RNA–Protein interactions for RNA: ENST00000586375.1

RAD23A-202, Transcript of RAD23 homolog A, nucleotide excision repair protein, humanhuman

TSL 3

Gene RAD23A, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23A-202ENST00000586375 STAG3Q9UJ98 1225 aa23.8■■□□□ 1.4
RAD23A-202ENST00000586375 KDM5AP29375 1690 aaKnown RBP23.79■■□□□ 1.4
RAD23A-202ENST00000586375 TMEM131LA2VDJ0 1609 aa23.79■■□□□ 1.4
RAD23A-202ENST00000586375 ROCK1Q13464 1354 aa23.78■■□□□ 1.4
RAD23A-202ENST00000586375 NUTM2DQ5VT03 806 aaPredicted RBP23.78■■□□□ 1.4
RAD23A-202ENST00000586375 ZFYVE9O95405 1425 aa23.76■■□□□ 1.39
RAD23A-202ENST00000586375 RPRD2Q5VT52 1461 aaKnown RBP23.75■■□□□ 1.39
RAD23A-202ENST00000586375 EID1Q9Y6B2 187 aa23.73■■□□□ 1.39
RAD23A-202ENST00000586375 NUP155O75694 1391 aa23.72■■□□□ 1.39
RAD23A-202ENST00000586375 RIMS2Q9UQ26 1411 aa23.71■■□□□ 1.39
RAD23A-202ENST00000586375 TOM1O60784 492 aa23.71■■□□□ 1.39
RAD23A-202ENST00000586375 RRBP1Q9P2E9 1410 aaKnown RBP23.7■■□□□ 1.38
RAD23A-202ENST00000586375 CHGAP10645 457 aaKnown RBP23.7■■□□□ 1.38
RAD23A-202ENST00000586375 MED1Q15648 1581 aaPredicted RBP23.69■■□□□ 1.38
RAD23A-202ENST00000586375 TMEM94Q12767 1356 aa23.67■■□□□ 1.38
RAD23A-202ENST00000586375 NWD1Q149M9 1564 aa23.67■■□□□ 1.38
RAD23A-202ENST00000586375 SLC52A1Q9NWF4 448 aa23.67■■□□□ 1.38
RAD23A-202ENST00000586375 NAIPQ13075 1403 aa23.64■■□□□ 1.37
RAD23A-202ENST00000586375 SPHKAPQ2M3C7 1700 aa23.63■■□□□ 1.37
RAD23A-202ENST00000586375 ADAMTS13Q76LX8 1427 aa23.62■■□□□ 1.37
RAD23A-202ENST00000586375 BCANQ96GW7 911 aa23.62■■□□□ 1.37
RAD23A-202ENST00000586375 PLEKHG1Q9ULL1 1385 aa23.62■■□□□ 1.37
RAD23A-202ENST00000586375 CHD2O14647 1828 aaKnown RBP23.61■■□□□ 1.37
RAD23A-202ENST00000586375 KCNA6P17658 529 aa23.61■■□□□ 1.37
RAD23A-202ENST00000586375 CLTCL1P53675 1640 aa23.61■■□□□ 1.37
RAD23A-202ENST00000586375 NRXN3Q9Y4C0 1643 aa23.59■■□□□ 1.37
RAD23A-202ENST00000586375 PROSER2Q86WR7 435 aaPredicted RBP23.58■■□□□ 1.37
RAD23A-202ENST00000586375 PPP1R15AO75807 674 aaPredicted RBP23.57■■□□□ 1.36
RAD23A-202ENST00000586375 MAPK8IP2Q13387 824 aaPredicted RBP23.56■■□□□ 1.36
RAD23A-202ENST00000586375 ROBO1Q9Y6N7 1651 aa23.56■■□□□ 1.36
RAD23A-202ENST00000586375 PTPRUQ92729 1446 aa23.56■■□□□ 1.36
RAD23A-202ENST00000586375 KCNA4P22459 653 aa23.54■■□□□ 1.36
RAD23A-202ENST00000586375 NKTRP30414 1462 aaKnown RBP23.54■■□□□ 1.36
RAD23A-202ENST00000586375 SOCS7O14512 581 aa23.49■■□□□ 1.35
RAD23A-202ENST00000586375 TRPM2O94759 1503 aa23.48■■□□□ 1.35
RAD23A-202ENST00000586375 NEXMIFQ5QGS0 1516 aa23.48■■□□□ 1.35
RAD23A-202ENST00000586375 HFM1A2PYH4 1435 aa23.47■■□□□ 1.35
RAD23A-202ENST00000586375 TBX22Q9Y458 520 aa23.45■■□□□ 1.34
RAD23A-202ENST00000586375 FAM135BQ49AJ0 1406 aa23.44■■□□□ 1.34
RAD23A-202ENST00000586375 METP08581 1390 aa23.44■■□□□ 1.34
RAD23A-202ENST00000586375 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.44■■□□□ 1.34
RAD23A-202ENST00000586375 DIP2AQ14689 1571 aa23.44■■□□□ 1.34
RAD23A-202ENST00000586375 XRN1Q8IZH2 1706 aaKnown RBP23.43■■□□□ 1.34
RAD23A-202ENST00000586375 TRIM52Q96A61 297 aa23.43■■□□□ 1.34
RAD23A-202ENST00000586375 ZNF326Q5BKZ1 582 aaKnown RBP23.42■■□□□ 1.34
RAD23A-202ENST00000586375 RGS17Q9UGC6 210 aaPredicted RBP23.42■■□□□ 1.34
RAD23A-202ENST00000586375 SETBP1Q9Y6X0 1596 aa23.42■■□□□ 1.34
RAD23A-202ENST00000586375 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.41■■□□□ 1.34
RAD23A-202ENST00000586375 MSH6P52701 1360 aa23.4■■□□□ 1.34
RAD23A-202ENST00000586375 PHLPP1O60346 1717 aa23.39■■□□□ 1.34
RAD23A-202ENST00000586375 KIF1BO60333 1816 aa23.39■■□□□ 1.33
RAD23A-202ENST00000586375 AMOTL2Q9Y2J4 779 aa23.39■■□□□ 1.33
RAD23A-202ENST00000586375 NCBP3Q53F19 620 aaKnown RBP23.38■■□□□ 1.33
RAD23A-202ENST00000586375 SETD1AO15047 1707 aaKnown RBP23.38■■□□□ 1.33
RAD23A-202ENST00000586375 SLAIN2Q9P270 581 aa23.36■■□□□ 1.33
RAD23A-202ENST00000586375 COL16A1Q07092 1604 aaPredicted RBP23.36■■□□□ 1.33
RAD23A-202ENST00000586375 CNKSR2Q8WXI2 1034 aa23.35■■□□□ 1.33
RAD23A-202ENST00000586375 HDGFP51858 240 aaKnown RBP23.34■■□□□ 1.33
RAD23A-202ENST00000586375 C14orf37Q86TY3 774 aa23.34■■□□□ 1.33
RAD23A-202ENST00000586375 SLC4A1APQ9BWU0 796 aaKnown RBP23.33■■□□□ 1.33
RAD23A-202ENST00000586375 NALCNQ8IZF0 1738 aa23.33■■□□□ 1.32
RAD23A-202ENST00000586375 PPLO60437 1756 aa23.31■■□□□ 1.32
RAD23A-202ENST00000586375 PIK3R4Q99570 1358 aa23.3■■□□□ 1.32
RAD23A-202ENST00000586375 LRP6O75581 1613 aa23.29■■□□□ 1.32
RAD23A-202ENST00000586375 DDX17Q92841 729 aaKnown RBP23.28■■□□□ 1.32
RAD23A-202ENST00000586375 POTEAQ6S8J7 498 aa23.26■■□□□ 1.31
RAD23A-202ENST00000586375 MST1RQ04912 1400 aa23.25■■□□□ 1.31
RAD23A-202ENST00000586375 BRINP3Q76B58 766 aa23.24■■□□□ 1.31
RAD23A-202ENST00000586375 C19orf44Q9H6X5 657 aa23.24■■□□□ 1.31
RAD23A-202ENST00000586375 ROBO2Q9HCK4 1378 aa23.24■■□□□ 1.31
RAD23A-202ENST00000586375 NCOA3Q9Y6Q9 1424 aa23.24■■□□□ 1.31
RAD23A-202ENST00000586375 AHDC1Q5TGY3 1603 aaPredicted RBP23.23■■□□□ 1.31
RAD23A-202ENST00000586375 ADGRF5Q8IZF2 1346 aa23.22■■□□□ 1.31
RAD23A-202ENST00000586375 ASXL1Q8IXJ9 1541 aa23.22■■□□□ 1.31
RAD23A-202ENST00000586375 ATF3P18847 181 aa23.21■■□□□ 1.31
RAD23A-202ENST00000586375 MPHOSPH9Q99550 1183 aa23.21■■□□□ 1.31
RAD23A-202ENST00000586375 IFT172Q9UG01 1749 aa23.21■■□□□ 1.31
RAD23A-202ENST00000586375 SPATA31E1Q6ZUB1 1445 aa23.19■■□□□ 1.3
RAD23A-202ENST00000586375 ADGRL3Q9HAR2 1447 aa23.19■■□□□ 1.3
RAD23A-202ENST00000586375 RGL3Q3MIN7 710 aa23.19■■□□□ 1.3
RAD23A-202ENST00000586375 CADPS2Q86UW7 1296 aa23.18■■□□□ 1.3
RAD23A-202ENST00000586375 JCADQ9P266 1359 aa23.17■■□□□ 1.3
RAD23A-202ENST00000586375 NHSL1Q5SYE7 1610 aa23.17■■□□□ 1.3
RAD23A-202ENST00000586375 SHPRHQ149N8 1683 aa23.15■■□□□ 1.3
RAD23A-202ENST00000586375 DCCP43146 1447 aa23.14■■□□□ 1.29
RAD23A-202ENST00000586375 CCDC144AA2RUR9 1427 aa23.13■■□□□ 1.29
RAD23A-202ENST00000586375 PTCH1Q13635 1447 aa23.12■■□□□ 1.29
RAD23A-202ENST00000586375 SETD5Q9C0A6 1442 aa23.12■■□□□ 1.29
RAD23A-202ENST00000586375 RAB3GAP2Q9H2M9 1393 aa23.12■■□□□ 1.29
RAD23A-202ENST00000586375 PLEKHH1Q9ULM0 1364 aa23.11■■□□□ 1.29
RAD23A-202ENST00000586375 VGFO15240 615 aaPredicted RBP23.1■■□□□ 1.29
RAD23A-202ENST00000586375 TMEM132EQ6IEE7 984 aa23.1■■□□□ 1.29
RAD23A-202ENST00000586375 C1orf167Q5SNV9 1468 aa23.1■■□□□ 1.29
RAD23A-202ENST00000586375 NPM3O75607 178 aaKnown RBP23.09■■□□□ 1.29
RAD23A-202ENST00000586375 ORAI2Q96SN7 254 aa23.09■■□□□ 1.29
RAD23A-202ENST00000586375 STK26Q9P289 416 aa23.09■■□□□ 1.29
RAD23A-202ENST00000586375 NUTM2BA6NNL0 878 aaPredicted RBP23.08■■□□□ 1.29
RAD23A-202ENST00000586375 NUTM2EB1AL46 878 aaPredicted RBP23.08■■□□□ 1.29
RAD23A-202ENST00000586375 NUTM2AQ8IVF1 878 aaPredicted RBP23.08■■□□□ 1.29
RAD23A-202ENST00000586375 WAPLQ7Z5K2 1190 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms