02
LAMA3-205ENST00000586709 NPHP4O75161 1426 aaPredicted RBP15.15■□□□□ 0.02
LAMA3-205ENST00000586709 IQSEC2Q5JU85 1478 aa15.14■□□□□ 0.01
LAMA3-205ENST00000586709 ZNF335Q9H4Z2 1342 aaPredicted RBP15.14■□□□□ 0.01
LAMA3-205ENST00000586709 KCNA4P22459 653 aa15.13■□□□□ 0.01
LAMA3-205ENST00000586709 SPHKAPQ2M3C7 1700 aa15.13■□□□□ 0.01
LAMA3-205ENST00000586709 SP7Q8TDD2 431 aaPredicted RBP15.13■□□□□ 0.01
LAMA3-205ENST00000586709 SCAF11Q99590 1463 aaKnown RBP15.13■□□□□ 0.01
LAMA3-205ENST00000586709 NUP155O75694 1391 aa15.12■□□□□ 0.01
LAMA3-205ENST00000586709 NAIPQ13075 1403 aa15.12■□□□□ 0.01
LAMA3-205ENST00000586709 IDI1Q13907 227 aa15.12■□□□□ 0.01
LAMA3-205ENST00000586709 STRCP1A6NGW2 1772 aa15.11■□□□□ 0.01
LAMA3-205ENST00000586709 TMEM131LA2VDJ0 1609 aa15.1■□□□□ 0.01
LAMA3-205ENST00000586709 SLC52A1Q9NWF4 448 aa15.1■□□□□ 0.01
LAMA3-205ENST00000586709 STAG3Q9UJ98 1225 aa15.1■□□□□ 0.01
LAMA3-205ENST00000586709 TMEM2Q9UHN6 1383 aa15.1■□□□□ 0.01
LAMA3-205ENST00000586709 HFM1A2PYH4 1435 aa15.09■□□□□ 0.01
LAMA3-205ENST00000586709 CPS1P31327 1500 aa15.09■□□□□ 0.01
LAMA3-205ENST00000586709 POLA2Q14181 598 aa15.08■□□□□ 0
LAMA3-205ENST00000586709 LTKP29376 864 aa15.07■□□□□ 0
LAMA3-205ENST00000586709 TXNDC2Q86VQ3 553 aa15.07■□□□□ 0
LAMA3-205ENST00000586709 EID1Q9Y6B2 187 aa15.07■□□□□ 0
LAMA3-205ENST00000586709 KIF1BO60333 1816 aa15.03■□□□□ -0
LAMA3-205ENST00000586709 ZFYVE9O95405 1425 aa15.02■□□□□ -0
LAMA3-205ENST00000586709 XIRP1Q702N8 1843 aaKnown RBP15.01□□□□□ -0.01
LAMA3-205ENST00000586709 TRPM2O94759 1503 aa15.01□□□□□ -0.01
LAMA3-205ENST00000586709 RIMS2Q9UQ26 1411 aa15□□□□□ -0.01
LAMA3-205ENST00000586709 CLTCL1P53675 1640 aa15□□□□□ -0.01
LAMA3-205ENST00000586709 CHD2O14647 1828 aaKnown RBP14.99□□□□□ -0.01
LAMA3-205ENST00000586709 LRRC7Q96NW7 1537 aa14.98□□□□□ -0.01
LAMA3-205ENST00000586709 CHGAP10645 457 aaKnown RBP14.98□□□□□ -0.01
LAMA3-205ENST00000586709 TRIM52Q96A61 297 aa14.98□□□□□ -0.01
LAMA3-205ENST00000586709 UBAP1LF5GYI3 381 aa14.97□□□□□ -0.01
LAMA3-205ENST00000586709 PLEKHG1Q9ULL1 1385 aa14.97□□□□□ -0.01
LAMA3-205ENST00000586709 HDGFP51858 240 aaKnown RBP14.96□□□□□ -0.01
LAMA3-205ENST00000586709 NWD1Q149M9 1564 aa14.96□□□□□ -0.01
LAMA3-205ENST00000586709 AKT1S1Q96B36 256 aa14.96□□□□□ -0.01
LAMA3-205ENST00000586709 DIP2AQ14689 1571 aa14.95□□□□□ -0.02
LAMA3-205ENST00000586709 PPP1R15AO75807 674 aaPredicted RBP14.95□□□□□ -0.02
LAMA3-205ENST00000586709 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.94□□□□□ -0.02
LAMA3-205ENST00000586709 ALKQ9UM73 1620 aa14.93□□□□□ -0.02
LAMA3-205ENST00000586709 SLC26A8Q96RN1 970 aa14.93□□□□□ -0.02
LAMA3-205ENST00000586709 SLC4A1APQ9BWU0 796 aaKnown RBP14.93□□□□□ -0.02
LAMA3-205ENST00000586709 MYCNP04198 464 aaPredicted RBP14.92□□□□□ -0.02
LAMA3-205ENST00000586709 BCANQ96GW7 911 aa14.92□□□□□ -0.02
LAMA3-205ENST00000586709 NRXN3Q9Y4C0 1643 aa14.92□□□□□ -0.02
LAMA3-205ENST00000586709 NKTRP30414 1462 aaKnown RBP14.91□□□□□ -0.02
LAMA3-205ENST00000586709 TOM1O60784 492 aa14.91□□□□□ -0.02
LAMA3-205ENST00000586709 NEXMIFQ5QGS0 1516 aa14.91□□□□□ -0.02
LAMA3-205ENST00000586709 SETD5Q9C0A6 1442 aa14.91□□□□□ -0.02
LAMA3-205ENST00000586709 KCNA6P17658 529 aa14.9□□□□□ -0.02
LAMA3-205ENST00000586709 PPLO60437 1756 aa14.9□□□□□ -0.02
LAMA3-205ENST00000586709 SETBP1Q9Y6X0 1596 aa14.9□□□□□ -0.02
LAMA3-205ENST00000586709 NUTM2DQ5VT03 806 aaPredicted RBP14.89□□□□□ -0.03
LAMA3-205ENST00000586709 ADAMTS13Q76LX8 1427 aa14.89□□□□□ -0.03
LAMA3-205ENST00000586709 ZNF326Q5BKZ1 582 aaKnown RBP14.88□□□□□ -0.03
LAMA3-205ENST00000586709 ACIN1Q9UKV3 1341 aaKnown RBP14.88□□□□□ -0.03
LAMA3-205ENST00000586709 TBX22Q9Y458 520 aa14.87□□□□□ -0.03
LAMA3-205ENST00000586709 PIP4K2BP78356 416 aa14.86□□□□□ -0.03
LAMA3-205ENST00000586709 IFT172Q9UG01 1749 aa14.86□□□□□ -0.03
LAMA3-205ENST00000586709 TMEM94Q12767 1356 aa14.85□□□□□ -0.03
LAMA3-205ENST00000586709 PIK3R4Q99570 1358 aa14.85□□□□□ -0.03
LAMA3-205ENST00000586709 MPHOSPH9Q99550 1183 aa14.85□□□□□ -0.03
LAMA3-205ENST00000586709 RAB3GAP2Q9H2M9 1393 aa14.85□□□□□ -0.03
LAMA3-205ENST00000586709 SETD1AO15047 1707 aaKnown RBP14.84□□□□□ -0.03
LAMA3-205ENST00000586709 XRN1Q8IZH2 1706 aaKnown RBP14.84□□□□□ -0.03
LAMA3-205ENST00000586709 PROSER2Q86WR7 435 aaPredicted RBP14.84□□□□□ -0.03
LAMA3-205ENST00000586709 CCDC144AA2RUR9 1427 aa14.83□□□□□ -0.04
LAMA3-205ENST00000586709 ZBTB12Q9Y330 459 aaPredicted RBP14.82□□□□□ -0.04
LAMA3-205ENST00000586709 PIP4P2Q8N4L2 257 aa14.81□□□□□ -0.04
LAMA3-205ENST00000586709 RBM33Q96EV2 1170 aaKnown RBP14.8□□□□□ -0.04
LAMA3-205ENST00000586709 PTPRUQ92729 1446 aa14.8□□□□□ -0.04
LAMA3-205ENST00000586709 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.8□□□□□ -0.04
LAMA3-205ENST00000586709 HSPA1LP34931 641 aa14.79□□□□□ -0.04
LAMA3-205ENST00000586709 MSH6P52701 1360 aa14.79□□□□□ -0.04
LAMA3-205ENST00000586709 RPGRIP1LQ68CZ1 1315 aa14.79□□□□□ -0.04
LAMA3-205ENST00000586709 ROBO1Q9Y6N7 1651 aa14.79□□□□□ -0.04
LAMA3-205ENST00000586709 NCOA3Q9Y6Q9 1424 aa14.79□□□□□ -0.04
LAMA3-205ENST00000586709 SPATA31E1Q6ZUB1 1445 aa14.78□□□□□ -0.04
LAMA3-205ENST00000586709 REM2Q8IYK8 340 aaPredicted RBP14.78□□□□□ -0.04
LAMA3-205ENST00000586709 VGFO15240 615 aaPredicted RBP14.77□□□□□ -0.05
LAMA3-205ENST00000586709 METP08581 1390 aa14.76□□□□□ -0.05
LAMA3-205ENST00000586709 AMOTL2Q9Y2J4 779 aa14.76□□□□□ -0.05
LAMA3-205ENST00000586709 HAX1O00165 279 aa14.75□□□□□ -0.05
LAMA3-205ENST00000586709 NALCNQ8IZF0 1738 aa14.75□□□□□ -0.05
LAMA3-205ENST00000586709 FAM135BQ49AJ0 1406 aa14.75□□□□□ -0.05
LAMA3-205ENST00000586709 HRCP23327 699 aa14.74□□□□□ -0.05
LAMA3-205ENST00000586709 RGL3Q3MIN7 710 aa14.72□□□□□ -0.05
LAMA3-205ENST00000586709 C14orf37Q86TY3 774 aa14.72□□□□□ -0.05
LAMA3-205ENST00000586709 PHLPP1O60346 1717 aa14.72□□□□□ -0.05
LAMA3-205ENST00000586709 ANKRD30BQ9BXX2 1392 aa14.72□□□□□ -0.05
LAMA3-205ENST00000586709 DISP3Q9P2K9 1392 aa14.72□□□□□ -0.05
LAMA3-205ENST00000586709 MED1Q15648 1581 aaPredicted RBP14.71□□□□□ -0.05
LAMA3-205ENST00000586709 KNDC1Q76NI1 1749 aa14.7□□□□□ -0.06
LAMA3-205ENST00000586709 DCCP43146 1447 aa14.7□□□□□ -0.06
LAMA3-205ENST00000586709 PTCH1Q13635 1447 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms